RNA–Protein interactions for RNA: ENST00000524047.5

LINCR-0001-203, humanhuman

TSL 4 BASIC

Gene LINCR-0001, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCR-0001-203ENST00000524047 FAM187AA6NFU0 413 aa7.83□□□□□ -1.16
LINCR-0001-203ENST00000524047 CLCN1P35523 988 aa7.83□□□□□ -1.16
LINCR-0001-203ENST00000524047 MMP16P51512 607 aa7.83□□□□□ -1.16
LINCR-0001-203ENST00000524047 USB1Q9BQ65 265 aaKnown RBP7.82□□□□□ -1.16
LINCR-0001-203ENST00000524047 FAM217BQ9NTX9 383 aaPredicted RBP7.82□□□□□ -1.16
LINCR-0001-203ENST00000524047 ZBTB24O43167 697 aaPredicted RBP7.81□□□□□ -1.16
LINCR-0001-203ENST00000524047 HOXA2O43364 376 aa7.81□□□□□ -1.16
LINCR-0001-203ENST00000524047 FOXC1Q12948 553 aa7.81□□□□□ -1.16
LINCR-0001-203ENST00000524047 TOR4AQ9NXH8 423 aa7.8□□□□□ -1.16
LINCR-0001-203ENST00000524047 DXOO77932 396 aaKnown RBP7.79□□□□□ -1.16
LINCR-0001-203ENST00000524047 KRI1Q8N9T8 703 aaKnown RBP7.78□□□□□ -1.16
LINCR-0001-203ENST00000524047 HLA-CQ95604 372 aa7.78□□□□□ -1.16
LINCR-0001-203ENST00000524047 ZMYND10O75800 440 aa7.77□□□□□ -1.17
LINCR-0001-203ENST00000524047 BARGINQ6ZT62 677 aa7.77□□□□□ -1.17
LINCR-0001-203ENST00000524047 CYP4X1Q8N118 509 aa7.77□□□□□ -1.17
LINCR-0001-203ENST00000524047 CRIPAKQ8N1N5 446 aa7.77□□□□□ -1.17
LINCR-0001-203ENST00000524047 AAASQ9NRG9 546 aa7.77□□□□□ -1.17
LINCR-0001-203ENST00000524047 AVPP01185 164 aa7.76□□□□□ -1.17
LINCR-0001-203ENST00000524047 TRIM32Q13049 653 aa7.76□□□□□ -1.17
LINCR-0001-203ENST00000524047 NUTM1Q86Y26 1132 aa7.76□□□□□ -1.17
LINCR-0001-203ENST00000524047 REPIN1Q9BWE0 567 aaKnown RBP7.76□□□□□ -1.17
LINCR-0001-203ENST00000524047 WNT7AO00755 349 aa7.75□□□□□ -1.17
LINCR-0001-203ENST00000524047 SSTR3P32745 418 aaPredicted RBP7.74□□□□□ -1.17
LINCR-0001-203ENST00000524047 GUCA2AQ02747 115 aa7.74□□□□□ -1.17
LINCR-0001-203ENST00000524047 POTECB2RU33 542 aa7.73□□□□□ -1.17
LINCR-0001-203ENST00000524047 ST8SIA5O15466 376 aa7.73□□□□□ -1.17
LINCR-0001-203ENST00000524047 JUNDP17535 347 aa7.73□□□□□ -1.17
LINCR-0001-203ENST00000524047 AMHR2Q16671 573 aa7.73□□□□□ -1.17
LINCR-0001-203ENST00000524047 CTC1Q2NKJ3 1217 aa7.73□□□□□ -1.17
LINCR-0001-203ENST00000524047 RETREG3Q86VR2 466 aa7.73□□□□□ -1.17
LINCR-0001-203ENST00000524047 ZC3H15Q8WU90 426 aaKnown RBP7.73□□□□□ -1.17
LINCR-0001-203ENST00000524047 ZNF775Q96BV0 537 aaPredicted RBP7.73□□□□□ -1.17
LINCR-0001-203ENST00000524047 TTC24A2A3L6 582 aaPredicted RBP7.72□□□□□ -1.17
LINCR-0001-203ENST00000524047 SMCPP49901 116 aaPredicted RBP7.72□□□□□ -1.17
LINCR-0001-203ENST00000524047 SNIP1Q8TAD8 396 aaKnown RBP7.72□□□□□ -1.17
LINCR-0001-203ENST00000524047 SYMPKQ92797 1274 aaKnown RBP7.72□□□□□ -1.17
LINCR-0001-203ENST00000524047 FDX1P10109 184 aa7.71□□□□□ -1.18
LINCR-0001-203ENST00000524047 CCDC24Q8N4L8 307 aa7.71□□□□□ -1.18
LINCR-0001-203ENST00000524047 SPIRE2Q8WWL2 714 aa7.71□□□□□ -1.18
LINCR-0001-203ENST00000524047 AXIN1O15169 862 aa7.7□□□□□ -1.18
LINCR-0001-203ENST00000524047 WNT7BP56706 349 aa7.7□□□□□ -1.18
LINCR-0001-203ENST00000524047 TTLL12Q14166 644 aaPredicted RBP7.7□□□□□ -1.18
LINCR-0001-203ENST00000524047 MRGPRX2Q96LB1 330 aa7.7□□□□□ -1.18
LINCR-0001-203ENST00000524047 PCDHGC3Q9UN70 934 aa7.7□□□□□ -1.18
LINCR-0001-203ENST00000524047 SMPD1P17405 629 aa7.69□□□□□ -1.18
LINCR-0001-203ENST00000524047 GIGYF2Q6Y7W6 1299 aaKnown RBP7.69□□□□□ -1.18
LINCR-0001-203ENST00000524047 BCANQ96GW7 911 aa7.69□□□□□ -1.18
LINCR-0001-203ENST00000524047 NUDT12Q9BQG2 462 aa7.68□□□□□ -1.18
LINCR-0001-203ENST00000524047 C6orf229H3BNL8 230 aa7.67□□□□□ -1.18
LINCR-0001-203ENST00000524047 SKOR1P84550 965 aa7.67□□□□□ -1.18
LINCR-0001-203ENST00000524047 RC3H1Q5TC82 1133 aaKnown RBP7.67□□□□□ -1.18
LINCR-0001-203ENST00000524047 DACH1Q9UI36 760 aa7.67□□□□□ -1.18
LINCR-0001-203ENST00000524047 MOXD2PA6NHM9 499 aa7.66□□□□□ -1.18
LINCR-0001-203ENST00000524047 GJA5P36382 358 aa7.66□□□□□ -1.18
LINCR-0001-203ENST00000524047 SPDYE5A6NIY4 337 aa7.65□□□□□ -1.18
LINCR-0001-203ENST00000524047 J3QL48 77 aa7.65□□□□□ -1.18
LINCR-0001-203ENST00000524047 MS4A1P11836 297 aa7.65□□□□□ -1.18
LINCR-0001-203ENST00000524047 NDUFV2P19404 249 aa7.65□□□□□ -1.18
LINCR-0001-203ENST00000524047 DIXDC1Q155Q3 683 aa7.65□□□□□ -1.18
LINCR-0001-203ENST00000524047 PTCRAQ6ISU1 281 aaPredicted RBP7.65□□□□□ -1.18
LINCR-0001-203ENST00000524047 BEGAINQ9BUH8 593 aa7.65□□□□□ -1.18
LINCR-0001-203ENST00000524047 TRIM66O15016 1216 aa7.64□□□□□ -1.19
LINCR-0001-203ENST00000524047 CCNYL3P0C7X3 344 aa7.64□□□□□ -1.19
LINCR-0001-203ENST00000524047 PTPRNQ16849 979 aa7.64□□□□□ -1.19
LINCR-0001-203ENST00000524047 DESI1Q6ICB0 168 aa7.64□□□□□ -1.19
LINCR-0001-203ENST00000524047 MTMR2Q13614 643 aa7.63□□□□□ -1.19
LINCR-0001-203ENST00000524047 PARP9Q8IXQ6 854 aa7.63□□□□□ -1.19
LINCR-0001-203ENST00000524047 AK7Q96M32 723 aa7.63□□□□□ -1.19
LINCR-0001-203ENST00000524047 EVA1BQ9NVM1 165 aa7.63□□□□□ -1.19
LINCR-0001-203ENST00000524047 GMPR2Q9P2T1 348 aaKnown RBP7.63□□□□□ -1.19
LINCR-0001-203ENST00000524047 PRR7Q8TB68 274 aa7.62□□□□□ -1.19
LINCR-0001-203ENST00000524047 C11orf95C9JLR9 678 aaPredicted RBP7.61□□□□□ -1.19
LINCR-0001-203ENST00000524047 SIAH2O43255 324 aa7.61□□□□□ -1.19
LINCR-0001-203ENST00000524047 HPS1Q92902 700 aa7.61□□□□□ -1.19
LINCR-0001-203ENST00000524047 TBC1D2Q9BYX2 928 aa7.61□□□□□ -1.19
LINCR-0001-203ENST00000524047 RSBN1LQ6PCB5 846 aaPredicted RBP7.6□□□□□ -1.19
LINCR-0001-203ENST00000524047 TREML4Q6UXN2 200 aa7.6□□□□□ -1.19
LINCR-0001-203ENST00000524047 EHBP1Q8NDI1 1231 aa7.6□□□□□ -1.19
LINCR-0001-203ENST00000524047 ATP13A2Q9NQ11 1180 aa7.6□□□□□ -1.19
LINCR-0001-203ENST00000524047 SPTLC1O15269 473 aa7.59□□□□□ -1.19
LINCR-0001-203ENST00000524047 ALDH1A1P00352 501 aa7.59□□□□□ -1.19
LINCR-0001-203ENST00000524047 SH3BP2P78314 561 aa7.59□□□□□ -1.19
LINCR-0001-203ENST00000524047 KCNH2Q12809 1159 aa7.59□□□□□ -1.19
LINCR-0001-203ENST00000524047 LCE2AQ5TA79 106 aaPredicted RBP7.59□□□□□ -1.19
LINCR-0001-203ENST00000524047 UNC93B1Q9H1C4 597 aa7.59□□□□□ -1.19
LINCR-0001-203ENST00000524047 PRPF38BQ5VTL8 546 aaKnown RBP7.57□□□□□ -1.2
LINCR-0001-203ENST00000524047 LYPD8Q6UX82 237 aa7.57□□□□□ -1.2
LINCR-0001-203ENST00000524047 SENP2Q9HC62 589 aa7.57□□□□□ -1.2
LINCR-0001-203ENST00000524047 PCDHB15Q9Y5E8 787 aa7.57□□□□□ -1.2
LINCR-0001-203ENST00000524047 RIC3Q7Z5B4 369 aa7.56□□□□□ -1.2
LINCR-0001-203ENST00000524047 BAP1Q92560 729 aa7.56□□□□□ -1.2
LINCR-0001-203ENST00000524047 TRIM47Q96LD4 638 aa7.56□□□□□ -1.2
LINCR-0001-203ENST00000524047 ZBTB3Q9H5J0 574 aa7.56□□□□□ -1.2
LINCR-0001-203ENST00000524047 CFAP99D6REC4 459 aa7.55□□□□□ -1.2
LINCR-0001-203ENST00000524047 HRCP23327 699 aa7.55□□□□□ -1.2
LINCR-0001-203ENST00000524047 PDE4DQ08499 809 aa7.55□□□□□ -1.2
LINCR-0001-203ENST00000524047 MPNDQ8N594 471 aa7.55□□□□□ -1.2
LINCR-0001-203ENST00000524047 ZNF511Q8NB15 262 aa7.55□□□□□ -1.2
LINCR-0001-203ENST00000524047 KIFC2Q96AC6 838 aa7.55□□□□□ -1.2
LINCR-0001-203ENST00000524047 SNRPBP14678 240 aaKnown RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms