RNA–Protein interactions for RNA: ENST00000524291.1

VDAC3-212, Transcript of voltage dependent anion channel 3, humanhuman

TSL 2

Gene VDAC3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC3-212ENST00000524291 NFX1Q12986 1120 aaKnown RBP10.56□□□□□ -0.72
VDAC3-212ENST00000524291 RNF19BQ6ZMZ0 732 aa10.56□□□□□ -0.72
VDAC3-212ENST00000524291 SNIP1Q8TAD8 396 aaKnown RBP10.56□□□□□ -0.72
VDAC3-212ENST00000524291 STK17AQ9UEE5 414 aa10.56□□□□□ -0.72
VDAC3-212ENST00000524291 TESPA1A2RU30 521 aaPredicted RBP10.55□□□□□ -0.72
VDAC3-212ENST00000524291 SMPD1P17405 629 aa10.54□□□□□ -0.72
VDAC3-212ENST00000524291 INSM1Q01101 510 aaPredicted RBP10.54□□□□□ -0.72
VDAC3-212ENST00000524291 ATP13A2Q9NQ11 1180 aa10.54□□□□□ -0.72
VDAC3-212ENST00000524291 TRIM32Q13049 653 aa10.53□□□□□ -0.72
VDAC3-212ENST00000524291 Q3C1V9 767 aa10.53□□□□□ -0.72
VDAC3-212ENST00000524291 GPR37O15354 613 aa10.52□□□□□ -0.73
VDAC3-212ENST00000524291 WIPF1O43516 503 aa10.52□□□□□ -0.73
VDAC3-212ENST00000524291 SENP2Q9HC62 589 aa10.52□□□□□ -0.73
VDAC3-212ENST00000524291 SNRPBP14678 240 aaKnown RBP10.51□□□□□ -0.73
VDAC3-212ENST00000524291 MRGPRX2Q96LB1 330 aa10.51□□□□□ -0.73
VDAC3-212ENST00000524291 PHOX2BQ99453 314 aa10.51□□□□□ -0.73
VDAC3-212ENST00000524291 J3QL48 77 aa10.5□□□□□ -0.73
VDAC3-212ENST00000524291 TRIM47Q96LD4 638 aa10.49□□□□□ -0.73
VDAC3-212ENST00000524291 REPIN1Q9BWE0 567 aaKnown RBP10.49□□□□□ -0.73
VDAC3-212ENST00000524291 TERTO14746 1132 aaKnown RBP10.48□□□□□ -0.73
VDAC3-212ENST00000524291 MMP16P51512 607 aa10.48□□□□□ -0.73
VDAC3-212ENST00000524291 HPS1Q92902 700 aa10.46□□□□□ -0.73
VDAC3-212ENST00000524291 USB1Q9BQ65 265 aaKnown RBP10.46□□□□□ -0.73
VDAC3-212ENST00000524291 CCDC24Q8N4L8 307 aa10.45□□□□□ -0.74
VDAC3-212ENST00000524291 KIFC2Q96AC6 838 aa10.45□□□□□ -0.74
VDAC3-212ENST00000524291 DXOO77932 396 aaKnown RBP10.44□□□□□ -0.74
VDAC3-212ENST00000524291 LCE2CQ5TA81 110 aa10.42□□□□□ -0.74
VDAC3-212ENST00000524291 RC3H1Q5TC82 1133 aaKnown RBP10.42□□□□□ -0.74
VDAC3-212ENST00000524291 GPIHBP1Q8IV16 184 aa10.42□□□□□ -0.74
VDAC3-212ENST00000524291 KDM4AO75164 1064 aa10.41□□□□□ -0.74
VDAC3-212ENST00000524291 CD46P15529 392 aa10.41□□□□□ -0.74
VDAC3-212ENST00000524291 WNT7BP56706 349 aa10.4□□□□□ -0.74
VDAC3-212ENST00000524291 ALDH1A1P00352 501 aa10.38□□□□□ -0.75
VDAC3-212ENST00000524291 SKOR1P84550 965 aa10.38□□□□□ -0.75
VDAC3-212ENST00000524291 SLC16A10Q8TF71 515 aa10.38□□□□□ -0.75
VDAC3-212ENST00000524291 USP46P62068 366 aa10.37□□□□□ -0.75
VDAC3-212ENST00000524291 HLA-CQ95604 372 aa10.36□□□□□ -0.75
VDAC3-212ENST00000524291 FAM181BA6NEQ2 426 aa10.34□□□□□ -0.75
VDAC3-212ENST00000524291 NXF1Q9UBU9 619 aaKnown RBP10.33□□□□□ -0.76
VDAC3-212ENST00000524291 HOXA2O43364 376 aa10.32□□□□□ -0.76
VDAC3-212ENST00000524291 JUNDP17535 347 aa10.32□□□□□ -0.76
VDAC3-212ENST00000524291 MDM2Q00987 491 aaPredicted RBP10.32□□□□□ -0.76
VDAC3-212ENST00000524291 MAP2K5Q13163 448 aa10.32□□□□□ -0.76
VDAC3-212ENST00000524291 EHBP1Q8NDI1 1231 aa10.32□□□□□ -0.76
VDAC3-212ENST00000524291 WASF2Q9Y6W5 498 aa10.31□□□□□ -0.76
VDAC3-212ENST00000524291 CAPN5O15484 640 aaPredicted RBP10.29□□□□□ -0.76
VDAC3-212ENST00000524291 BMP1P13497 986 aa10.29□□□□□ -0.76
VDAC3-212ENST00000524291 GUCA2AQ02747 115 aa10.29□□□□□ -0.76
VDAC3-212ENST00000524291 IRF7Q92985 503 aa10.29□□□□□ -0.76
VDAC3-212ENST00000524291 NUDT12Q9BQG2 462 aa10.29□□□□□ -0.76
VDAC3-212ENST00000524291 GMPRP36959 345 aa10.28□□□□□ -0.76
VDAC3-212ENST00000524291 SYMPKQ92797 1274 aaKnown RBP10.28□□□□□ -0.76
VDAC3-212ENST00000524291 IRF6O14896 467 aa10.27□□□□□ -0.77
VDAC3-212ENST00000524291 SIAH2O43255 324 aa10.27□□□□□ -0.77
VDAC3-212ENST00000524291 TRIM46Q7Z4K8 759 aa10.27□□□□□ -0.77
VDAC3-212ENST00000524291 ZSCAN1Q8NBB4 408 aa10.27□□□□□ -0.77
VDAC3-212ENST00000524291 PTCRAQ6ISU1 281 aaPredicted RBP10.26□□□□□ -0.77
VDAC3-212ENST00000524291 NPAS3Q8IXF0 933 aa10.26□□□□□ -0.77
VDAC3-212ENST00000524291 RETREG3Q86VR2 466 aa10.25□□□□□ -0.77
VDAC3-212ENST00000524291 NUTM1Q86Y26 1132 aa10.25□□□□□ -0.77
VDAC3-212ENST00000524291 VEGFBP49765 207 aa10.24□□□□□ -0.77
VDAC3-212ENST00000524291 MINK1Q8N4C8 1332 aaPredicted RBP10.23□□□□□ -0.77
VDAC3-212ENST00000524291 H3BM21 787 aa10.21□□□□□ -0.77
VDAC3-212ENST00000524291 MS4A1P11836 297 aa10.21□□□□□ -0.77
VDAC3-212ENST00000524291 CLCN1P35523 988 aa10.21□□□□□ -0.77
VDAC3-212ENST00000524291 SH3BP2P78314 561 aa10.21□□□□□ -0.77
VDAC3-212ENST00000524291 GPCPD1Q9NPB8 672 aa10.21□□□□□ -0.77
VDAC3-212ENST00000524291 C6orf229H3BNL8 230 aa10.2□□□□□ -0.78
VDAC3-212ENST00000524291 TULP1O00294 542 aaPredicted RBP10.2□□□□□ -0.78
VDAC3-212ENST00000524291 CCNYL3P0C7X3 344 aa10.2□□□□□ -0.78
VDAC3-212ENST00000524291 FAM217BQ9NTX9 383 aaPredicted RBP10.2□□□□□ -0.78
VDAC3-212ENST00000524291 FDX1P10109 184 aa10.19□□□□□ -0.78
VDAC3-212ENST00000524291 PLCB2Q00722 1185 aa10.19□□□□□ -0.78
VDAC3-212ENST00000524291 KRI1Q8N9T8 703 aaKnown RBP10.19□□□□□ -0.78
VDAC3-212ENST00000524291 CCDC102AQ96A19 550 aa10.19□□□□□ -0.78
VDAC3-212ENST00000524291 ZFP42Q96MM3 310 aa10.19□□□□□ -0.78
VDAC3-212ENST00000524291 LORP23490 312 aaPredicted RBP10.18□□□□□ -0.78
VDAC3-212ENST00000524291 ERBB4Q15303 1308 aa10.17□□□□□ -0.78
VDAC3-212ENST00000524291 LINC01559Q495D7 138 aa10.17□□□□□ -0.78
VDAC3-212ENST00000524291 PLEKHG3A1L390 1219 aa10.16□□□□□ -0.78
VDAC3-212ENST00000524291 UNC93B1Q9H1C4 597 aa10.16□□□□□ -0.78
VDAC3-212ENST00000524291 TLL2Q9Y6L7 1015 aa10.16□□□□□ -0.78
VDAC3-212ENST00000524291 PTPRNQ16849 979 aa10.15□□□□□ -0.78
VDAC3-212ENST00000524291 BAP1Q92560 729 aa10.15□□□□□ -0.78
VDAC3-212ENST00000524291 PCDHGC3Q9UN70 934 aa10.15□□□□□ -0.78
VDAC3-212ENST00000524291 SCARF1Q14162 830 aa10.14□□□□□ -0.79
VDAC3-212ENST00000524291 EVA1BQ9NVM1 165 aa10.14□□□□□ -0.79
VDAC3-212ENST00000524291 VARSP26640 1264 aaKnown RBP10.13□□□□□ -0.79
VDAC3-212ENST00000524291 NNTQ13423 1086 aa10.13□□□□□ -0.79
VDAC3-212ENST00000524291 MRPL14Q6P1L8 145 aaKnown RBP10.13□□□□□ -0.79
VDAC3-212ENST00000524291 KCNH2Q12809 1159 aa10.12□□□□□ -0.79
VDAC3-212ENST00000524291 ZNF511Q8NB15 262 aa10.11□□□□□ -0.79
VDAC3-212ENST00000524291 PURBQ96QR8 312 aaKnown RBP10.11□□□□□ -0.79
VDAC3-212ENST00000524291 WDR4P57081 412 aaKnown RBP10.1□□□□□ -0.79
VDAC3-212ENST00000524291 MPNDQ8N594 471 aa10.1□□□□□ -0.79
VDAC3-212ENST00000524291 ADH1CP00326 375 aa10.09□□□□□ -0.79
VDAC3-212ENST00000524291 PRR7Q8TB68 274 aa10.09□□□□□ -0.79
VDAC3-212ENST00000524291 TIMP2P16035 220 aa10.08□□□□□ -0.8
VDAC3-212ENST00000524291 SPIRE2Q8WWL2 714 aa10.08□□□□□ -0.8
VDAC3-212ENST00000524291 SOBPA7XYQ1 873 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms