RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 LRPPRCP42704 1394 aaKnown RBP27.92■■■□□ 2.06
PTP4A3-206ENST00000524028 TECPR2O15040 1411 aa27.92■■■□□ 2.06
PTP4A3-206ENST00000524028 ACIN1Q9UKV3 1341 aaKnown RBP27.9■■■□□ 2.06
PTP4A3-206ENST00000524028 ABCC11Q96J66 1382 aa27.89■■■□□ 2.06
PTP4A3-206ENST00000524028 PLEKHH1Q9ULM0 1364 aa27.89■■■□□ 2.06
PTP4A3-206ENST00000524028 RXRBP28702 533 aa27.89■■■□□ 2.06
PTP4A3-206ENST00000524028 C8orf37Q96NL8 207 aa27.89■■■□□ 2.06
PTP4A3-206ENST00000524028 CDC42BPGQ6DT37 1551 aa27.88■■■□□ 2.05
PTP4A3-206ENST00000524028 RAB3GAP2Q9H2M9 1393 aa27.87■■■□□ 2.05
PTP4A3-206ENST00000524028 ESCO1Q5FWF5 840 aa27.87■■■□□ 2.05
PTP4A3-206ENST00000524028 ADAMTS2O95450 1211 aa27.85■■■□□ 2.05
PTP4A3-206ENST00000524028 C14orf93Q9H972 538 aaKnown RBP27.84■■■□□ 2.05
PTP4A3-206ENST00000524028 YTHDC2Q9H6S0 1430 aaKnown RBP27.84■■■□□ 2.05
PTP4A3-206ENST00000524028 NUTM2FA1L443 756 aa27.83■■■□□ 2.05
PTP4A3-206ENST00000524028 NRXN1Q9ULB1 1477 aa27.82■■■□□ 2.04
PTP4A3-206ENST00000524028 CFAP70Q5T0N1 1121 aa27.81■■■□□ 2.04
PTP4A3-206ENST00000524028 QTRT2Q9H974 415 aaKnown RBP27.81■■■□□ 2.04
PTP4A3-206ENST00000524028 FOXO3O43524 673 aa27.8■■■□□ 2.04
PTP4A3-206ENST00000524028 NGLY1Q96IV0 654 aa27.8■■■□□ 2.04
PTP4A3-206ENST00000524028 NPHP3Q7Z494 1330 aa27.8■■■□□ 2.04
PTP4A3-206ENST00000524028 KNDC1Q76NI1 1749 aa27.8■■■□□ 2.04
PTP4A3-206ENST00000524028 PXDNQ92626 1479 aa27.79■■■□□ 2.04
PTP4A3-206ENST00000524028 CDK12Q9NYV4 1490 aaPredicted RBP27.79■■■□□ 2.04
PTP4A3-206ENST00000524028 XPCQ01831 940 aaPredicted RBP27.79■■■□□ 2.04
PTP4A3-206ENST00000524028 UPF1Q92900 1129 aaKnown RBP eCLIP27.79■■■□□ 2.049e-7■■■■□ 25.3
PTP4A3-206ENST00000524028 MYOM2P54296 1465 aa27.78■■■□□ 2.04
PTP4A3-206ENST00000524028 SIRT1Q96EB6 747 aa27.78■■■□□ 2.04
PTP4A3-206ENST00000524028 COL22A1Q8NFW1 1626 aaPredicted RBP27.74■■■□□ 2.03
PTP4A3-206ENST00000524028 RBM6P78332 1123 aaKnown RBP27.74■■■□□ 2.03
PTP4A3-206ENST00000524028 DHX57Q6P158 1386 aaKnown RBP27.73■■■□□ 2.03
PTP4A3-206ENST00000524028 RGS12O14924 1447 aa27.72■■■□□ 2.03
PTP4A3-206ENST00000524028 FNBP4Q8N3X1 1017 aaPredicted RBP27.71■■■□□ 2.03
PTP4A3-206ENST00000524028 USP21Q9UK80 565 aa27.71■■■□□ 2.03
PTP4A3-206ENST00000524028 FMN2Q9NZ56 1722 aa27.7■■■□□ 2.03
PTP4A3-206ENST00000524028 PRAM1Q96QH2 718 aa27.69■■■□□ 2.02
PTP4A3-206ENST00000524028 SAFB2Q14151 953 aaKnown RBP eCLIP27.67■■■□□ 2.02
PTP4A3-206ENST00000524028 SPATA31A3Q5VYP0 1347 aa27.65■■■□□ 2.02
PTP4A3-206ENST00000524028 HRCP23327 699 aa27.64■■■□□ 2.02
PTP4A3-206ENST00000524028 KRT28Q7Z3Y7 464 aa27.64■■■□□ 2.02
PTP4A3-206ENST00000524028 TRPC5Q9UL62 973 aaPredicted RBP27.64■■■□□ 2.02
PTP4A3-206ENST00000524028 KDM2AQ9Y2K7 1162 aa27.64■■■□□ 2.02
PTP4A3-206ENST00000524028 ADGRB1O14514 1584 aa27.63■■■□□ 2.01
PTP4A3-206ENST00000524028 ATRNO75882 1429 aa27.62■■■□□ 2.01
PTP4A3-206ENST00000524028 DCAF11Q8TEB1 546 aa27.62■■■□□ 2.01
PTP4A3-206ENST00000524028 PHF8Q9UPP1 1060 aa27.62■■■□□ 2.01
PTP4A3-206ENST00000524028 DLC1Q96QB1 1528 aa27.62■■■□□ 2.01
PTP4A3-206ENST00000524028 POGKQ9P215 609 aa27.61■■■□□ 2.01
PTP4A3-206ENST00000524028 BCL9LQ86UU0 1499 aa27.61■■■□□ 2.01
PTP4A3-206ENST00000524028 KIF1AQ12756 1690 aa27.61■■■□□ 2.01
PTP4A3-206ENST00000524028 TRAK1Q9UPV9 953 aa27.59■■■□□ 2.01
PTP4A3-206ENST00000524028 RGPD8O14715 1765 aaPredicted RBP27.56■■■□□ 2
PTP4A3-206ENST00000524028 HIRIP3Q9BW71 556 aaPredicted RBP27.55■■■□□ 2
PTP4A3-206ENST00000524028 PSME1Q06323 249 aa27.54■■■□□ 2
PTP4A3-206ENST00000524028 TNS3Q68CZ2 1445 aa27.53■■■□□ 2
PTP4A3-206ENST00000524028 PMFBP1Q8TBY8 1022 aa27.53■■■□□ 2
PTP4A3-206ENST00000524028 MARF1Q9Y4F3 1742 aaKnown RBP27.53■■■□□ 2
PTP4A3-206ENST00000524028 USP32Q8NFA0 1604 aa27.52■■■□□ 2
PTP4A3-206ENST00000524028 ANKARQ7Z5J8 1434 aa27.52■■■□□ 2
PTP4A3-206ENST00000524028 CABLES1Q8TDN4 633 aa27.52■■■□□ 2
PTP4A3-206ENST00000524028 STAC3Q96MF2 364 aa27.52■■■□□ 2
PTP4A3-206ENST00000524028 ADGRB2O60241 1585 aa27.52■■■□□ 2
PTP4A3-206ENST00000524028 MINK1Q8N4C8 1332 aaPredicted RBP27.51■■□□□ 1.99
PTP4A3-206ENST00000524028 SBNO1A3KN83 1393 aa27.5■■□□□ 1.99
PTP4A3-206ENST00000524028 GJD4Q96KN9 370 aaPredicted RBP27.5■■□□□ 1.99
PTP4A3-206ENST00000524028 SLIT2O94813 1529 aa27.49■■□□□ 1.99
PTP4A3-206ENST00000524028 PRR36Q9H6K5 1346 aa27.48■■□□□ 1.99
PTP4A3-206ENST00000524028 PLEKHG5O94827 1062 aa27.48■■□□□ 1.99
PTP4A3-206ENST00000524028 UNC5CLQ8IV45 518 aa27.48■■□□□ 1.99
PTP4A3-206ENST00000524028 ATAD2Q6PL18 1390 aa27.48■■□□□ 1.99
PTP4A3-206ENST00000524028 LMOD2Q6P5Q4 547 aa27.46■■□□□ 1.99
PTP4A3-206ENST00000524028 WASLO00401 505 aaPredicted RBP27.45■■□□□ 1.98
PTP4A3-206ENST00000524028 HAP1P54257 671 aaPredicted RBP27.44■■□□□ 1.98
PTP4A3-206ENST00000524028 ARHGEF10O15013 1369 aa27.43■■□□□ 1.98
PTP4A3-206ENST00000524028 RALGAPBQ86X10 1494 aa27.42■■□□□ 1.98
PTP4A3-206ENST00000524028 TULP4Q9NRJ4 1543 aa27.41■■□□□ 1.98
PTP4A3-206ENST00000524028 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.41■■□□□ 1.98
PTP4A3-206ENST00000524028 GLI3P10071 1580 aa27.39■■□□□ 1.98
PTP4A3-206ENST00000524028 EIF3AQ14152 1382 aaKnown RBP27.39■■□□□ 1.98
PTP4A3-206ENST00000524028 FAM83GA6ND36 823 aa27.37■■□□□ 1.97
PTP4A3-206ENST00000524028 TRPM3Q9HCF6 1732 aaPredicted RBP27.37■■□□□ 1.97
PTP4A3-206ENST00000524028 GPRASP1Q5JY77 1395 aa27.36■■□□□ 1.97
PTP4A3-206ENST00000524028 ABCA3Q99758 1704 aa27.36■■□□□ 1.97
PTP4A3-206ENST00000524028 VPS72Q15906 364 aa27.35■■□□□ 1.97
PTP4A3-206ENST00000524028 ARHGEF28Q8N1W1 1705 aaKnown RBP27.35■■□□□ 1.97
PTP4A3-206ENST00000524028 NGDNQ8NEJ9 315 aaKnown RBP27.33■■□□□ 1.97
PTP4A3-206ENST00000524028 NUDT16Q96DE0 195 aaKnown RBP27.33■■□□□ 1.97
PTP4A3-206ENST00000524028 NBPF1Q3BBV0 1214 aa27.32■■□□□ 1.96
PTP4A3-206ENST00000524028 ATP7BP35670 1465 aa27.32■■□□□ 1.96
PTP4A3-206ENST00000524028 PLCH1Q4KWH8 1693 aa27.31■■□□□ 1.96
PTP4A3-206ENST00000524028 ALS2Q96Q42 1657 aa27.31■■□□□ 1.96
PTP4A3-206ENST00000524028 CDK19Q9BWU1 502 aa27.31■■□□□ 1.96
PTP4A3-206ENST00000524028 EP400Q96L91 3159 aa27.31■■□□□ 1.96
PTP4A3-206ENST00000524028 SEPT12Q8IYM1 358 aa27.29■■□□□ 1.96
PTP4A3-206ENST00000524028 NWD2Q9ULI1 1742 aa27.28■■□□□ 1.96
PTP4A3-206ENST00000524028 ONECUT3O60422 494 aaPredicted RBP27.28■■□□□ 1.96
PTP4A3-206ENST00000524028 PAK3O75914 559 aaPredicted RBP27.28■■□□□ 1.96
PTP4A3-206ENST00000524028 CCDC125Q86Z20 511 aa27.28■■□□□ 1.96
PTP4A3-206ENST00000524028 CCDC9Q9Y3X0 531 aaKnown RBP27.28■■□□□ 1.96
PTP4A3-206ENST00000524028 BTG4Q9NY30 223 aa27.26■■□□□ 1.95
PTP4A3-206ENST00000524028 KIAA1210Q9ULL0 1709 aa27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms