RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 EPAS1Q99814 870 aa10.83□□□□□ -0.68
VPS13B-211ENST00000522802 MED1Q15648 1581 aaPredicted RBP10.82□□□□□ -0.68
VPS13B-211ENST00000522802 ZNF518AQ6AHZ1 1483 aa10.82□□□□□ -0.68
VPS13B-211ENST00000522802 PLEKHD1A6NEE1 506 aa10.82□□□□□ -0.68
VPS13B-211ENST00000522802 CAMSAP1Q5T5Y3 1602 aa10.81□□□□□ -0.68
VPS13B-211ENST00000522802 RBM26Q5T8P6 1007 aaKnown RBP10.81□□□□□ -0.68
VPS13B-211ENST00000522802 PSDA5PKW4 1024 aaPredicted RBP10.8□□□□□ -0.68
VPS13B-211ENST00000522802 RANGAP1P46060 587 aaPredicted RBP10.8□□□□□ -0.68
VPS13B-211ENST00000522802 PRIM1P49642 420 aaKnown RBP10.8□□□□□ -0.68
VPS13B-211ENST00000522802 LSM11P83369 360 aaKnown RBP eCLIP10.79□□□□□ -0.68
VPS13B-211ENST00000522802 TYW1BQ6NUM6 668 aa10.79□□□□□ -0.68
VPS13B-211ENST00000522802 ZNF454Q8N9F8 522 aa10.79□□□□□ -0.68
VPS13B-211ENST00000522802 ZNF142P52746 1687 aaPredicted RBP10.79□□□□□ -0.68
VPS13B-211ENST00000522802 MYO3AQ8NEV4 1616 aa10.78□□□□□ -0.68
VPS13B-211ENST00000522802 FBXW7Q969H0 707 aa10.78□□□□□ -0.68
VPS13B-211ENST00000522802 ZNF335Q9H4Z2 1342 aaPredicted RBP10.78□□□□□ -0.68
VPS13B-211ENST00000522802 ARHGAP5Q13017 1502 aa10.78□□□□□ -0.68
VPS13B-211ENST00000522802 TRAPPC8Q9Y2L5 1435 aa10.77□□□□□ -0.68
VPS13B-211ENST00000522802 MROH2AA6NES4 1674 aa10.77□□□□□ -0.69
VPS13B-211ENST00000522802 ZDHHC16Q969W1 377 aa10.77□□□□□ -0.69
VPS13B-211ENST00000522802 AGLP35573 1532 aa10.77□□□□□ -0.69
VPS13B-211ENST00000522802 ITSN2Q9NZM3 1697 aa10.76□□□□□ -0.69
VPS13B-211ENST00000522802 SUPT6HQ7KZ85 1726 aaKnown RBP10.76□□□□□ -0.69
VPS13B-211ENST00000522802 LRRIQ1Q96JM4 1722 aa10.76□□□□□ -0.69
VPS13B-211ENST00000522802 CDC42BPBQ9Y5S2 1711 aa10.76□□□□□ -0.69
VPS13B-211ENST00000522802 EN1Q05925 392 aaPredicted RBP10.76□□□□□ -0.69
VPS13B-211ENST00000522802 ABCC1P33527 1531 aa10.75□□□□□ -0.69
VPS13B-211ENST00000522802 KIDINS220Q9ULH0 1771 aa10.75□□□□□ -0.69
VPS13B-211ENST00000522802 PREX2Q70Z35 1606 aa10.74□□□□□ -0.69
VPS13B-211ENST00000522802 UBAP1LF5GYI3 381 aa10.74□□□□□ -0.69
VPS13B-211ENST00000522802 PPP4R3BQ5MIZ7 849 aa10.74□□□□□ -0.69
VPS13B-211ENST00000522802 AFAP1Q8N556 730 aa10.74□□□□□ -0.69
VPS13B-211ENST00000522802 MLH3Q9UHC1 1453 aa10.74□□□□□ -0.69
VPS13B-211ENST00000522802 RBM33Q96EV2 1170 aaKnown RBP10.73□□□□□ -0.69
VPS13B-211ENST00000522802 ADAM33Q9BZ11 813 aa10.73□□□□□ -0.69
VPS13B-211ENST00000522802 CEP170BQ9Y4F5 1589 aaPredicted RBP10.73□□□□□ -0.69
VPS13B-211ENST00000522802 CLTCQ00610 1675 aaKnown RBP10.73□□□□□ -0.69
VPS13B-211ENST00000522802 EFCAB2Q5VUJ9 269 aa10.72□□□□□ -0.69
VPS13B-211ENST00000522802 POTEEQ6S8J3 1075 aa10.72□□□□□ -0.69
VPS13B-211ENST00000522802 NPATQ14207 1427 aa10.72□□□□□ -0.69
VPS13B-211ENST00000522802 CNTLNQ9NXG0 1405 aa10.72□□□□□ -0.69
VPS13B-211ENST00000522802 TCOF1Q13428 1488 aaKnown RBP10.72□□□□□ -0.69
VPS13B-211ENST00000522802 MAP3K7O43318 606 aa10.71□□□□□ -0.69
VPS13B-211ENST00000522802 PLA2R1Q13018 1463 aa10.71□□□□□ -0.69
VPS13B-211ENST00000522802 C6orf132Q5T0Z8 1188 aa10.71□□□□□ -0.69
VPS13B-211ENST00000522802 ZC3H15Q8WU90 426 aaKnown RBP10.71□□□□□ -0.69
VPS13B-211ENST00000522802 BCL2L12Q9HB09 334 aa10.71□□□□□ -0.69
VPS13B-211ENST00000522802 AXIN2Q9Y2T1 843 aa10.71□□□□□ -0.69
VPS13B-211ENST00000522802 NUTM2FA1L443 756 aa10.7□□□□□ -0.7
VPS13B-211ENST00000522802 TPRNQ4KMQ1 711 aa10.7□□□□□ -0.7
VPS13B-211ENST00000522802 GPIHBP1Q8IV16 184 aa10.7□□□□□ -0.7
VPS13B-211ENST00000522802 TROQ12816 1431 aaPredicted RBP10.69□□□□□ -0.7
VPS13B-211ENST00000522802 GPR37O15354 613 aa10.69□□□□□ -0.7
VPS13B-211ENST00000522802 HSPA1LP34931 641 aa10.69□□□□□ -0.7
VPS13B-211ENST00000522802 PBX2P40425 430 aa10.69□□□□□ -0.7
VPS13B-211ENST00000522802 TSR1Q2NL82 804 aaKnown RBP10.69□□□□□ -0.7
VPS13B-211ENST00000522802 NPDC1Q9NQX5 325 aaPredicted RBP10.69□□□□□ -0.7
VPS13B-211ENST00000522802 POLR1AO95602 1720 aaPredicted RBP10.69□□□□□ -0.7
VPS13B-211ENST00000522802 ALKQ9UM73 1620 aa10.69□□□□□ -0.7
VPS13B-211ENST00000522802 NEURL4Q96JN8 1562 aa10.68□□□□□ -0.7
VPS13B-211ENST00000522802 CDC42BPAQ5VT25 1732 aa10.67□□□□□ -0.7
VPS13B-211ENST00000522802 PTGDRQ13258 359 aa10.67□□□□□ -0.7
VPS13B-211ENST00000522802 CDHR5Q9HBB8 845 aa10.67□□□□□ -0.7
VPS13B-211ENST00000522802 PLXNC1O60486 1568 aa10.67□□□□□ -0.7
VPS13B-211ENST00000522802 SAMD9LQ8IVG5 1584 aa10.67□□□□□ -0.7
VPS13B-211ENST00000522802 ZMYND10O75800 440 aa10.66□□□□□ -0.7
VPS13B-211ENST00000522802 PRKCSHP14314 528 aaPredicted RBP10.66□□□□□ -0.7
VPS13B-211ENST00000522802 ESF1Q9H501 851 aaKnown RBP10.66□□□□□ -0.7
VPS13B-211ENST00000522802 CLIP1P30622 1438 aa10.66□□□□□ -0.7
VPS13B-211ENST00000522802 FCHSD2O94868 740 aa10.65□□□□□ -0.7
VPS13B-211ENST00000522802 PIP4K2BP78356 416 aa10.65□□□□□ -0.7
VPS13B-211ENST00000522802 DNMT1P26358 1616 aaKnown RBP10.65□□□□□ -0.7
VPS13B-211ENST00000522802 INO80Q9ULG1 1556 aaPredicted RBP10.65□□□□□ -0.71
VPS13B-211ENST00000522802 SYCP2Q9BX26 1530 aa10.64□□□□□ -0.71
VPS13B-211ENST00000522802 ARHGAP35Q9NRY4 1499 aa10.64□□□□□ -0.71
VPS13B-211ENST00000522802 PTPREP23469 700 aa10.64□□□□□ -0.71
VPS13B-211ENST00000522802 PTPRKQ15262 1439 aa10.64□□□□□ -0.71
VPS13B-211ENST00000522802 FMN1Q68DA7 1419 aa10.64□□□□□ -0.71
VPS13B-211ENST00000522802 ZMYM3Q14202 1370 aa10.64□□□□□ -0.71
VPS13B-211ENST00000522802 CPS1P31327 1500 aa10.63□□□□□ -0.71
VPS13B-211ENST00000522802 ATP1B4Q9UN42 357 aaPredicted RBP10.63□□□□□ -0.71
VPS13B-211ENST00000522802 ATP7AQ04656 1500 aa10.63□□□□□ -0.71
VPS13B-211ENST00000522802 VWDEQ8N2E2 1590 aa10.62□□□□□ -0.71
VPS13B-211ENST00000522802 EEA1Q15075 1411 aa10.62□□□□□ -0.71
VPS13B-211ENST00000522802 COL9A1P20849 921 aa10.62□□□□□ -0.71
VPS13B-211ENST00000522802 HIC1Q14526 733 aa10.62□□□□□ -0.71
VPS13B-211ENST00000522802 BARGINQ6ZT62 677 aa10.62□□□□□ -0.71
VPS13B-211ENST00000522802 ARHGAP33O14559 1287 aa10.61□□□□□ -0.71
VPS13B-211ENST00000522802 PPP1R3GB7ZBB8 358 aa10.6□□□□□ -0.71
VPS13B-211ENST00000522802 GNPATO15228 680 aa10.6□□□□□ -0.71
VPS13B-211ENST00000522802 KCNK17Q96T54 332 aa10.6□□□□□ -0.71
VPS13B-211ENST00000522802 PLA2G2EQ9NZK7 142 aa10.6□□□□□ -0.71
VPS13B-211ENST00000522802 A2ML1A8K2U0 1454 aa10.6□□□□□ -0.71
VPS13B-211ENST00000522802 SHANK2Q9UPX8 1470 aa10.6□□□□□ -0.71
VPS13B-211ENST00000522802 STRCP1A6NGW2 1772 aa10.6□□□□□ -0.71
VPS13B-211ENST00000522802 PSEN2P49810 448 aa10.59□□□□□ -0.71
VPS13B-211ENST00000522802 RNF17Q9BXT8 1623 aaKnown RBP10.58□□□□□ -0.72
VPS13B-211ENST00000522802 FECHP22830 423 aa10.58□□□□□ -0.72
VPS13B-211ENST00000522802 ADGRD1Q6QNK2 874 aa10.58□□□□□ -0.72
VPS13B-211ENST00000522802 CDK11AQ9UQ88 783 aaPredicted RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms