RNA–Protein interactions for RNA: ENST00000524419.5

LDLRAD3-202, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 5 BASIC

Gene LDLRAD3, Length 1,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-202ENST00000524419 PTPRMP28827 1452 aa18.23■□□□□ 0.51
LDLRAD3-202ENST00000524419 CDCA7LQ96GN5 454 aa18.23■□□□□ 0.51
LDLRAD3-202ENST00000524419 SLC12A5Q9H2X9 1139 aa18.23■□□□□ 0.51
LDLRAD3-202ENST00000524419 YTHDC2Q9H6S0 1430 aaKnown RBP18.22■□□□□ 0.51
LDLRAD3-202ENST00000524419 A2ML1A8K2U0 1454 aa18.21■□□□□ 0.51
LDLRAD3-202ENST00000524419 STK26Q9P289 416 aa18.21■□□□□ 0.51
LDLRAD3-202ENST00000524419 ANKRD36BQ8N2N9 1353 aa18.21■□□□□ 0.51
LDLRAD3-202ENST00000524419 MORC1Q86VD1 984 aa18.21■□□□□ 0.5
LDLRAD3-202ENST00000524419 POLR3AO14802 1390 aaPredicted RBP18.2■□□□□ 0.5
LDLRAD3-202ENST00000524419 NINLQ9Y2I6 1382 aa18.2■□□□□ 0.5
LDLRAD3-202ENST00000524419 MLECQ14165 292 aa18.2■□□□□ 0.5
LDLRAD3-202ENST00000524419 CGNL1Q0VF96 1302 aa18.2■□□□□ 0.5
LDLRAD3-202ENST00000524419 PLEKHH1Q9ULM0 1364 aa18.19■□□□□ 0.5
LDLRAD3-202ENST00000524419 SHPRHQ149N8 1683 aa18.19■□□□□ 0.5
LDLRAD3-202ENST00000524419 NSD2O96028 1365 aa18.19■□□□□ 0.5
LDLRAD3-202ENST00000524419 SETD1AO15047 1707 aaKnown RBP18.18■□□□□ 0.5
LDLRAD3-202ENST00000524419 SAFB2Q14151 953 aaKnown RBP eCLIP18.18■□□□□ 0.53e-6■□□□□ 11.2
LDLRAD3-202ENST00000524419 CCDC136Q96JN2 1154 aa18.18■□□□□ 0.5
LDLRAD3-202ENST00000524419 SENP3Q9H4L4 574 aaPredicted RBP18.18■□□□□ 0.5
LDLRAD3-202ENST00000524419 RIMS2Q9UQ26 1411 aa18.18■□□□□ 0.5
LDLRAD3-202ENST00000524419 CABP2Q9NPB3 220 aa18.17■□□□□ 0.5
LDLRAD3-202ENST00000524419 ESF1Q9H501 851 aaKnown RBP18.17■□□□□ 0.5
LDLRAD3-202ENST00000524419 ZNF521Q96K83 1311 aa18.16■□□□□ 0.5
LDLRAD3-202ENST00000524419 DLC1Q96QB1 1528 aa18.16■□□□□ 0.5
LDLRAD3-202ENST00000524419 ATAD2Q6PL18 1390 aa18.16■□□□□ 0.5
LDLRAD3-202ENST00000524419 CCDC146Q8IYE0 955 aa18.15■□□□□ 0.5
LDLRAD3-202ENST00000524419 PRAM1Q96QH2 718 aa18.15■□□□□ 0.5
LDLRAD3-202ENST00000524419 POGKQ9P215 609 aa18.15■□□□□ 0.5
LDLRAD3-202ENST00000524419 SRPK2P78362 688 aaKnown RBP18.15■□□□□ 0.5
LDLRAD3-202ENST00000524419 MSH5O43196 834 aa18.14■□□□□ 0.49
LDLRAD3-202ENST00000524419 ANKRD26Q9UPS8 1709 aa18.14■□□□□ 0.49
LDLRAD3-202ENST00000524419 GOLGA2Q08379 1002 aa18.13■□□□□ 0.49
LDLRAD3-202ENST00000524419 MINK1Q8N4C8 1332 aaPredicted RBP18.13■□□□□ 0.49
LDLRAD3-202ENST00000524419 NGEFQ8N5V2 710 aa18.12■□□□□ 0.49
LDLRAD3-202ENST00000524419 TNNT2P45379 298 aaPredicted RBP18.11■□□□□ 0.49
LDLRAD3-202ENST00000524419 A0A1W2PP64 1363 aa18.11■□□□□ 0.49
LDLRAD3-202ENST00000524419 ZMYM3Q14202 1370 aa18.11■□□□□ 0.49
LDLRAD3-202ENST00000524419 ABCC11Q96J66 1382 aa18.11■□□□□ 0.49
LDLRAD3-202ENST00000524419 NRXN3Q9Y4C0 1643 aa18.11■□□□□ 0.49
LDLRAD3-202ENST00000524419 APAF1O14727 1248 aa18.1■□□□□ 0.49
LDLRAD3-202ENST00000524419 DUSP27Q5VZP5 1158 aa18.1■□□□□ 0.49
LDLRAD3-202ENST00000524419 EXOC6Q8TAG9 804 aa18.1■□□□□ 0.49
LDLRAD3-202ENST00000524419 CFAP53Q96M91 514 aa18.1■□□□□ 0.49
LDLRAD3-202ENST00000524419 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.09■□□□□ 0.49
LDLRAD3-202ENST00000524419 KIF20BQ96Q89 1820 aa18.09■□□□□ 0.49
LDLRAD3-202ENST00000524419 TERF2IPQ9NYB0 399 aa18.08■□□□□ 0.49
LDLRAD3-202ENST00000524419 SLFN5Q08AF3 891 aa18.08■□□□□ 0.48
LDLRAD3-202ENST00000524419 KNDC1Q76NI1 1749 aa18.07■□□□□ 0.48
LDLRAD3-202ENST00000524419 TNRQ92752 1358 aa18.07■□□□□ 0.48
LDLRAD3-202ENST00000524419 CD163L1Q9NR16 1453 aa18.06■□□□□ 0.48
LDLRAD3-202ENST00000524419 UBR1Q8IWV7 1749 aa18.06■□□□□ 0.48
LDLRAD3-202ENST00000524419 MED14O60244 1454 aa18.06■□□□□ 0.48
LDLRAD3-202ENST00000524419 MTHFSP49914 203 aa18.06■□□□□ 0.48
LDLRAD3-202ENST00000524419 CDK19Q9BWU1 502 aa18.05■□□□□ 0.48
LDLRAD3-202ENST00000524419 IQSEC2Q5JU85 1478 aa18.05■□□□□ 0.48
LDLRAD3-202ENST00000524419 HDGFL2Q7Z4V5 671 aaPredicted RBP18.04■□□□□ 0.48
LDLRAD3-202ENST00000524419 NKTRP30414 1462 aaKnown RBP18.04■□□□□ 0.48
LDLRAD3-202ENST00000524419 PLIN1O60240 522 aa18.04■□□□□ 0.48
LDLRAD3-202ENST00000524419 TRMT2AQ8IZ69 625 aaKnown RBP18.04■□□□□ 0.48
LDLRAD3-202ENST00000524419 E9PSI1 815 aa18.03■□□□□ 0.48
LDLRAD3-202ENST00000524419 HDGFP51858 240 aaKnown RBP18.03■□□□□ 0.48
LDLRAD3-202ENST00000524419 RUNDC1Q96C34 613 aa18.03■□□□□ 0.48
LDLRAD3-202ENST00000524419 ATP7BP35670 1465 aa18.02■□□□□ 0.48
LDLRAD3-202ENST00000524419 ERICH6Q7L0X2 663 aa18.02■□□□□ 0.47
LDLRAD3-202ENST00000524419 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.01■□□□□ 0.47
LDLRAD3-202ENST00000524419 NLRP1Q9C000 1473 aa18.01■□□□□ 0.47
LDLRAD3-202ENST00000524419 CRBNQ96SW2 442 aa18■□□□□ 0.47
LDLRAD3-202ENST00000524419 CPS1P31327 1500 aa17.99■□□□□ 0.47
LDLRAD3-202ENST00000524419 WAPLQ7Z5K2 1190 aa17.99■□□□□ 0.47
LDLRAD3-202ENST00000524419 GGNBP2Q9H3C7 697 aa17.99■□□□□ 0.47
LDLRAD3-202ENST00000524419 METP08581 1390 aa17.99■□□□□ 0.47
LDLRAD3-202ENST00000524419 TMEM2Q9UHN6 1383 aa17.98■□□□□ 0.47
LDLRAD3-202ENST00000524419 SPINK5Q9NQ38 1064 aaPredicted RBP17.98■□□□□ 0.47
LDLRAD3-202ENST00000524419 ADGRB2O60241 1585 aa17.98■□□□□ 0.47
LDLRAD3-202ENST00000524419 TECPR2O15040 1411 aa17.98■□□□□ 0.47
LDLRAD3-202ENST00000524419 COL3A1P02461 1466 aaPredicted RBP17.97■□□□□ 0.47
LDLRAD3-202ENST00000524419 WWC1Q8IX03 1113 aa17.97■□□□□ 0.47
LDLRAD3-202ENST00000524419 CABP1Q9NZU7 370 aa17.97■□□□□ 0.47
LDLRAD3-202ENST00000524419 FAM135BQ49AJ0 1406 aa17.97■□□□□ 0.47
LDLRAD3-202ENST00000524419 FYB1O15117 783 aa17.97■□□□□ 0.47
LDLRAD3-202ENST00000524419 TCP11L2Q8N4U5 519 aa17.96■□□□□ 0.47
LDLRAD3-202ENST00000524419 U2AF1L5P0DN76 240 aaPredicted RBP17.95■□□□□ 0.46
LDLRAD3-202ENST00000524419 U2AF1Q01081 240 aaKnown RBP eCLIP17.95■□□□□ 0.46
LDLRAD3-202ENST00000524419 DMRT2Q9Y5R5 561 aa17.95■□□□□ 0.46
LDLRAD3-202ENST00000524419 FER1L4A9Z1Z3 1794 aa17.95■□□□□ 0.46
LDLRAD3-202ENST00000524419 C3P01024 1663 aa17.94■□□□□ 0.46
LDLRAD3-202ENST00000524419 C20orf194Q5TEA3 1177 aa17.94■□□□□ 0.46
LDLRAD3-202ENST00000524419 SIRT1Q96EB6 747 aa17.94■□□□□ 0.46
LDLRAD3-202ENST00000524419 ITSN1Q15811 1721 aa17.94■□□□□ 0.46
LDLRAD3-202ENST00000524419 WASLO00401 505 aaPredicted RBP17.93■□□□□ 0.46
LDLRAD3-202ENST00000524419 NCBP3Q53F19 620 aaKnown RBP17.93■□□□□ 0.46
LDLRAD3-202ENST00000524419 CCDC27Q2M243 656 aa17.93■□□□□ 0.46
LDLRAD3-202ENST00000524419 RRP7AQ9Y3A4 280 aaKnown RBP17.93■□□□□ 0.46
LDLRAD3-202ENST00000524419 PPIP5K1Q6PFW1 1433 aa17.92■□□□□ 0.46
LDLRAD3-202ENST00000524419 NEUROD2Q15784 382 aa17.92■□□□□ 0.46
LDLRAD3-202ENST00000524419 WDR63Q8IWG1 891 aa17.92■□□□□ 0.46
LDLRAD3-202ENST00000524419 PHF23Q9BUL5 403 aaPredicted RBP17.92■□□□□ 0.46
LDLRAD3-202ENST00000524419 CDC42BPGQ6DT37 1551 aa17.92■□□□□ 0.46
LDLRAD3-202ENST00000524419 MON2Q7Z3U7 1717 aa17.92■□□□□ 0.46
LDLRAD3-202ENST00000524419 TCERG1O14776 1098 aaKnown RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms