RNA–Protein interactions for RNA: ENST00000523338.5

TNIP1-218, Transcript of TNFAIP3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNIP1, Length 2,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-218ENST00000523338 NRXN1Q9ULB1 1477 aa16.36■□□□□ 0.21
TNIP1-218ENST00000523338 U2AF1L5P0DN76 240 aaPredicted RBP16.36■□□□□ 0.21
TNIP1-218ENST00000523338 U2AF1Q01081 240 aaKnown RBP eCLIP16.36■□□□□ 0.21
TNIP1-218ENST00000523338 EVC2Q86UK5 1308 aa16.36■□□□□ 0.21
TNIP1-218ENST00000523338 KIAA1210Q9ULL0 1709 aa16.36■□□□□ 0.21
TNIP1-218ENST00000523338 PANK1Q8TE04 598 aa16.36■□□□□ 0.21
TNIP1-218ENST00000523338 BACH2Q9BYV9 841 aa16.36■□□□□ 0.21
TNIP1-218ENST00000523338 POGKQ9P215 609 aa16.36■□□□□ 0.21
TNIP1-218ENST00000523338 LMTK2Q8IWU2 1503 aa16.36■□□□□ 0.21
TNIP1-218ENST00000523338 FBLN1P23142 703 aa16.35■□□□□ 0.21
TNIP1-218ENST00000523338 PRAM1Q96QH2 718 aa16.35■□□□□ 0.21
TNIP1-218ENST00000523338 CGNL1Q0VF96 1302 aa16.35■□□□□ 0.21
TNIP1-218ENST00000523338 INSRP06213 1382 aa16.35■□□□□ 0.21
TNIP1-218ENST00000523338 E9PSI1 815 aa16.35■□□□□ 0.21
TNIP1-218ENST00000523338 U2SURPO15042 1029 aaKnown RBP16.35■□□□□ 0.21
TNIP1-218ENST00000523338 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.35■□□□□ 0.21
TNIP1-218ENST00000523338 SIGLEC1Q9BZZ2 1709 aa16.34■□□□□ 0.21
TNIP1-218ENST00000523338 IFT172Q9UG01 1749 aa16.34■□□□□ 0.21
TNIP1-218ENST00000523338 COG6Q9Y2V7 657 aa16.34■□□□□ 0.21
TNIP1-218ENST00000523338 RPGRIP1LQ68CZ1 1315 aa16.33■□□□□ 0.21
TNIP1-218ENST00000523338 TNNQ9UQP3 1299 aa16.33■□□□□ 0.21
TNIP1-218ENST00000523338 TRMT2AQ8IZ69 625 aaKnown RBP16.33■□□□□ 0.2
TNIP1-218ENST00000523338 ADGRB1O14514 1584 aa16.33■□□□□ 0.2
TNIP1-218ENST00000523338 CLUAP1Q96AJ1 413 aa16.32■□□□□ 0.2
TNIP1-218ENST00000523338 PPM1GO15355 546 aaPredicted RBP16.32■□□□□ 0.2
TNIP1-218ENST00000523338 UBE2Q2Q8WVN8 375 aa16.32■□□□□ 0.2
TNIP1-218ENST00000523338 LAS1LQ9Y4W2 734 aaKnown RBP16.32■□□□□ 0.2
TNIP1-218ENST00000523338 QRICH2Q9H0J4 1663 aa16.32■□□□□ 0.2
TNIP1-218ENST00000523338 PPLO60437 1756 aa16.31■□□□□ 0.2
TNIP1-218ENST00000523338 SLC4A3P48751 1232 aa16.31■□□□□ 0.2
TNIP1-218ENST00000523338 RUNDC1Q96C34 613 aa16.31■□□□□ 0.2
TNIP1-218ENST00000523338 SBNO2Q9Y2G9 1366 aa16.3■□□□□ 0.2
TNIP1-218ENST00000523338 NKTRP30414 1462 aaKnown RBP16.3■□□□□ 0.2
TNIP1-218ENST00000523338 WAPLQ7Z5K2 1190 aa16.3■□□□□ 0.2
TNIP1-218ENST00000523338 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.3■□□□□ 0.2
TNIP1-218ENST00000523338 CFAP53Q96M91 514 aa16.3■□□□□ 0.2
TNIP1-218ENST00000523338 POLR3AO14802 1390 aaPredicted RBP16.29■□□□□ 0.2
TNIP1-218ENST00000523338 KDM2BQ8NHM5 1336 aa16.29■□□□□ 0.2
TNIP1-218ENST00000523338 CAMSAP1Q5T5Y3 1602 aa16.29■□□□□ 0.2
TNIP1-218ENST00000523338 IGHDP01880 384 aa16.29■□□□□ 0.2
TNIP1-218ENST00000523338 DIP2CQ9Y2E4 1556 aa16.28■□□□□ 0.2
TNIP1-218ENST00000523338 NEURL4Q96JN8 1562 aa16.28■□□□□ 0.2
TNIP1-218ENST00000523338 TSR2Q969E8 191 aaKnown RBP16.28■□□□□ 0.2
TNIP1-218ENST00000523338 SLC52A1Q9NWF4 448 aa16.28■□□□□ 0.2
TNIP1-218ENST00000523338 CENPQQ7L2Z9 268 aaPredicted RBP16.27■□□□□ 0.2
TNIP1-218ENST00000523338 CABP1Q9NZU7 370 aa16.27■□□□□ 0.2
TNIP1-218ENST00000523338 CFAP74Q9C0B2 1584 aa16.27■□□□□ 0.2
TNIP1-218ENST00000523338 NEO1Q92859 1461 aa16.27■□□□□ 0.2
TNIP1-218ENST00000523338 GLI2P10070 1586 aa16.27■□□□□ 0.19
TNIP1-218ENST00000523338 A0A1W2PP64 1363 aa16.27■□□□□ 0.19
TNIP1-218ENST00000523338 MS4A1P11836 297 aa16.26■□□□□ 0.19
TNIP1-218ENST00000523338 SETBP1Q9Y6X0 1596 aa16.26■□□□□ 0.19
TNIP1-218ENST00000523338 PLPPR3Q6T4P5 718 aa16.26■□□□□ 0.19
TNIP1-218ENST00000523338 NEXMIFQ5QGS0 1516 aa16.25■□□□□ 0.19
TNIP1-218ENST00000523338 TULP4Q9NRJ4 1543 aa16.25■□□□□ 0.19
TNIP1-218ENST00000523338 CDK19Q9BWU1 502 aa16.25■□□□□ 0.19
TNIP1-218ENST00000523338 TSPOAP1O95153 1857 aa16.24■□□□□ 0.19
TNIP1-218ENST00000523338 FYB1O15117 783 aa16.24■□□□□ 0.19
TNIP1-218ENST00000523338 RLBP1P12271 317 aa16.24■□□□□ 0.19
TNIP1-218ENST00000523338 ANKRD36BQ8N2N9 1353 aa16.24■□□□□ 0.19
TNIP1-218ENST00000523338 MYO3AQ8NEV4 1616 aa16.23■□□□□ 0.19
TNIP1-218ENST00000523338 RARSP54136 660 aaKnown RBP16.23■□□□□ 0.19
TNIP1-218ENST00000523338 MYO5BQ9ULV0 1848 aa16.23■□□□□ 0.19
TNIP1-218ENST00000523338 NCKAP5LQ9HCH0 1330 aa16.21■□□□□ 0.19
TNIP1-218ENST00000523338 PIK3C2BO00750 1634 aa16.21■□□□□ 0.19
TNIP1-218ENST00000523338 TERF2IPQ9NYB0 399 aa16.2■□□□□ 0.18
TNIP1-218ENST00000523338 DEKP35659 375 aaKnown RBP16.2■□□□□ 0.18
TNIP1-218ENST00000523338 RICTORQ6R327 1708 aa16.19■□□□□ 0.18
TNIP1-218ENST00000523338 YTHDC2Q9H6S0 1430 aaKnown RBP16.18■□□□□ 0.18
TNIP1-218ENST00000523338 NUTM2FA1L443 756 aa16.18■□□□□ 0.18
TNIP1-218ENST00000523338 ZC3H13Q5T200 1668 aaKnown RBP16.18■□□□□ 0.18
TNIP1-218ENST00000523338 ARHGEF28Q8N1W1 1705 aaKnown RBP16.18■□□□□ 0.18
TNIP1-218ENST00000523338 C8orf34Q49A92 452 aa16.18■□□□□ 0.18
TNIP1-218ENST00000523338 ZRANB1Q9UGI0 708 aa16.18■□□□□ 0.18
TNIP1-218ENST00000523338 SHPRHQ149N8 1683 aa16.18■□□□□ 0.18
TNIP1-218ENST00000523338 TXNDC2Q86VQ3 553 aa16.18■□□□□ 0.18
TNIP1-218ENST00000523338 HDGFL2Q7Z4V5 671 aaPredicted RBP16.17■□□□□ 0.18
TNIP1-218ENST00000523338 PCDHB15Q9Y5E8 787 aa16.17■□□□□ 0.18
TNIP1-218ENST00000523338 HMOX1P09601 288 aa16.17■□□□□ 0.18
TNIP1-218ENST00000523338 EXOSC9Q06265 439 aaKnown RBP16.17■□□□□ 0.18
TNIP1-218ENST00000523338 MAPK8IP3Q9UPT6 1336 aa16.16■□□□□ 0.18
TNIP1-218ENST00000523338 EIF5BO60841 1220 aaKnown RBP16.16■□□□□ 0.18
TNIP1-218ENST00000523338 FAM161AQ3B820 660 aa16.16■□□□□ 0.18
TNIP1-218ENST00000523338 RTL5Q5HYW3 569 aaPredicted RBP16.16■□□□□ 0.18
TNIP1-218ENST00000523338 RIPK4P57078 832 aa16.16■□□□□ 0.18
TNIP1-218ENST00000523338 WDR63Q8IWG1 891 aa16.16■□□□□ 0.18
TNIP1-218ENST00000523338 ARHGAP31Q2M1Z3 1444 aa16.16■□□□□ 0.18
TNIP1-218ENST00000523338 TMPOP42166 694 aaKnown RBP16.15■□□□□ 0.18
TNIP1-218ENST00000523338 PDE3AQ14432 1141 aa16.15■□□□□ 0.18
TNIP1-218ENST00000523338 ESF1Q9H501 851 aaKnown RBP16.15■□□□□ 0.18
TNIP1-218ENST00000523338 MYH16Q9H6N6 1097 aa16.14■□□□□ 0.17
TNIP1-218ENST00000523338 PTPRMP28827 1452 aa16.14■□□□□ 0.17
TNIP1-218ENST00000523338 DIAPH1O60610 1272 aaKnown RBP16.14■□□□□ 0.17
TNIP1-218ENST00000523338 NEFMP07197 916 aa16.14■□□□□ 0.17
TNIP1-218ENST00000523338 NGEFQ8N5V2 710 aa16.14■□□□□ 0.17
TNIP1-218ENST00000523338 THUMPD2Q9BTF0 503 aaKnown RBP16.14■□□□□ 0.17
TNIP1-218ENST00000523338 PHF23Q9BUL5 403 aaPredicted RBP16.14■□□□□ 0.17
TNIP1-218ENST00000523338 SMC4Q9NTJ3 1288 aa16.14■□□□□ 0.17
TNIP1-218ENST00000523338 TRIM35Q9UPQ4 493 aa16.14■□□□□ 0.17
TNIP1-218ENST00000523338 ABCC11Q96J66 1382 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms