RNA–Protein interactions for RNA: ENST00000524049.5

CCNC-218, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-218ENST00000524049 NEXMIFQ5QGS0 1516 aa17.52■□□□□ 0.4
CCNC-218ENST00000524049 ORAI2Q96SN7 254 aa17.52■□□□□ 0.4
CCNC-218ENST00000524049 PRAG1Q86YV5 1406 aa17.5■□□□□ 0.39
CCNC-218ENST00000524049 NCBP3Q53F19 620 aaKnown RBP17.5■□□□□ 0.39
CCNC-218ENST00000524049 CCDC125Q86Z20 511 aa17.5■□□□□ 0.39
CCNC-218ENST00000524049 HFM1A2PYH4 1435 aa17.49■□□□□ 0.39
CCNC-218ENST00000524049 LAMC1P11047 1609 aa17.49■□□□□ 0.39
CCNC-218ENST00000524049 ROBO2Q9HCK4 1378 aa17.49■□□□□ 0.39
CCNC-218ENST00000524049 NPHP3Q7Z494 1330 aa17.48■□□□□ 0.39
CCNC-218ENST00000524049 NALCNQ8IZF0 1738 aa17.47■□□□□ 0.39
CCNC-218ENST00000524049 ZRANB1Q9UGI0 708 aa17.47■□□□□ 0.39
CCNC-218ENST00000524049 CLTCL1P53675 1640 aa17.47■□□□□ 0.39
CCNC-218ENST00000524049 C1QBPQ07021 282 aaKnown RBP17.46■□□□□ 0.39
CCNC-218ENST00000524049 ATRNO75882 1429 aa17.46■□□□□ 0.39
CCNC-218ENST00000524049 LRPPRCP42704 1394 aaKnown RBP17.45■□□□□ 0.38
CCNC-218ENST00000524049 ESCO1Q5FWF5 840 aa17.44■□□□□ 0.38
CCNC-218ENST00000524049 NAIPQ13075 1403 aa17.41■□□□□ 0.38
CCNC-218ENST00000524049 GJD4Q96KN9 370 aaPredicted RBP17.41■□□□□ 0.38
CCNC-218ENST00000524049 KIF1BO60333 1816 aa17.41■□□□□ 0.38
CCNC-218ENST00000524049 MYOM2P54296 1465 aa17.41■□□□□ 0.38
CCNC-218ENST00000524049 COL22A1Q8NFW1 1626 aaPredicted RBP17.4■□□□□ 0.38
CCNC-218ENST00000524049 SLC4A1APQ9BWU0 796 aaKnown RBP17.4■□□□□ 0.38
CCNC-218ENST00000524049 BCL9LQ86UU0 1499 aa17.39■□□□□ 0.37
CCNC-218ENST00000524049 FOXO3O43524 673 aa17.39■□□□□ 0.37
CCNC-218ENST00000524049 PPARGC1BQ86YN6 1023 aaKnown RBP17.38■□□□□ 0.37
CCNC-218ENST00000524049 RRBP1Q9P2E9 1410 aaKnown RBP17.38■□□□□ 0.37
CCNC-218ENST00000524049 PXDNQ92626 1479 aa17.37■□□□□ 0.37
CCNC-218ENST00000524049 CDC42BPGQ6DT37 1551 aa17.36■□□□□ 0.37
CCNC-218ENST00000524049 UNC5CLQ8IV45 518 aa17.36■□□□□ 0.37
CCNC-218ENST00000524049 TECPR2O15040 1411 aa17.33■□□□□ 0.36
CCNC-218ENST00000524049 ABCC11Q96J66 1382 aa17.33■□□□□ 0.36
CCNC-218ENST00000524049 ANKRD30BQ9BXX2 1392 aa17.33■□□□□ 0.36
CCNC-218ENST00000524049 XPCQ01831 940 aaPredicted RBP17.33■□□□□ 0.36
CCNC-218ENST00000524049 SPATA31A3Q5VYP0 1347 aa17.32■□□□□ 0.36
CCNC-218ENST00000524049 ADGRF5Q8IZF2 1346 aa17.32■□□□□ 0.36
CCNC-218ENST00000524049 WAPLQ7Z5K2 1190 aa17.32■□□□□ 0.36
CCNC-218ENST00000524049 SIRT1Q96EB6 747 aa17.32■□□□□ 0.36
CCNC-218ENST00000524049 STK26Q9P289 416 aa17.32■□□□□ 0.36
CCNC-218ENST00000524049 BLMP54132 1417 aaPredicted RBP17.31■□□□□ 0.36
CCNC-218ENST00000524049 NUTM2FA1L443 756 aa17.3■□□□□ 0.36
CCNC-218ENST00000524049 PSME1Q06323 249 aa17.3■□□□□ 0.36
CCNC-218ENST00000524049 SF3B2Q13435 895 aaKnown RBP17.3■□□□□ 0.36
CCNC-218ENST00000524049 SLIT2O94813 1529 aa17.3■□□□□ 0.36
CCNC-218ENST00000524049 CCDC144AA2RUR9 1427 aa17.3■□□□□ 0.36
CCNC-218ENST00000524049 KRT28Q7Z3Y7 464 aa17.29■□□□□ 0.36
CCNC-218ENST00000524049 PPLO60437 1756 aa17.28■□□□□ 0.36
CCNC-218ENST00000524049 HAP1P54257 671 aaPredicted RBP17.28■□□□□ 0.36
CCNC-218ENST00000524049 RGL3Q3MIN7 710 aa17.28■□□□□ 0.36
CCNC-218ENST00000524049 RALGAPBQ86X10 1494 aa17.28■□□□□ 0.36
CCNC-218ENST00000524049 VPS72Q15906 364 aa17.27■□□□□ 0.36
CCNC-218ENST00000524049 ONECUT3O60422 494 aaPredicted RBP17.26■□□□□ 0.35
CCNC-218ENST00000524049 TMEM132EQ6IEE7 984 aa17.26■□□□□ 0.35
CCNC-218ENST00000524049 SEPT12Q8IYM1 358 aa17.25■□□□□ 0.35
CCNC-218ENST00000524049 PHF8Q9UPP1 1060 aa17.25■□□□□ 0.35
CCNC-218ENST00000524049 PLEKHH1Q9ULM0 1364 aa17.25■□□□□ 0.35
CCNC-218ENST00000524049 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.24■□□□□ 0.35
CCNC-218ENST00000524049 MARF1Q9Y4F3 1742 aaKnown RBP17.24■□□□□ 0.35
CCNC-218ENST00000524049 SPATA31E1Q6ZUB1 1445 aa17.24■□□□□ 0.35
CCNC-218ENST00000524049 YTHDC2Q9H6S0 1430 aaKnown RBP17.23■□□□□ 0.35
CCNC-218ENST00000524049 SBNO1A3KN83 1393 aa17.23■□□□□ 0.35
CCNC-218ENST00000524049 ACIN1Q9UKV3 1341 aaKnown RBP17.22■□□□□ 0.35
CCNC-218ENST00000524049 PIK3C2GO75747 1445 aa17.22■□□□□ 0.35
CCNC-218ENST00000524049 TNS3Q68CZ2 1445 aa17.22■□□□□ 0.35
CCNC-218ENST00000524049 DEFB132Q7Z7B7 95 aa17.22■□□□□ 0.35
CCNC-218ENST00000524049 MPHOSPH9Q99550 1183 aa17.22■□□□□ 0.35
CCNC-218ENST00000524049 C14orf93Q9H972 538 aaKnown RBP17.22■□□□□ 0.35
CCNC-218ENST00000524049 CCDC9Q9Y3X0 531 aaKnown RBP17.22■□□□□ 0.35
CCNC-218ENST00000524049 ARHGEF10O15013 1369 aa17.22■□□□□ 0.35
CCNC-218ENST00000524049 GLI3P10071 1580 aa17.22■□□□□ 0.35
CCNC-218ENST00000524049 KIF1AQ12756 1690 aa17.22■□□□□ 0.35
CCNC-218ENST00000524049 DHX57Q6P158 1386 aaKnown RBP17.21■□□□□ 0.35
CCNC-218ENST00000524049 KRT27Q7Z3Y8 459 aa17.21■□□□□ 0.35
CCNC-218ENST00000524049 USP32Q8NFA0 1604 aa17.19■□□□□ 0.34
CCNC-218ENST00000524049 KNDC1Q76NI1 1749 aa17.18■□□□□ 0.34
CCNC-218ENST00000524049 BAG6P46379 1132 aa17.18■□□□□ 0.34
CCNC-218ENST00000524049 LMOD2Q6P5Q4 547 aa17.18■□□□□ 0.34
CCNC-218ENST00000524049 CABLES1Q8TDN4 633 aa17.18■□□□□ 0.34
CCNC-218ENST00000524049 FMN2Q9NZ56 1722 aa17.18■□□□□ 0.34
CCNC-218ENST00000524049 NRXN1Q9ULB1 1477 aa17.17■□□□□ 0.34
CCNC-218ENST00000524049 FAM83GA6ND36 823 aa17.16■□□□□ 0.34
CCNC-218ENST00000524049 ANKARQ7Z5J8 1434 aa17.14■□□□□ 0.33
CCNC-218ENST00000524049 A0A0G2JS52 829 aa17.14■□□□□ 0.33
CCNC-218ENST00000524049 MYT1Q01538 1121 aa17.14■□□□□ 0.33
CCNC-218ENST00000524049 CFAP70Q5T0N1 1121 aa17.14■□□□□ 0.33
CCNC-218ENST00000524049 PRAM1Q96QH2 718 aa17.14■□□□□ 0.33
CCNC-218ENST00000524049 POGKQ9P215 609 aa17.14■□□□□ 0.33
CCNC-218ENST00000524049 SRCAPQ6ZRS2 3230 aa17.13■□□□□ 0.33
CCNC-218ENST00000524049 PLEKHG5O94827 1062 aa17.12■□□□□ 0.33
CCNC-218ENST00000524049 IFT172Q9UG01 1749 aa17.12■□□□□ 0.33
CCNC-218ENST00000524049 NWD2Q9ULI1 1742 aa17.12■□□□□ 0.33
CCNC-218ENST00000524049 FAM98CQ17RN3 349 aaKnown RBP17.11■□□□□ 0.33
CCNC-218ENST00000524049 PMFBP1Q8TBY8 1022 aa17.11■□□□□ 0.33
CCNC-218ENST00000524049 BTG4Q9NY30 223 aa17.11■□□□□ 0.33
CCNC-218ENST00000524049 EIF3AQ14152 1382 aaKnown RBP17.11■□□□□ 0.33
CCNC-218ENST00000524049 GPRASP1Q5JY77 1395 aa17.11■□□□□ 0.33
CCNC-218ENST00000524049 SAFB2Q14151 953 aaKnown RBP eCLIP17.1■□□□□ 0.33
CCNC-218ENST00000524049 HRCP23327 699 aa17.09■□□□□ 0.33
CCNC-218ENST00000524049 EP400Q96L91 3159 aa17.09■□□□□ 0.33
CCNC-218ENST00000524049 LRP5O75197 1615 aa17.08■□□□□ 0.32
CCNC-218ENST00000524049 DLC1Q96QB1 1528 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms