RNA–Protein interactions for RNA: ENST00000523055.5

PCM1-218, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-218ENST00000523055 ZNF326Q5BKZ1 582 aaKnown RBP22.57■■□□□ 1.2
PCM1-218ENST00000523055 MYOM2P54296 1465 aa22.56■■□□□ 1.2
PCM1-218ENST00000523055 ROBO2Q9HCK4 1378 aa22.56■■□□□ 1.2
PCM1-218ENST00000523055 SLC4A1APQ9BWU0 796 aaKnown RBP22.56■■□□□ 1.2
PCM1-218ENST00000523055 CCDC125Q86Z20 511 aa22.54■■□□□ 1.2
PCM1-218ENST00000523055 FOXD1Q16676 465 aa22.52■■□□□ 1.2
PCM1-218ENST00000523055 PRAG1Q86YV5 1406 aa22.52■■□□□ 1.2
PCM1-218ENST00000523055 RAB3GAP2Q9H2M9 1393 aa22.49■■□□□ 1.19
PCM1-218ENST00000523055 GJD4Q96KN9 370 aaPredicted RBP22.48■■□□□ 1.19
PCM1-218ENST00000523055 PXDNQ92626 1479 aa22.48■■□□□ 1.19
PCM1-218ENST00000523055 MPHOSPH9Q99550 1183 aa22.46■■□□□ 1.19
PCM1-218ENST00000523055 MARF1Q9Y4F3 1742 aaKnown RBP22.45■■□□□ 1.18
PCM1-218ENST00000523055 PPLO60437 1756 aa22.44■■□□□ 1.18
PCM1-218ENST00000523055 GLI3P10071 1580 aa22.43■■□□□ 1.18
PCM1-218ENST00000523055 BLMP54132 1417 aaPredicted RBP22.43■■□□□ 1.18
PCM1-218ENST00000523055 NPHP3Q7Z494 1330 aa22.42■■□□□ 1.18
PCM1-218ENST00000523055 DEFB132Q7Z7B7 95 aa22.41■■□□□ 1.18
PCM1-218ENST00000523055 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.41■■□□□ 1.18
PCM1-218ENST00000523055 RALGAPBQ86X10 1494 aa22.41■■□□□ 1.18
PCM1-218ENST00000523055 SLIT2O94813 1529 aa22.4■■□□□ 1.18
PCM1-218ENST00000523055 XPCQ01831 940 aaPredicted RBP22.4■■□□□ 1.18
PCM1-218ENST00000523055 ESCO1Q5FWF5 840 aa22.4■■□□□ 1.18
PCM1-218ENST00000523055 CDC42BPGQ6DT37 1551 aa22.39■■□□□ 1.17
PCM1-218ENST00000523055 FOXO3O43524 673 aa22.39■■□□□ 1.17
PCM1-218ENST00000523055 IFT172Q9UG01 1749 aa22.39■■□□□ 1.17
PCM1-218ENST00000523055 UNC5CLQ8IV45 518 aa22.38■■□□□ 1.17
PCM1-218ENST00000523055 BRWD3Q6RI45 1802 aa22.37■■□□□ 1.17
PCM1-218ENST00000523055 VGFO15240 615 aaPredicted RBP22.37■■□□□ 1.17
PCM1-218ENST00000523055 CCDC144AA2RUR9 1427 aa22.37■■□□□ 1.17
PCM1-218ENST00000523055 LRP5O75197 1615 aa22.36■■□□□ 1.17
PCM1-218ENST00000523055 SPATA31E1Q6ZUB1 1445 aa22.33■■□□□ 1.16
PCM1-218ENST00000523055 SPATA31A3Q5VYP0 1347 aa22.31■■□□□ 1.16
PCM1-218ENST00000523055 RPGRIP1LQ68CZ1 1315 aa22.3■■□□□ 1.16
PCM1-218ENST00000523055 SEPT12Q8IYM1 358 aa22.3■■□□□ 1.16
PCM1-218ENST00000523055 NUTM2FA1L443 756 aa22.29■■□□□ 1.16
PCM1-218ENST00000523055 ONECUT3O60422 494 aaPredicted RBP22.29■■□□□ 1.16
PCM1-218ENST00000523055 LRPPRCP42704 1394 aaKnown RBP22.28■■□□□ 1.16
PCM1-218ENST00000523055 USP32Q8NFA0 1604 aa22.28■■□□□ 1.16
PCM1-218ENST00000523055 ACIN1Q9UKV3 1341 aaKnown RBP22.28■■□□□ 1.16
PCM1-218ENST00000523055 RGL3Q3MIN7 710 aa22.27■■□□□ 1.16
PCM1-218ENST00000523055 WAPLQ7Z5K2 1190 aa22.27■■□□□ 1.16
PCM1-218ENST00000523055 TECPR2O15040 1411 aa22.26■■□□□ 1.15
PCM1-218ENST00000523055 VPS72Q15906 364 aa22.25■■□□□ 1.15
PCM1-218ENST00000523055 PLEKHH1Q9ULM0 1364 aa22.24■■□□□ 1.15
PCM1-218ENST00000523055 HRCP23327 699 aa22.23■■□□□ 1.15
PCM1-218ENST00000523055 PSDA5PKW4 1024 aaPredicted RBP22.23■■□□□ 1.15
PCM1-218ENST00000523055 SF3B2Q13435 895 aaKnown RBP22.23■■□□□ 1.15
PCM1-218ENST00000523055 ADGRF5Q8IZF2 1346 aa22.22■■□□□ 1.15
PCM1-218ENST00000523055 ANKRD30BQ9BXX2 1392 aa22.22■■□□□ 1.15
PCM1-218ENST00000523055 KRT27Q7Z3Y8 459 aa22.22■■□□□ 1.15
PCM1-218ENST00000523055 CABLES1Q8TDN4 633 aa22.21■■□□□ 1.15
PCM1-218ENST00000523055 FMN2Q9NZ56 1722 aa22.21■■□□□ 1.15
PCM1-218ENST00000523055 KRT28Q7Z3Y7 464 aa22.2■■□□□ 1.14
PCM1-218ENST00000523055 ABCC11Q96J66 1382 aa22.19■■□□□ 1.14
PCM1-218ENST00000523055 STK26Q9P289 416 aa22.19■■□□□ 1.14
PCM1-218ENST00000523055 KIF1AQ12756 1690 aa22.19■■□□□ 1.14
PCM1-218ENST00000523055 PLCH1Q4KWH8 1693 aa22.19■■□□□ 1.14
PCM1-218ENST00000523055 NWD2Q9ULI1 1742 aa22.19■■□□□ 1.14
PCM1-218ENST00000523055 TNS3Q68CZ2 1445 aa22.18■■□□□ 1.14
PCM1-218ENST00000523055 PIK3C2GO75747 1445 aa22.16■■□□□ 1.14
PCM1-218ENST00000523055 KNDC1Q76NI1 1749 aa22.15■■□□□ 1.14
PCM1-218ENST00000523055 ABCA3Q99758 1704 aa22.15■■□□□ 1.14
PCM1-218ENST00000523055 TMEM132EQ6IEE7 984 aa22.14■■□□□ 1.14
PCM1-218ENST00000523055 FAM83GA6ND36 823 aa22.14■■□□□ 1.13
PCM1-218ENST00000523055 BAG6P46379 1132 aa22.14■■□□□ 1.13
PCM1-218ENST00000523055 RGPD8O14715 1765 aaPredicted RBP22.13■■□□□ 1.13
PCM1-218ENST00000523055 CCDC9Q9Y3X0 531 aaKnown RBP22.12■■□□□ 1.13
PCM1-218ENST00000523055 NRXN1Q9ULB1 1477 aa22.11■■□□□ 1.13
PCM1-218ENST00000523055 SBNO1A3KN83 1393 aa22.11■■□□□ 1.13
PCM1-218ENST00000523055 EN1Q05925 392 aaPredicted RBP22.11■■□□□ 1.13
PCM1-218ENST00000523055 PHF8Q9UPP1 1060 aa22.11■■□□□ 1.13
PCM1-218ENST00000523055 NRAPQ86VF7 1730 aa22.1■■□□□ 1.13
PCM1-218ENST00000523055 PLEKHG5O94827 1062 aa22.09■■□□□ 1.13
PCM1-218ENST00000523055 HAP1P54257 671 aaPredicted RBP22.09■■□□□ 1.13
PCM1-218ENST00000523055 FAM98CQ17RN3 349 aaKnown RBP22.09■■□□□ 1.13
PCM1-218ENST00000523055 YTHDC2Q9H6S0 1430 aaKnown RBP22.09■■□□□ 1.13
PCM1-218ENST00000523055 PSME1Q06323 249 aa22.07■■□□□ 1.12
PCM1-218ENST00000523055 R3HDM1Q15032 1099 aaKnown RBP22.07■■□□□ 1.12
PCM1-218ENST00000523055 FAM182BQ5T319 152 aa22.07■■□□□ 1.12
PCM1-218ENST00000523055 SIRT1Q96EB6 747 aa22.06■■□□□ 1.12
PCM1-218ENST00000523055 DISP2A7MBM2 1401 aa22.06■■□□□ 1.12
PCM1-218ENST00000523055 ARHGEF10O15013 1369 aa22.05■■□□□ 1.12
PCM1-218ENST00000523055 RGPD1P0DJD0 1748 aa22.04■■□□□ 1.12
PCM1-218ENST00000523055 TNS1Q9HBL0 1735 aaKnown RBP22.03■■□□□ 1.12
PCM1-218ENST00000523055 A0A0G2JS52 829 aa22.03■■□□□ 1.12
PCM1-218ENST00000523055 MYT1Q01538 1121 aa22.03■■□□□ 1.12
PCM1-218ENST00000523055 BTG4Q9NY30 223 aa22.03■■□□□ 1.12
PCM1-218ENST00000523055 CFAP70Q5T0N1 1121 aa22.02■■□□□ 1.12
PCM1-218ENST00000523055 LMOD2Q6P5Q4 547 aa22.02■■□□□ 1.12
PCM1-218ENST00000523055 DHX57Q6P158 1386 aaKnown RBP22.02■■□□□ 1.12
PCM1-218ENST00000523055 SPATA31A5Q5VU36 1347 aa22.01■■□□□ 1.11
PCM1-218ENST00000523055 SPATA31A7Q8IWB4 1347 aa22.01■■□□□ 1.11
PCM1-218ENST00000523055 THSD7AQ9UPZ6 1657 aa22.01■■□□□ 1.11
PCM1-218ENST00000523055 EZH2Q15910 746 aaKnown RBP22■■□□□ 1.11
PCM1-218ENST00000523055 C14orf93Q9H972 538 aaKnown RBP22■■□□□ 1.11
PCM1-218ENST00000523055 KDM2AQ9Y2K7 1162 aa22■■□□□ 1.11
PCM1-218ENST00000523055 TRPM3Q9HCF6 1732 aaPredicted RBP22■■□□□ 1.11
PCM1-218ENST00000523055 DCAF11Q8TEB1 546 aa21.99■■□□□ 1.11
PCM1-218ENST00000523055 ADGRB1O14514 1584 aa21.99■■□□□ 1.11
PCM1-218ENST00000523055 PMFBP1Q8TBY8 1022 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms