RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 NUTM2AQ8IVF1 878 aaPredicted RBP25.11■■□□□ 1.61
CCNC-213ENST00000523541 RGS17Q9UGC6 210 aaPredicted RBP25.11■■□□□ 1.61
CCNC-213ENST00000523541 LAMC1P11047 1609 aa25.11■■□□□ 1.61
CCNC-213ENST00000523541 WAPLQ7Z5K2 1190 aa25.1■■□□□ 1.61
CCNC-213ENST00000523541 DDX17Q92841 729 aaKnown RBP25.1■■□□□ 1.61
CCNC-213ENST00000523541 LRRC59Q96AG4 307 aaKnown RBP25.1■■□□□ 1.61
CCNC-213ENST00000523541 NHSL1Q5SYE7 1610 aa25.08■■□□□ 1.61
CCNC-213ENST00000523541 SHPRHQ149N8 1683 aa25.08■■□□□ 1.61
CCNC-213ENST00000523541 KDM2AQ9Y2K7 1162 aa25.08■■□□□ 1.61
CCNC-213ENST00000523541 ORAI2Q96SN7 254 aa25.06■■□□□ 1.6
CCNC-213ENST00000523541 KNDC1Q76NI1 1749 aa25.06■■□□□ 1.6
CCNC-213ENST00000523541 NUTM2FA1L443 756 aa25.04■■□□□ 1.6
CCNC-213ENST00000523541 ESCO1Q5FWF5 840 aa25.04■■□□□ 1.6
CCNC-213ENST00000523541 CDC42BPGQ6DT37 1551 aa25.04■■□□□ 1.6
CCNC-213ENST00000523541 LRP6O75581 1613 aa25.04■■□□□ 1.6
CCNC-213ENST00000523541 POTEAQ6S8J7 498 aa25.03■■□□□ 1.6
CCNC-213ENST00000523541 PLEKHH1Q9ULM0 1364 aa25.01■■□□□ 1.59
CCNC-213ENST00000523541 DLC1Q96QB1 1528 aa25.01■■□□□ 1.59
CCNC-213ENST00000523541 POGKQ9P215 609 aa25■■□□□ 1.59
CCNC-213ENST00000523541 SOS2Q07890 1332 aaPredicted RBP25■■□□□ 1.59
CCNC-213ENST00000523541 SAFB2Q14151 953 aaKnown RBP eCLIP24.99■■□□□ 1.59
CCNC-213ENST00000523541 PRAM1Q96QH2 718 aa24.99■■□□□ 1.59
CCNC-213ENST00000523541 NPHP3Q7Z494 1330 aa24.98■■□□□ 1.59
CCNC-213ENST00000523541 TRIM26Q12899 539 aaPredicted RBP24.98■■□□□ 1.59
CCNC-213ENST00000523541 ADGRB1O14514 1584 aa24.97■■□□□ 1.59
CCNC-213ENST00000523541 ZNF772Q68DY9 489 aaPredicted RBP24.97■■□□□ 1.59
CCNC-213ENST00000523541 PNPLA6Q8IY17 1366 aa24.95■■□□□ 1.59
CCNC-213ENST00000523541 TRAK1Q9UPV9 953 aa24.95■■□□□ 1.58
CCNC-213ENST00000523541 FOXO3O43524 673 aa24.92■■□□□ 1.58
CCNC-213ENST00000523541 XPCQ01831 940 aaPredicted RBP24.92■■□□□ 1.58
CCNC-213ENST00000523541 C8orf37Q96NL8 207 aa24.92■■□□□ 1.58
CCNC-213ENST00000523541 ADAMTS2O95450 1211 aa24.91■■□□□ 1.58
CCNC-213ENST00000523541 FMN2Q9NZ56 1722 aa24.9■■□□□ 1.58
CCNC-213ENST00000523541 AFF2P51816 1311 aa24.89■■□□□ 1.58
CCNC-213ENST00000523541 EIF3AQ14152 1382 aaKnown RBP24.88■■□□□ 1.57
CCNC-213ENST00000523541 L3MBTL2Q969R5 705 aa24.86■■□□□ 1.57
CCNC-213ENST00000523541 NGLY1Q96IV0 654 aa24.86■■□□□ 1.57
CCNC-213ENST00000523541 ANKARQ7Z5J8 1434 aa24.86■■□□□ 1.57
CCNC-213ENST00000523541 PHF8Q9UPP1 1060 aa24.85■■□□□ 1.57
CCNC-213ENST00000523541 KIAA1210Q9ULL0 1709 aa24.85■■□□□ 1.57
CCNC-213ENST00000523541 PSME1Q06323 249 aa24.84■■□□□ 1.57
CCNC-213ENST00000523541 SIN3AQ96ST3 1273 aa24.84■■□□□ 1.57
CCNC-213ENST00000523541 HIRIP3Q9BW71 556 aaPredicted RBP24.84■■□□□ 1.57
CCNC-213ENST00000523541 KIF1AQ12756 1690 aa24.84■■□□□ 1.57
CCNC-213ENST00000523541 WASLO00401 505 aaPredicted RBP24.83■■□□□ 1.57
CCNC-213ENST00000523541 RXRBP28702 533 aa24.83■■□□□ 1.57
CCNC-213ENST00000523541 ADGRB2O60241 1585 aa24.83■■□□□ 1.57
CCNC-213ENST00000523541 MINK1Q8N4C8 1332 aaPredicted RBP24.83■■□□□ 1.56
CCNC-213ENST00000523541 PXDNQ92626 1479 aa24.83■■□□□ 1.56
CCNC-213ENST00000523541 KRT28Q7Z3Y7 464 aa24.81■■□□□ 1.56
CCNC-213ENST00000523541 NEUROD1Q13562 356 aa24.8■■□□□ 1.56
CCNC-213ENST00000523541 NBPF1Q3BBV0 1214 aa24.79■■□□□ 1.56
CCNC-213ENST00000523541 RGPD8O14715 1765 aaPredicted RBP24.79■■□□□ 1.56
CCNC-213ENST00000523541 PLEKHG5O94827 1062 aa24.78■■□□□ 1.56
CCNC-213ENST00000523541 LMOD2Q6P5Q4 547 aa24.78■■□□□ 1.56
CCNC-213ENST00000523541 QTRT2Q9H974 415 aaKnown RBP24.78■■□□□ 1.56
CCNC-213ENST00000523541 SPATA31A3Q5VYP0 1347 aa24.78■■□□□ 1.56
CCNC-213ENST00000523541 HAP1P54257 671 aaPredicted RBP24.77■■□□□ 1.56
CCNC-213ENST00000523541 COL22A1Q8NFW1 1626 aaPredicted RBP24.76■■□□□ 1.55
CCNC-213ENST00000523541 PMFBP1Q8TBY8 1022 aa24.76■■□□□ 1.55
CCNC-213ENST00000523541 USP21Q9UK80 565 aa24.75■■□□□ 1.55
CCNC-213ENST00000523541 SBNO1A3KN83 1393 aa24.75■■□□□ 1.55
CCNC-213ENST00000523541 TULP4Q9NRJ4 1543 aa24.73■■□□□ 1.55
CCNC-213ENST00000523541 RBM6P78332 1123 aaKnown RBP24.71■■□□□ 1.55
CCNC-213ENST00000523541 FNBP4Q8N3X1 1017 aaPredicted RBP24.71■■□□□ 1.55
CCNC-213ENST00000523541 CDK19Q9BWU1 502 aa24.71■■□□□ 1.55
CCNC-213ENST00000523541 ARHGEF28Q8N1W1 1705 aaKnown RBP24.71■■□□□ 1.55
CCNC-213ENST00000523541 PRR36Q9H6K5 1346 aa24.7■■□□□ 1.54
CCNC-213ENST00000523541 NUDT16Q96DE0 195 aaKnown RBP24.7■■□□□ 1.54
CCNC-213ENST00000523541 TNS3Q68CZ2 1445 aa24.69■■□□□ 1.54
CCNC-213ENST00000523541 GPRASP1Q5JY77 1395 aa24.69■■□□□ 1.54
CCNC-213ENST00000523541 CENPJQ9HC77 1338 aaPredicted RBP24.69■■□□□ 1.54
CCNC-213ENST00000523541 ARHGEF10O15013 1369 aa24.68■■□□□ 1.54
CCNC-213ENST00000523541 USP32Q8NFA0 1604 aa24.68■■□□□ 1.54
CCNC-213ENST00000523541 NGDNQ8NEJ9 315 aaKnown RBP24.68■■□□□ 1.54
CCNC-213ENST00000523541 TRPC5Q9UL62 973 aaPredicted RBP24.68■■□□□ 1.54
CCNC-213ENST00000523541 CCDC61Q9Y6R9 512 aa24.68■■□□□ 1.54
CCNC-213ENST00000523541 CDK12Q9NYV4 1490 aaPredicted RBP24.66■■□□□ 1.54
CCNC-213ENST00000523541 MARF1Q9Y4F3 1742 aaKnown RBP24.64■■□□□ 1.54
CCNC-213ENST00000523541 CABLES1Q8TDN4 633 aa24.64■■□□□ 1.54
CCNC-213ENST00000523541 ROCK2O75116 1388 aaKnown RBP24.64■■□□□ 1.53
CCNC-213ENST00000523541 TONSLQ96HA7 1378 aa24.64■■□□□ 1.53
CCNC-213ENST00000523541 PLEKHG3A1L390 1219 aa24.63■■□□□ 1.53
CCNC-213ENST00000523541 PAK3O75914 559 aaPredicted RBP24.63■■□□□ 1.53
CCNC-213ENST00000523541 ATP7BP35670 1465 aa24.62■■□□□ 1.53
CCNC-213ENST00000523541 RGS12O14924 1447 aa24.61■■□□□ 1.53
CCNC-213ENST00000523541 ITSN1Q15811 1721 aa24.6■■□□□ 1.53
CCNC-213ENST00000523541 NBPF8Q3BBV2 869 aa24.59■■□□□ 1.53
CCNC-213ENST00000523541 TRPM1Q7Z4N2 1603 aa24.59■■□□□ 1.53
CCNC-213ENST00000523541 POLR3AO14802 1390 aaPredicted RBP24.58■■□□□ 1.53
CCNC-213ENST00000523541 SRPK2P78362 688 aaKnown RBP24.58■■□□□ 1.53
CCNC-213ENST00000523541 ATRNO75882 1429 aa24.57■■□□□ 1.52
CCNC-213ENST00000523541 EVC2Q86UK5 1308 aa24.57■■□□□ 1.52
CCNC-213ENST00000523541 UPF1Q92900 1129 aaKnown RBP eCLIP24.56■■□□□ 1.52
CCNC-213ENST00000523541 UNC5CLQ8IV45 518 aa24.55■■□□□ 1.52
CCNC-213ENST00000523541 CCDC9Q9Y3X0 531 aaKnown RBP24.55■■□□□ 1.52
CCNC-213ENST00000523541 BCL9LQ86UU0 1499 aa24.55■■□□□ 1.52
CCNC-213ENST00000523541 ACEP12821 1306 aa24.55■■□□□ 1.52
CCNC-213ENST00000523541 BRD4O60885 1362 aaPredicted RBP24.54■■□□□ 1.52
CCNC-213ENST00000523541 TRPM3Q9HCF6 1732 aaPredicted RBP24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 171.2 ms