RNA–Protein interactions for RNA: ENST00000523517.5

IKBKB-228, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 1 (best)

Gene IKBKB, Length 2,378 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-228ENST00000523517 NEFMP07197 916 aa23.17■■□□□ 1.3
IKBKB-228ENST00000523517 CGNL1Q0VF96 1302 aa23.16■■□□□ 1.3
IKBKB-228ENST00000523517 NINLQ9Y2I6 1382 aa23.16■■□□□ 1.3
IKBKB-228ENST00000523517 RGS3P49796 1198 aa23.16■■□□□ 1.3
IKBKB-228ENST00000523517 PPLO60437 1756 aa23.15■■□□□ 1.3
IKBKB-228ENST00000523517 ABCC3O15438 1527 aa23.14■■□□□ 1.3
IKBKB-228ENST00000523517 QRICH2Q9H0J4 1663 aa23.14■■□□□ 1.3
IKBKB-228ENST00000523517 ZC3H13Q5T200 1668 aaKnown RBP23.13■■□□□ 1.29
IKBKB-228ENST00000523517 CFAP74Q9C0B2 1584 aa23.13■■□□□ 1.29
IKBKB-228ENST00000523517 PUS7Q96PZ0 661 aaKnown RBP23.13■■□□□ 1.29
IKBKB-228ENST00000523517 IGHDP01880 384 aa23.13■■□□□ 1.29
IKBKB-228ENST00000523517 TCP11L2Q8N4U5 519 aa23.13■■□□□ 1.29
IKBKB-228ENST00000523517 PHF23Q9BUL5 403 aaPredicted RBP23.13■■□□□ 1.29
IKBKB-228ENST00000523517 HECW2Q9P2P5 1572 aa23.12■■□□□ 1.29
IKBKB-228ENST00000523517 MTHFSP49914 203 aa23.12■■□□□ 1.29
IKBKB-228ENST00000523517 RRP7AQ9Y3A4 280 aaKnown RBP23.12■■□□□ 1.29
IKBKB-228ENST00000523517 SHPRHQ149N8 1683 aa23.12■■□□□ 1.29
IKBKB-228ENST00000523517 CANXP27824 592 aaKnown RBP23.12■■□□□ 1.29
IKBKB-228ENST00000523517 NEUROD2Q15784 382 aa23.12■■□□□ 1.29
IKBKB-228ENST00000523517 IQSEC2Q5JU85 1478 aa23.11■■□□□ 1.29
IKBKB-228ENST00000523517 EVC2Q86UK5 1308 aa23.11■■□□□ 1.29
IKBKB-228ENST00000523517 CFAP53Q96M91 514 aa23.11■■□□□ 1.29
IKBKB-228ENST00000523517 WDR63Q8IWG1 891 aa23.1■■□□□ 1.29
IKBKB-228ENST00000523517 PANK1Q8TE04 598 aa23.1■■□□□ 1.29
IKBKB-228ENST00000523517 CLUAP1Q96AJ1 413 aa23.1■■□□□ 1.29
IKBKB-228ENST00000523517 USP32Q8NFA0 1604 aa23.1■■□□□ 1.29
IKBKB-228ENST00000523517 VGFO15240 615 aaPredicted RBP23.09■■□□□ 1.29
IKBKB-228ENST00000523517 COG6Q9Y2V7 657 aa23.09■■□□□ 1.29
IKBKB-228ENST00000523517 RARSP54136 660 aaKnown RBP23.08■■□□□ 1.29
IKBKB-228ENST00000523517 CCDC27Q2M243 656 aa23.07■■□□□ 1.28
IKBKB-228ENST00000523517 DAXXQ9UER7 740 aaPredicted RBP23.07■■□□□ 1.28
IKBKB-228ENST00000523517 NUTM2DQ5VT03 806 aaPredicted RBP23.07■■□□□ 1.28
IKBKB-228ENST00000523517 ANKRD36BQ8N2N9 1353 aa23.07■■□□□ 1.28
IKBKB-228ENST00000523517 SLC4A3P48751 1232 aa23.06■■□□□ 1.28
IKBKB-228ENST00000523517 NSD2O96028 1365 aa23.06■■□□□ 1.28
IKBKB-228ENST00000523517 FRAT1Q92837 279 aaPredicted RBP23.06■■□□□ 1.28
IKBKB-228ENST00000523517 GLI2P10070 1586 aa23.05■■□□□ 1.28
IKBKB-228ENST00000523517 TULP4Q9NRJ4 1543 aa23.04■■□□□ 1.28
IKBKB-228ENST00000523517 NCBP3Q53F19 620 aaKnown RBP23.04■■□□□ 1.28
IKBKB-228ENST00000523517 RAPGEF3O95398 923 aa23.03■■□□□ 1.28
IKBKB-228ENST00000523517 CAMSAP1Q5T5Y3 1602 aa23.03■■□□□ 1.28
IKBKB-228ENST00000523517 NEXMIFQ5QGS0 1516 aa23.03■■□□□ 1.28
IKBKB-228ENST00000523517 AAMPQ13685 434 aa23.02■■□□□ 1.28
IKBKB-228ENST00000523517 MAPK8IP3Q9UPT6 1336 aa23.02■■□□□ 1.28
IKBKB-228ENST00000523517 OSCARQ8IYS5 282 aa23.01■■□□□ 1.27
IKBKB-228ENST00000523517 CABP2Q9NPB3 220 aa23.01■■□□□ 1.27
IKBKB-228ENST00000523517 PIK3C2BO00750 1634 aa23.01■■□□□ 1.27
IKBKB-228ENST00000523517 CFAP65Q6ZU64 1925 aaKnown RBP23.01■■□□□ 1.27
IKBKB-228ENST00000523517 NEO1Q92859 1461 aa23■■□□□ 1.27
IKBKB-228ENST00000523517 SIGLEC1Q9BZZ2 1709 aa22.99■■□□□ 1.27
IKBKB-228ENST00000523517 U2AF1L5P0DN76 240 aaPredicted RBP22.99■■□□□ 1.27
IKBKB-228ENST00000523517 U2AF1Q01081 240 aaKnown RBP eCLIP22.99■■□□□ 1.27
IKBKB-228ENST00000523517 MYH16Q9H6N6 1097 aa22.99■■□□□ 1.27
IKBKB-228ENST00000523517 ARHGAP31Q2M1Z3 1444 aa22.99■■□□□ 1.27
IKBKB-228ENST00000523517 IDI1Q13907 227 aa22.99■■□□□ 1.27
IKBKB-228ENST00000523517 RLBP1P12271 317 aa22.98■■□□□ 1.27
IKBKB-228ENST00000523517 PMFBP1Q8TBY8 1022 aa22.98■■□□□ 1.27
IKBKB-228ENST00000523517 NFKBIBQ15653 356 aa22.97■■□□□ 1.27
IKBKB-228ENST00000523517 ARHGEF28Q8N1W1 1705 aaKnown RBP22.97■■□□□ 1.27
IKBKB-228ENST00000523517 SAFB2Q14151 953 aaKnown RBP eCLIP22.97■■□□□ 1.27
IKBKB-228ENST00000523517 ZFYVE9O95405 1425 aa22.96■■□□□ 1.27
IKBKB-228ENST00000523517 BCL2L13Q9BXK5 485 aa22.96■■□□□ 1.27
IKBKB-228ENST00000523517 TNNQ9UQP3 1299 aa22.96■■□□□ 1.27
IKBKB-228ENST00000523517 SLC52A1Q9NWF4 448 aa22.95■■□□□ 1.26
IKBKB-228ENST00000523517 PCDHB15Q9Y5E8 787 aa22.95■■□□□ 1.26
IKBKB-228ENST00000523517 DIP2CQ9Y2E4 1556 aa22.94■■□□□ 1.26
IKBKB-228ENST00000523517 USP19O94966 1318 aa22.94■■□□□ 1.26
IKBKB-228ENST00000523517 ABCC11Q96J66 1382 aa22.94■■□□□ 1.26
IKBKB-228ENST00000523517 STK26Q9P289 416 aa22.93■■□□□ 1.26
IKBKB-228ENST00000523517 A0A1W2PP64 1363 aa22.93■■□□□ 1.26
IKBKB-228ENST00000523517 SRPK2P78362 688 aaKnown RBP22.92■■□□□ 1.26
IKBKB-228ENST00000523517 ADGRB2O60241 1585 aa22.9■■□□□ 1.26
IKBKB-228ENST00000523517 GGNBP2Q9H3C7 697 aa22.9■■□□□ 1.26
IKBKB-228ENST00000523517 SEC24BO95487 1268 aa22.89■■□□□ 1.26
IKBKB-228ENST00000523517 CT47B1P0C2W7 299 aaPredicted RBP22.89■■□□□ 1.26
IKBKB-228ENST00000523517 PLEKHF1Q96S99 279 aa22.89■■□□□ 1.26
IKBKB-228ENST00000523517 RWDD1Q9H446 243 aaPredicted RBP22.89■■□□□ 1.25
IKBKB-228ENST00000523517 U2SURPO15042 1029 aaKnown RBP22.87■■□□□ 1.25
IKBKB-228ENST00000523517 MVPQ14764 893 aaKnown RBP22.87■■□□□ 1.25
IKBKB-228ENST00000523517 ZKSCAN2Q63HK3 967 aa22.87■■□□□ 1.25
IKBKB-228ENST00000523517 ATAD2Q6PL18 1390 aa22.87■■□□□ 1.25
IKBKB-228ENST00000523517 SENP3Q9H4L4 574 aaPredicted RBP22.87■■□□□ 1.25
IKBKB-228ENST00000523517 TERF2IPQ9NYB0 399 aa22.87■■□□□ 1.25
IKBKB-228ENST00000523517 ZMYM3Q14202 1370 aa22.87■■□□□ 1.25
IKBKB-228ENST00000523517 PDZRN3Q9UPQ7 1066 aa22.86■■□□□ 1.25
IKBKB-228ENST00000523517 PTPRMP28827 1452 aa22.86■■□□□ 1.25
IKBKB-228ENST00000523517 TMPOP42166 694 aaKnown RBP22.86■■□□□ 1.25
IKBKB-228ENST00000523517 FYB1O15117 783 aa22.85■■□□□ 1.25
IKBKB-228ENST00000523517 GSE1Q14687 1217 aa22.85■■□□□ 1.25
IKBKB-228ENST00000523517 TSR2Q969E8 191 aaKnown RBP22.85■■□□□ 1.25
IKBKB-228ENST00000523517 PRAM1Q96QH2 718 aa22.85■■□□□ 1.25
IKBKB-228ENST00000523517 YEATS2Q9ULM3 1422 aa22.85■■□□□ 1.25
IKBKB-228ENST00000523517 MINK1Q8N4C8 1332 aaPredicted RBP22.85■■□□□ 1.25
IKBKB-228ENST00000523517 COL3A1P02461 1466 aaPredicted RBP22.85■■□□□ 1.25
IKBKB-228ENST00000523517 DZIP1LQ8IYY4 767 aaKnown RBP22.84■■□□□ 1.25
IKBKB-228ENST00000523517 TRIM35Q9UPQ4 493 aa22.84■■□□□ 1.25
IKBKB-228ENST00000523517 POGKQ9P215 609 aa22.84■■□□□ 1.25
IKBKB-228ENST00000523517 FTSJ3Q8IY81 847 aaKnown RBP22.83■■□□□ 1.25
IKBKB-228ENST00000523517 MED14O60244 1454 aa22.83■■□□□ 1.24
IKBKB-228ENST00000523517 EXOSC9Q06265 439 aaKnown RBP22.83■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms