RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 DDRGK1Q96HY6 314 aa14.4□□□□□ -0.1
HDAC9-228ENST00000524023 CAMSAP1Q5T5Y3 1602 aa14.4□□□□□ -0.1
HDAC9-228ENST00000524023 SIGLEC1Q9BZZ2 1709 aa14.39□□□□□ -0.11
HDAC9-228ENST00000524023 GLI2P10070 1586 aa14.38□□□□□ -0.11
HDAC9-228ENST00000524023 TNNT2P45379 298 aaPredicted RBP14.38□□□□□ -0.11
HDAC9-228ENST00000524023 FAM161AQ3B820 660 aa14.38□□□□□ -0.11
HDAC9-228ENST00000524023 PIK3C2BO00750 1634 aa14.38□□□□□ -0.11
HDAC9-228ENST00000524023 C8orf34Q49A92 452 aa14.37□□□□□ -0.11
HDAC9-228ENST00000524023 RUNDC1Q96C34 613 aa14.37□□□□□ -0.11
HDAC9-228ENST00000524023 PDE3AQ14432 1141 aa14.37□□□□□ -0.11
HDAC9-228ENST00000524023 LAS1LQ9Y4W2 734 aaKnown RBP14.37□□□□□ -0.11
HDAC9-228ENST00000524023 ARHGEF28Q8N1W1 1705 aaKnown RBP14.37□□□□□ -0.11
HDAC9-228ENST00000524023 NINLQ9Y2I6 1382 aa14.37□□□□□ -0.11
HDAC9-228ENST00000524023 IQSEC2Q5JU85 1478 aa14.37□□□□□ -0.11
HDAC9-228ENST00000524023 PUS7Q96PZ0 661 aaKnown RBP14.36□□□□□ -0.11
HDAC9-228ENST00000524023 CGNL1Q0VF96 1302 aa14.36□□□□□ -0.11
HDAC9-228ENST00000524023 NEXMIFQ5QGS0 1516 aa14.36□□□□□ -0.11
HDAC9-228ENST00000524023 TULP4Q9NRJ4 1543 aa14.35□□□□□ -0.11
HDAC9-228ENST00000524023 EVC2Q86UK5 1308 aa14.34□□□□□ -0.11
HDAC9-228ENST00000524023 VGFO15240 615 aaPredicted RBP14.34□□□□□ -0.11
HDAC9-228ENST00000524023 RGS3P49796 1198 aa14.34□□□□□ -0.11
HDAC9-228ENST00000524023 TCP11L2Q8N4U5 519 aa14.34□□□□□ -0.11
HDAC9-228ENST00000524023 PHF23Q9BUL5 403 aaPredicted RBP14.34□□□□□ -0.11
HDAC9-228ENST00000524023 PPM1GO15355 546 aaPredicted RBP14.34□□□□□ -0.11
HDAC9-228ENST00000524023 MTHFSP49914 203 aa14.34□□□□□ -0.11
HDAC9-228ENST00000524023 NEUROD2Q15784 382 aa14.34□□□□□ -0.11
HDAC9-228ENST00000524023 USP35Q9P2H5 1018 aa14.34□□□□□ -0.11
HDAC9-228ENST00000524023 NEO1Q92859 1461 aa14.34□□□□□ -0.11
HDAC9-228ENST00000524023 RRP7AQ9Y3A4 280 aaKnown RBP14.33□□□□□ -0.11
HDAC9-228ENST00000524023 ANKRD36BQ8N2N9 1353 aa14.33□□□□□ -0.12
HDAC9-228ENST00000524023 IGHDP01880 384 aa14.33□□□□□ -0.12
HDAC9-228ENST00000524023 NUTM2DQ5VT03 806 aaPredicted RBP14.33□□□□□ -0.12
HDAC9-228ENST00000524023 WDR63Q8IWG1 891 aa14.33□□□□□ -0.12
HDAC9-228ENST00000524023 OSCARQ8IYS5 282 aa14.33□□□□□ -0.12
HDAC9-228ENST00000524023 CFAP53Q96M91 514 aa14.33□□□□□ -0.12
HDAC9-228ENST00000524023 DIP2CQ9Y2E4 1556 aa14.33□□□□□ -0.12
HDAC9-228ENST00000524023 NSD2O96028 1365 aa14.32□□□□□ -0.12
HDAC9-228ENST00000524023 RAPGEF3O95398 923 aa14.32□□□□□ -0.12
HDAC9-228ENST00000524023 NEFMP07197 916 aa14.32□□□□□ -0.12
HDAC9-228ENST00000524023 CANXP27824 592 aaKnown RBP14.32□□□□□ -0.12
HDAC9-228ENST00000524023 PANK1Q8TE04 598 aa14.32□□□□□ -0.12
HDAC9-228ENST00000524023 CLUAP1Q96AJ1 413 aa14.32□□□□□ -0.12
HDAC9-228ENST00000524023 ARHGAP31Q2M1Z3 1444 aa14.31□□□□□ -0.12
HDAC9-228ENST00000524023 RARSP54136 660 aaKnown RBP14.31□□□□□ -0.12
HDAC9-228ENST00000524023 CCDC27Q2M243 656 aa14.31□□□□□ -0.12
HDAC9-228ENST00000524023 COG6Q9Y2V7 657 aa14.31□□□□□ -0.12
HDAC9-228ENST00000524023 VIRMAQ69YN4 1812 aaKnown RBP14.3□□□□□ -0.12
HDAC9-228ENST00000524023 NCBP3Q53F19 620 aaKnown RBP14.29□□□□□ -0.12
HDAC9-228ENST00000524023 CABP2Q9NPB3 220 aa14.29□□□□□ -0.12
HDAC9-228ENST00000524023 ZFYVE9O95405 1425 aa14.29□□□□□ -0.12
HDAC9-228ENST00000524023 IDI1Q13907 227 aa14.29□□□□□ -0.12
HDAC9-228ENST00000524023 FRAT1Q92837 279 aaPredicted RBP14.29□□□□□ -0.12
HDAC9-228ENST00000524023 RICTORQ6R327 1708 aa14.28□□□□□ -0.12
HDAC9-228ENST00000524023 MYO5BQ9ULV0 1848 aa14.28□□□□□ -0.12
HDAC9-228ENST00000524023 ADGRB2O60241 1585 aa14.27□□□□□ -0.13
HDAC9-228ENST00000524023 SLC4A3P48751 1232 aa14.27□□□□□ -0.13
HDAC9-228ENST00000524023 AAMPQ13685 434 aa14.27□□□□□ -0.13
HDAC9-228ENST00000524023 SLC52A1Q9NWF4 448 aa14.26□□□□□ -0.13
HDAC9-228ENST00000524023 DAXXQ9UER7 740 aaPredicted RBP14.26□□□□□ -0.13
HDAC9-228ENST00000524023 ABCC11Q96J66 1382 aa14.26□□□□□ -0.13
HDAC9-228ENST00000524023 U2AF1L5P0DN76 240 aaPredicted RBP14.26□□□□□ -0.13
HDAC9-228ENST00000524023 U2AF1Q01081 240 aaKnown RBP eCLIP14.26□□□□□ -0.13
HDAC9-228ENST00000524023 SAFB2Q14151 953 aaKnown RBP eCLIP14.26□□□□□ -0.13
HDAC9-228ENST00000524023 MAPK8IP3Q9UPT6 1336 aa14.25□□□□□ -0.13
HDAC9-228ENST00000524023 A0A1W2PP64 1363 aa14.25□□□□□ -0.13
HDAC9-228ENST00000524023 RLBP1P12271 317 aa14.24□□□□□ -0.13
HDAC9-228ENST00000524023 MYH16Q9H6N6 1097 aa14.24□□□□□ -0.13
HDAC9-228ENST00000524023 PMFBP1Q8TBY8 1022 aa14.24□□□□□ -0.13
HDAC9-228ENST00000524023 STK26Q9P289 416 aa14.24□□□□□ -0.13
HDAC9-228ENST00000524023 TNNQ9UQP3 1299 aa14.24□□□□□ -0.13
HDAC9-228ENST00000524023 PREX1Q8TCU6 1659 aa14.24□□□□□ -0.13
HDAC9-228ENST00000524023 TMEM131LA2VDJ0 1609 aa14.24□□□□□ -0.13
HDAC9-228ENST00000524023 YEATS2Q9ULM3 1422 aa14.23□□□□□ -0.13
HDAC9-228ENST00000524023 PTPRMP28827 1452 aa14.23□□□□□ -0.13
HDAC9-228ENST00000524023 SRPK2P78362 688 aaKnown RBP14.23□□□□□ -0.13
HDAC9-228ENST00000524023 BCL2L13Q9BXK5 485 aa14.23□□□□□ -0.13
HDAC9-228ENST00000524023 PCDHB15Q9Y5E8 787 aa14.22□□□□□ -0.13
HDAC9-228ENST00000524023 ANKRD26Q9UPS8 1709 aa14.22□□□□□ -0.13
HDAC9-228ENST00000524023 NFKBIBQ15653 356 aa14.22□□□□□ -0.13
HDAC9-228ENST00000524023 USP19O94966 1318 aa14.22□□□□□ -0.13
HDAC9-228ENST00000524023 COL3A1P02461 1466 aaPredicted RBP14.21□□□□□ -0.13
HDAC9-228ENST00000524023 CLTCQ00610 1675 aaKnown RBP14.21□□□□□ -0.13
HDAC9-228ENST00000524023 GGNBP2Q9H3C7 697 aa14.21□□□□□ -0.13
HDAC9-228ENST00000524023 ATAD2Q6PL18 1390 aa14.21□□□□□ -0.13
HDAC9-228ENST00000524023 PLEKHF1Q96S99 279 aa14.2□□□□□ -0.14
HDAC9-228ENST00000524023 SENP3Q9H4L4 574 aaPredicted RBP14.2□□□□□ -0.14
HDAC9-228ENST00000524023 MED14O60244 1454 aa14.19□□□□□ -0.14
HDAC9-228ENST00000524023 CD163L1Q9NR16 1453 aa14.19□□□□□ -0.14
HDAC9-228ENST00000524023 YTHDC2Q9H6S0 1430 aaKnown RBP14.19□□□□□ -0.14
HDAC9-228ENST00000524023 MINK1Q8N4C8 1332 aaPredicted RBP14.19□□□□□ -0.14
HDAC9-228ENST00000524023 CT47B1P0C2W7 299 aaPredicted RBP14.19□□□□□ -0.14
HDAC9-228ENST00000524023 TERF2IPQ9NYB0 399 aa14.19□□□□□ -0.14
HDAC9-228ENST00000524023 U2SURPO15042 1029 aaKnown RBP14.19□□□□□ -0.14
HDAC9-228ENST00000524023 FYB1O15117 783 aa14.19□□□□□ -0.14
HDAC9-228ENST00000524023 PRAM1Q96QH2 718 aa14.19□□□□□ -0.14
HDAC9-228ENST00000524023 NLRP1Q9C000 1473 aa14.18□□□□□ -0.14
HDAC9-228ENST00000524023 SEC24BO95487 1268 aa14.18□□□□□ -0.14
HDAC9-228ENST00000524023 TMPOP42166 694 aaKnown RBP14.18□□□□□ -0.14
HDAC9-228ENST00000524023 ZMYM3Q14202 1370 aa14.18□□□□□ -0.14
HDAC9-228ENST00000524023 MVPQ14764 893 aaKnown RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms