RNA–Protein interactions for RNA: ENST00000522719.2

NKX2-1-204, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 1,417 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-204ENST00000522719 SIPA1L2Q9P2F8 1722 aaPredicted RBP35.94■■■■□ 3.34
NKX2-1-204ENST00000522719 NCOA3Q9Y6Q9 1424 aa35.91■■■■□ 3.34
NKX2-1-204ENST00000522719 ADGRB2O60241 1585 aa35.9■■■■□ 3.34
NKX2-1-204ENST00000522719 TMF1P82094 1093 aa35.89■■■■□ 3.34
NKX2-1-204ENST00000522719 MINK1Q8N4C8 1332 aaPredicted RBP35.89■■■■□ 3.34
NKX2-1-204ENST00000522719 NALCNQ8IZF0 1738 aa35.86■■■■□ 3.33
NKX2-1-204ENST00000522719 LRRC7Q96NW7 1537 aa35.86■■■■□ 3.33
NKX2-1-204ENST00000522719 XIRP1Q702N8 1843 aaKnown RBP35.86■■■■□ 3.33
NKX2-1-204ENST00000522719 ZNF316A6NFI3 1004 aaPredicted RBP35.85■■■■□ 3.33
NKX2-1-204ENST00000522719 LTBP4Q8N2S1 1624 aa35.85■■■■□ 3.33
NKX2-1-204ENST00000522719 EVC2Q86UK5 1308 aa35.84■■■■□ 3.33
NKX2-1-204ENST00000522719 TMEM94Q12767 1356 aa35.84■■■■□ 3.33
NKX2-1-204ENST00000522719 ADGRL3Q9HAR2 1447 aa35.84■■■■□ 3.33
NKX2-1-204ENST00000522719 TULP4Q9NRJ4 1543 aa35.82■■■■□ 3.33
NKX2-1-204ENST00000522719 CDCA8Q53HL2 280 aa35.82■■■■□ 3.32
NKX2-1-204ENST00000522719 DISP3Q9P2K9 1392 aa35.81■■■■□ 3.32
NKX2-1-204ENST00000522719 C14orf37Q86TY3 774 aa35.79■■■■□ 3.32
NKX2-1-204ENST00000522719 RBM33Q96EV2 1170 aaKnown RBP35.79■■■■□ 3.32
NKX2-1-204ENST00000522719 CDC42BPGQ6DT37 1551 aa35.78■■■■□ 3.32
NKX2-1-204ENST00000522719 PUS7Q96PZ0 661 aaKnown RBP35.78■■■■□ 3.32
NKX2-1-204ENST00000522719 WASLO00401 505 aaPredicted RBP35.77■■■■□ 3.32
NKX2-1-204ENST00000522719 C11orf95C9JLR9 678 aaPredicted RBP35.76■■■■□ 3.32
NKX2-1-204ENST00000522719 C19orf44Q9H6X5 657 aa35.76■■■■□ 3.32
NKX2-1-204ENST00000522719 CDK19Q9BWU1 502 aa35.74■■■■□ 3.31
NKX2-1-204ENST00000522719 KIF7Q2M1P5 1343 aa35.72■■■■□ 3.31
NKX2-1-204ENST00000522719 DCCP43146 1447 aa35.72■■■■□ 3.31
NKX2-1-204ENST00000522719 FMN2Q9NZ56 1722 aa35.71■■■■□ 3.31
NKX2-1-204ENST00000522719 MSH6P52701 1360 aa35.71■■■■□ 3.31
NKX2-1-204ENST00000522719 CCDC7Q96M83 1385 aa35.71■■■■□ 3.31
NKX2-1-204ENST00000522719 SRPK2P78362 688 aaKnown RBP35.7■■■■□ 3.31
NKX2-1-204ENST00000522719 WASHC2AQ641Q2 1341 aa35.7■■■■□ 3.3
NKX2-1-204ENST00000522719 CABP2Q9NPB3 220 aa35.66■■■■□ 3.3
NKX2-1-204ENST00000522719 ATAD2Q6PL18 1390 aa35.66■■■■□ 3.3
NKX2-1-204ENST00000522719 ANKARQ7Z5J8 1434 aa35.63■■■■□ 3.29
NKX2-1-204ENST00000522719 ATF3P18847 181 aa35.63■■■■□ 3.29
NKX2-1-204ENST00000522719 CADPS2Q86UW7 1296 aa35.62■■■■□ 3.29
NKX2-1-204ENST00000522719 POLR3GLQ9BT43 218 aa35.61■■■■□ 3.29
NKX2-1-204ENST00000522719 ITSN1Q15811 1721 aa35.61■■■■□ 3.29
NKX2-1-204ENST00000522719 ATP7BP35670 1465 aa35.6■■■■□ 3.29
NKX2-1-204ENST00000522719 USP32Q8NFA0 1604 aa35.6■■■■□ 3.29
NKX2-1-204ENST00000522719 RGPD8O14715 1765 aaPredicted RBP35.6■■■■□ 3.29
NKX2-1-204ENST00000522719 NUDT16Q96DE0 195 aaKnown RBP35.59■■■■□ 3.29
NKX2-1-204ENST00000522719 MYOM1P52179 1685 aa35.58■■■■□ 3.29
NKX2-1-204ENST00000522719 NINLQ9Y2I6 1382 aa35.58■■■■□ 3.29
NKX2-1-204ENST00000522719 TOPAZ1Q8N9V7 1692 aa35.57■■■■□ 3.29
NKX2-1-204ENST00000522719 PRR36Q9H6K5 1346 aa35.56■■■■□ 3.28
NKX2-1-204ENST00000522719 CCDC61Q9Y6R9 512 aa35.56■■■■□ 3.28
NKX2-1-204ENST00000522719 IQSEC2Q5JU85 1478 aa35.55■■■■□ 3.28
NKX2-1-204ENST00000522719 NUTM2FA1L443 756 aa35.52■■■■□ 3.28
NKX2-1-204ENST00000522719 MST1RQ04912 1400 aa35.52■■■■□ 3.28
NKX2-1-204ENST00000522719 PPIP5K1Q6PFW1 1433 aa35.5■■■■□ 3.27
NKX2-1-204ENST00000522719 C1orf167Q5SNV9 1468 aa35.49■■■■□ 3.27
NKX2-1-204ENST00000522719 TMC1Q8TDI8 760 aa35.49■■■■□ 3.27
NKX2-1-204ENST00000522719 CABP1Q9NZU7 370 aa35.47■■■■□ 3.27
NKX2-1-204ENST00000522719 SLC12A5Q9H2X9 1139 aa35.46■■■■□ 3.27
NKX2-1-204ENST00000522719 PLEKHG3A1L390 1219 aa35.45■■■■□ 3.27
NKX2-1-204ENST00000522719 CERKQ8TCT0 537 aa35.44■■■■□ 3.26
NKX2-1-204ENST00000522719 SLAIN2Q9P270 581 aa35.43■■■■□ 3.26
NKX2-1-204ENST00000522719 KIF1AQ12756 1690 aa35.42■■■■□ 3.26
NKX2-1-204ENST00000522719 DDX10Q13206 875 aaKnown RBP35.41■■■■□ 3.26
NKX2-1-204ENST00000522719 ESCO1Q5FWF5 840 aa35.4■■■■□ 3.26
NKX2-1-204ENST00000522719 TERF2IPQ9NYB0 399 aa35.4■■■■□ 3.26
NKX2-1-204ENST00000522719 ANKRD36BQ8N2N9 1353 aa35.4■■■■□ 3.26
NKX2-1-204ENST00000522719 AKAP12Q02952 1782 aa35.4■■■■□ 3.26
NKX2-1-204ENST00000522719 PHF8Q9UPP1 1060 aa35.39■■■■□ 3.26
NKX2-1-204ENST00000522719 CD163L1Q9NR16 1453 aa35.38■■■■□ 3.25
NKX2-1-204ENST00000522719 PANK3Q9H999 370 aa35.37■■■■□ 3.25
NKX2-1-204ENST00000522719 POLR3AO14802 1390 aaPredicted RBP35.37■■■■□ 3.25
NKX2-1-204ENST00000522719 CPSF1Q10570 1443 aaKnown RBP35.36■■■■□ 3.25
NKX2-1-204ENST00000522719 HDGFL2Q7Z4V5 671 aaPredicted RBP35.36■■■■□ 3.25
NKX2-1-204ENST00000522719 ORAI2Q96SN7 254 aa35.36■■■■□ 3.25
NKX2-1-204ENST00000522719 ACEP12821 1306 aa35.34■■■■□ 3.25
NKX2-1-204ENST00000522719 TOM1O60784 492 aa35.34■■■■□ 3.25
NKX2-1-204ENST00000522719 PMFBP1Q8TBY8 1022 aa35.34■■■■□ 3.25
NKX2-1-204ENST00000522719 ZNF692Q9BU19 519 aaPredicted RBP35.34■■■■□ 3.25
NKX2-1-204ENST00000522719 A0A1W2PP64 1363 aa35.34■■■■□ 3.25
NKX2-1-204ENST00000522719 MON2Q7Z3U7 1717 aa35.33■■■■□ 3.25
NKX2-1-204ENST00000522719 NGDNQ8NEJ9 315 aaKnown RBP35.32■■■■□ 3.25
NKX2-1-204ENST00000522719 BRINP3Q76B58 766 aa35.28■■■■□ 3.24
NKX2-1-204ENST00000522719 KTN1Q86UP2 1357 aaKnown RBP35.28■■■■□ 3.24
NKX2-1-204ENST00000522719 PER1O15534 1290 aaPredicted RBP35.24■■■■□ 3.23
NKX2-1-204ENST00000522719 CARD14Q9BXL6 1004 aa35.24■■■■□ 3.23
NKX2-1-204ENST00000522719 USP6P35125 1406 aa35.24■■■■□ 3.23
NKX2-1-204ENST00000522719 ROBO1Q9Y6N7 1651 aa35.24■■■■□ 3.23
NKX2-1-204ENST00000522719 BRD4O60885 1362 aaPredicted RBP35.24■■■■□ 3.23
NKX2-1-204ENST00000522719 UBAP1LF5GYI3 381 aa35.23■■■■□ 3.23
NKX2-1-204ENST00000522719 EDC4Q6P2E9 1401 aaKnown RBP35.23■■■■□ 3.23
NKX2-1-204ENST00000522719 FOXO3O43524 673 aa35.22■■■■□ 3.23
NKX2-1-204ENST00000522719 KNSTRNQ9Y448 316 aa35.22■■■■□ 3.23
NKX2-1-204ENST00000522719 NSD3Q9BZ95 1437 aa35.22■■■■□ 3.23
NKX2-1-204ENST00000522719 NRKQ7Z2Y5 1582 aa35.22■■■■□ 3.23
NKX2-1-204ENST00000522719 NPHP3Q7Z494 1330 aa35.21■■■■□ 3.23
NKX2-1-204ENST00000522719 PSME1Q06323 249 aa35.21■■■■□ 3.23
NKX2-1-204ENST00000522719 NHSL1Q5SYE7 1610 aa35.19■■■■□ 3.22
NKX2-1-204ENST00000522719 SSH2Q76I76 1423 aa35.18■■■■□ 3.22
NKX2-1-204ENST00000522719 CGNL1Q0VF96 1302 aa35.14■■■■□ 3.22
NKX2-1-204ENST00000522719 KRT28Q7Z3Y7 464 aa35.14■■■■□ 3.22
NKX2-1-204ENST00000522719 TRPM3Q9HCF6 1732 aaPredicted RBP35.14■■■■□ 3.22
NKX2-1-204ENST00000522719 KIF20BQ96Q89 1820 aa35.13■■■■□ 3.21
NKX2-1-204ENST00000522719 TTC21BQ7Z4L5 1316 aa35.13■■■■□ 3.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms