RNA–Protein interactions for RNA: ENST00000523777.5

TRAPPC9-214, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-214ENST00000523777 TRPM1Q7Z4N2 1603 aa23.09■■□□□ 1.29
TRAPPC9-214ENST00000523777 PRAM1Q96QH2 718 aa23.08■■□□□ 1.29
TRAPPC9-214ENST00000523777 CDC42BPGQ6DT37 1551 aa23.07■■□□□ 1.28
TRAPPC9-214ENST00000523777 NBPF1Q3BBV0 1214 aa23.06■■□□□ 1.28
TRAPPC9-214ENST00000523777 ROCK2O75116 1388 aaKnown RBP23.05■■□□□ 1.28
TRAPPC9-214ENST00000523777 PLEKHH1Q9ULM0 1364 aa23.05■■□□□ 1.28
TRAPPC9-214ENST00000523777 ROBO1Q9Y6N7 1651 aa23.04■■□□□ 1.28
TRAPPC9-214ENST00000523777 MST1RQ04912 1400 aa23.04■■□□□ 1.28
TRAPPC9-214ENST00000523777 ARHGEF28Q8N1W1 1705 aaKnown RBP23.04■■□□□ 1.28
TRAPPC9-214ENST00000523777 NBPF8Q3BBV2 869 aa23.02■■□□□ 1.28
TRAPPC9-214ENST00000523777 GPRASP1Q5JY77 1395 aa23.01■■□□□ 1.27
TRAPPC9-214ENST00000523777 RALGAPBQ86X10 1494 aa23■■□□□ 1.27
TRAPPC9-214ENST00000523777 SAFB2Q14151 953 aaKnown RBP eCLIP23■■□□□ 1.27
TRAPPC9-214ENST00000523777 EIF3AQ14152 1382 aaKnown RBP23■■□□□ 1.27
TRAPPC9-214ENST00000523777 ADGRB2O60241 1585 aa22.99■■□□□ 1.27
TRAPPC9-214ENST00000523777 C1orf167Q5SNV9 1468 aa22.98■■□□□ 1.27
TRAPPC9-214ENST00000523777 HSPA1LP34931 641 aa22.98■■□□□ 1.27
TRAPPC9-214ENST00000523777 BRINP3Q76B58 766 aa22.97■■□□□ 1.27
TRAPPC9-214ENST00000523777 FMN2Q9NZ56 1722 aa22.96■■□□□ 1.27
TRAPPC9-214ENST00000523777 CARD11Q9BXL7 1154 aa22.96■■□□□ 1.27
TRAPPC9-214ENST00000523777 CENPJQ9HC77 1338 aaPredicted RBP22.96■■□□□ 1.27
TRAPPC9-214ENST00000523777 MINK1Q8N4C8 1332 aaPredicted RBP22.94■■□□□ 1.26
TRAPPC9-214ENST00000523777 AHDC1Q5TGY3 1603 aaPredicted RBP22.93■■□□□ 1.26
TRAPPC9-214ENST00000523777 ANKARQ7Z5J8 1434 aa22.92■■□□□ 1.26
TRAPPC9-214ENST00000523777 WASLO00401 505 aaPredicted RBP22.92■■□□□ 1.26
TRAPPC9-214ENST00000523777 PHLPP1O60346 1717 aa22.91■■□□□ 1.26
TRAPPC9-214ENST00000523777 ESCO1Q5FWF5 840 aa22.91■■□□□ 1.26
TRAPPC9-214ENST00000523777 HIRIP3Q9BW71 556 aaPredicted RBP22.9■■□□□ 1.26
TRAPPC9-214ENST00000523777 QRICH2Q9H0J4 1663 aa22.88■■□□□ 1.25
TRAPPC9-214ENST00000523777 SLC24A1O60721 1099 aa22.88■■□□□ 1.25
TRAPPC9-214ENST00000523777 ORAI2Q96SN7 254 aa22.88■■□□□ 1.25
TRAPPC9-214ENST00000523777 NHSL1Q5SYE7 1610 aa22.88■■□□□ 1.25
TRAPPC9-214ENST00000523777 TULP4Q9NRJ4 1543 aa22.87■■□□□ 1.25
TRAPPC9-214ENST00000523777 KIF1AQ12756 1690 aa22.87■■□□□ 1.25
TRAPPC9-214ENST00000523777 NUTM2FA1L443 756 aa22.87■■□□□ 1.25
TRAPPC9-214ENST00000523777 NPHP3Q7Z494 1330 aa22.86■■□□□ 1.25
TRAPPC9-214ENST00000523777 SBNO2Q9Y2G9 1366 aa22.85■■□□□ 1.25
TRAPPC9-214ENST00000523777 CDK19Q9BWU1 502 aa22.84■■□□□ 1.25
TRAPPC9-214ENST00000523777 RGPD8O14715 1765 aaPredicted RBP22.84■■□□□ 1.25
TRAPPC9-214ENST00000523777 EVC2Q86UK5 1308 aa22.83■■□□□ 1.25
TRAPPC9-214ENST00000523777 COL16A1Q07092 1604 aaPredicted RBP22.83■■□□□ 1.25
TRAPPC9-214ENST00000523777 LRRC59Q96AG4 307 aaKnown RBP22.83■■□□□ 1.25
TRAPPC9-214ENST00000523777 PHF8Q9UPP1 1060 aa22.83■■□□□ 1.25
TRAPPC9-214ENST00000523777 ITSN1Q15811 1721 aa22.82■■□□□ 1.24
TRAPPC9-214ENST00000523777 JCADQ9P266 1359 aa22.82■■□□□ 1.24
TRAPPC9-214ENST00000523777 SOS2Q07890 1332 aaPredicted RBP22.81■■□□□ 1.24
TRAPPC9-214ENST00000523777 USP32Q8NFA0 1604 aa22.8■■□□□ 1.24
TRAPPC9-214ENST00000523777 SRPK2P78362 688 aaKnown RBP22.8■■□□□ 1.24
TRAPPC9-214ENST00000523777 NUDT16Q96DE0 195 aaKnown RBP22.8■■□□□ 1.24
TRAPPC9-214ENST00000523777 FOXO3O43524 673 aa22.79■■□□□ 1.24
TRAPPC9-214ENST00000523777 CCDC61Q9Y6R9 512 aa22.79■■□□□ 1.24
TRAPPC9-214ENST00000523777 PSME1Q06323 249 aa22.78■■□□□ 1.24
TRAPPC9-214ENST00000523777 ATP7BP35670 1465 aa22.77■■□□□ 1.24
TRAPPC9-214ENST00000523777 PRR36Q9H6K5 1346 aa22.77■■□□□ 1.24
TRAPPC9-214ENST00000523777 USP47Q96K76 1375 aa22.76■■□□□ 1.23
TRAPPC9-214ENST00000523777 SHPRHQ149N8 1683 aa22.75■■□□□ 1.23
TRAPPC9-214ENST00000523777 DDX17Q92841 729 aaKnown RBP22.75■■□□□ 1.23
TRAPPC9-214ENST00000523777 SPATA31A6Q5VVP1 1343 aa22.75■■□□□ 1.23
TRAPPC9-214ENST00000523777 ST20-MTHFSA0A0A6YYL1 179 aa22.73■■□□□ 1.23
TRAPPC9-214ENST00000523777 KRT28Q7Z3Y7 464 aa22.73■■□□□ 1.23
TRAPPC9-214ENST00000523777 NGDNQ8NEJ9 315 aaKnown RBP22.73■■□□□ 1.23
TRAPPC9-214ENST00000523777 PMFBP1Q8TBY8 1022 aa22.73■■□□□ 1.23
TRAPPC9-214ENST00000523777 PUS7Q96PZ0 661 aaKnown RBP22.73■■□□□ 1.23
TRAPPC9-214ENST00000523777 PXDNQ92626 1479 aa22.73■■□□□ 1.23
TRAPPC9-214ENST00000523777 TOPAZ1Q8N9V7 1692 aa22.72■■□□□ 1.23
TRAPPC9-214ENST00000523777 PLEKHG3A1L390 1219 aa22.72■■□□□ 1.23
TRAPPC9-214ENST00000523777 CABP2Q9NPB3 220 aa22.72■■□□□ 1.23
TRAPPC9-214ENST00000523777 ATAD2Q6PL18 1390 aa22.72■■□□□ 1.23
TRAPPC9-214ENST00000523777 SBNO1A3KN83 1393 aa22.7■■□□□ 1.22
TRAPPC9-214ENST00000523777 PPIP5K1Q6PFW1 1433 aa22.68■■□□□ 1.22
TRAPPC9-214ENST00000523777 POLR3AO14802 1390 aaPredicted RBP22.68■■□□□ 1.22
TRAPPC9-214ENST00000523777 TESK2Q96S53 571 aa22.68■■□□□ 1.22
TRAPPC9-214ENST00000523777 PNPLA6Q8IY17 1366 aa22.67■■□□□ 1.22
TRAPPC9-214ENST00000523777 SPATA31A3Q5VYP0 1347 aa22.66■■□□□ 1.22
TRAPPC9-214ENST00000523777 EIF4G2P78344 907 aaKnown RBP eCLIP22.66■■□□□ 1.227e-7■■■■■ 43.8
TRAPPC9-214ENST00000523777 TMF1P82094 1093 aa22.66■■□□□ 1.22
TRAPPC9-214ENST00000523777 XPCQ01831 940 aaPredicted RBP22.66■■□□□ 1.22
TRAPPC9-214ENST00000523777 CDCA8Q53HL2 280 aa22.66■■□□□ 1.22
TRAPPC9-214ENST00000523777 BRD4O60885 1362 aaPredicted RBP22.65■■□□□ 1.22
TRAPPC9-214ENST00000523777 ACEP12821 1306 aa22.65■■□□□ 1.22
TRAPPC9-214ENST00000523777 MED1Q15648 1581 aaPredicted RBP22.65■■□□□ 1.22
TRAPPC9-214ENST00000523777 ARHGEF10O15013 1369 aa22.64■■□□□ 1.22
TRAPPC9-214ENST00000523777 TNS3Q68CZ2 1445 aa22.64■■□□□ 1.21
TRAPPC9-214ENST00000523777 ZNF692Q9BU19 519 aaPredicted RBP22.63■■□□□ 1.21
TRAPPC9-214ENST00000523777 CABP1Q9NZU7 370 aa22.63■■□□□ 1.21
TRAPPC9-214ENST00000523777 COL22A1Q8NFW1 1626 aaPredicted RBP22.63■■□□□ 1.21
TRAPPC9-214ENST00000523777 NINLQ9Y2I6 1382 aa22.62■■□□□ 1.21
TRAPPC9-214ENST00000523777 TRPM3Q9HCF6 1732 aaPredicted RBP22.6■■□□□ 1.21
TRAPPC9-214ENST00000523777 MEX3CQ5U5Q3 659 aaKnown RBP22.59■■□□□ 1.21
TRAPPC9-214ENST00000523777 PHF23Q9BUL5 403 aaPredicted RBP22.59■■□□□ 1.21
TRAPPC9-214ENST00000523777 PAK3O75914 559 aaPredicted RBP22.58■■□□□ 1.21
TRAPPC9-214ENST00000523777 LMOD2Q6P5Q4 547 aa22.58■■□□□ 1.21
TRAPPC9-214ENST00000523777 NUTM2BA6NNL0 878 aaPredicted RBP22.57■■□□□ 1.2
TRAPPC9-214ENST00000523777 NUTM2EB1AL46 878 aaPredicted RBP22.57■■□□□ 1.2
TRAPPC9-214ENST00000523777 NUTM2AQ8IVF1 878 aaPredicted RBP22.57■■□□□ 1.2
TRAPPC9-214ENST00000523777 DISP3Q9P2K9 1392 aa22.57■■□□□ 1.2
TRAPPC9-214ENST00000523777 ALS2Q96Q42 1657 aa22.55■■□□□ 1.2
TRAPPC9-214ENST00000523777 TMC1Q8TDI8 760 aa22.55■■□□□ 1.2
TRAPPC9-214ENST00000523777 TERF2IPQ9NYB0 399 aa22.55■■□□□ 1.2
TRAPPC9-214ENST00000523777 USP6P35125 1406 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms