RNA–Protein interactions for RNA: ENST00000522610.5

POLB-213, Transcript of DNA polymerase beta, humanhuman

TSL 5

Gene POLB, Length 1,341 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-213ENST00000522610 PLEKHH1Q9ULM0 1364 aa17.5■□□□□ 0.39
POLB-213ENST00000522610 DCCP43146 1447 aa17.5■□□□□ 0.39
POLB-213ENST00000522610 C19orf44Q9H6X5 657 aa17.49■□□□□ 0.39
POLB-213ENST00000522610 WAPLQ7Z5K2 1190 aa17.48■□□□□ 0.39
POLB-213ENST00000522610 KIAA1210Q9ULL0 1709 aa17.48■□□□□ 0.39
POLB-213ENST00000522610 ATF3P18847 181 aa17.47■□□□□ 0.39
POLB-213ENST00000522610 DLC1Q96QB1 1528 aa17.47■□□□□ 0.39
POLB-213ENST00000522610 FAM135BQ49AJ0 1406 aa17.47■□□□□ 0.39
POLB-213ENST00000522610 CADPS2Q86UW7 1296 aa17.47■□□□□ 0.39
POLB-213ENST00000522610 ROBO1Q9Y6N7 1651 aa17.46■□□□□ 0.39
POLB-213ENST00000522610 SLAIN2Q9P270 581 aa17.46■□□□□ 0.38
POLB-213ENST00000522610 MST1RQ04912 1400 aa17.45■□□□□ 0.38
POLB-213ENST00000522610 CDC42BPGQ6DT37 1551 aa17.45■□□□□ 0.38
POLB-213ENST00000522610 PRAM1Q96QH2 718 aa17.45■□□□□ 0.38
POLB-213ENST00000522610 TRAK1Q9UPV9 953 aa17.45■□□□□ 0.38
POLB-213ENST00000522610 NBPF1Q3BBV0 1214 aa17.44■□□□□ 0.38
POLB-213ENST00000522610 TRPM1Q7Z4N2 1603 aa17.43■□□□□ 0.38
POLB-213ENST00000522610 HSPA1LP34931 641 aa17.43■□□□□ 0.38
POLB-213ENST00000522610 CCER1Q8TC90 406 aaPredicted RBP17.43■□□□□ 0.38
POLB-213ENST00000522610 SIRT1Q96EB6 747 aa17.43■□□□□ 0.38
POLB-213ENST00000522610 ARHGEF28Q8N1W1 1705 aaKnown RBP17.42■□□□□ 0.38
POLB-213ENST00000522610 CLSPNQ9HAW4 1339 aa17.42■□□□□ 0.38
POLB-213ENST00000522610 SAFB2Q14151 953 aaKnown RBP eCLIP17.42■□□□□ 0.38
POLB-213ENST00000522610 NBPF8Q3BBV2 869 aa17.42■□□□□ 0.38
POLB-213ENST00000522610 NPM3O75607 178 aaKnown RBP17.41■□□□□ 0.38
POLB-213ENST00000522610 POGKQ9P215 609 aa17.4■□□□□ 0.38
POLB-213ENST00000522610 C1orf167Q5SNV9 1468 aa17.38■□□□□ 0.37
POLB-213ENST00000522610 ROCK2O75116 1388 aaKnown RBP17.38■□□□□ 0.37
POLB-213ENST00000522610 ADGRB2O60241 1585 aa17.38■□□□□ 0.37
POLB-213ENST00000522610 BRINP3Q76B58 766 aa17.37■□□□□ 0.37
POLB-213ENST00000522610 RALGAPBQ86X10 1494 aa17.37■□□□□ 0.37
POLB-213ENST00000522610 FMN2Q9NZ56 1722 aa17.36■□□□□ 0.37
POLB-213ENST00000522610 MINK1Q8N4C8 1332 aaPredicted RBP17.35■□□□□ 0.37
POLB-213ENST00000522610 HIRIP3Q9BW71 556 aaPredicted RBP17.35■□□□□ 0.37
POLB-213ENST00000522610 GPRASP1Q5JY77 1395 aa17.35■□□□□ 0.37
POLB-213ENST00000522610 AHDC1Q5TGY3 1603 aaPredicted RBP17.34■□□□□ 0.37
POLB-213ENST00000522610 NUTM2FA1L443 756 aa17.34■□□□□ 0.37
POLB-213ENST00000522610 PHLPP1O60346 1717 aa17.33■□□□□ 0.36
POLB-213ENST00000522610 ORAI2Q96SN7 254 aa17.32■□□□□ 0.36
POLB-213ENST00000522610 COL16A1Q07092 1604 aaPredicted RBP17.32■□□□□ 0.36
POLB-213ENST00000522610 NHSL1Q5SYE7 1610 aa17.31■□□□□ 0.36
POLB-213ENST00000522610 USP32Q8NFA0 1604 aa17.3■□□□□ 0.36
POLB-213ENST00000522610 CENPJQ9HC77 1338 aaPredicted RBP17.3■□□□□ 0.36
POLB-213ENST00000522610 QRICH2Q9H0J4 1663 aa17.29■□□□□ 0.36
POLB-213ENST00000522610 TIMELESSQ9UNS1 1208 aa17.29■□□□□ 0.36
POLB-213ENST00000522610 ESCO1Q5FWF5 840 aa17.28■□□□□ 0.36
POLB-213ENST00000522610 DDX17Q92841 729 aaKnown RBP17.28■□□□□ 0.36
POLB-213ENST00000522610 CARD11Q9BXL7 1154 aa17.28■□□□□ 0.36
POLB-213ENST00000522610 TULP4Q9NRJ4 1543 aa17.28■□□□□ 0.36
POLB-213ENST00000522610 EIF3AQ14152 1382 aaKnown RBP17.27■□□□□ 0.36
POLB-213ENST00000522610 WASLO00401 505 aaPredicted RBP17.27■□□□□ 0.36
POLB-213ENST00000522610 ANKARQ7Z5J8 1434 aa17.27■□□□□ 0.36
POLB-213ENST00000522610 PRR36Q9H6K5 1346 aa17.26■□□□□ 0.35
POLB-213ENST00000522610 ATP7BP35670 1465 aa17.25■□□□□ 0.35
POLB-213ENST00000522610 KIF1AQ12756 1690 aa17.25■□□□□ 0.35
POLB-213ENST00000522610 RGPD8O14715 1765 aaPredicted RBP17.23■□□□□ 0.35
POLB-213ENST00000522610 JCADQ9P266 1359 aa17.23■□□□□ 0.35
POLB-213ENST00000522610 CDK19Q9BWU1 502 aa17.22■□□□□ 0.35
POLB-213ENST00000522610 PXDNQ92626 1479 aa17.22■□□□□ 0.35
POLB-213ENST00000522610 MED1Q15648 1581 aaPredicted RBP17.22■□□□□ 0.35
POLB-213ENST00000522610 PHF8Q9UPP1 1060 aa17.21■□□□□ 0.35
POLB-213ENST00000522610 NPHP3Q7Z494 1330 aa17.21■□□□□ 0.35
POLB-213ENST00000522610 FOXO3O43524 673 aa17.21■□□□□ 0.34
POLB-213ENST00000522610 XPCQ01831 940 aaPredicted RBP17.21■□□□□ 0.34
POLB-213ENST00000522610 SOS2Q07890 1332 aaPredicted RBP17.2■□□□□ 0.34
POLB-213ENST00000522610 SHPRHQ149N8 1683 aa17.19■□□□□ 0.34
POLB-213ENST00000522610 TOPAZ1Q8N9V7 1692 aa17.19■□□□□ 0.34
POLB-213ENST00000522610 SRPK2P78362 688 aaKnown RBP17.19■□□□□ 0.34
POLB-213ENST00000522610 PMFBP1Q8TBY8 1022 aa17.19■□□□□ 0.34
POLB-213ENST00000522610 NUDT16Q96DE0 195 aaKnown RBP17.19■□□□□ 0.34
POLB-213ENST00000522610 ITSN1Q15811 1721 aa17.18■□□□□ 0.34
POLB-213ENST00000522610 USP47Q96K76 1375 aa17.18■□□□□ 0.34
POLB-213ENST00000522610 CABP2Q9NPB3 220 aa17.18■□□□□ 0.34
POLB-213ENST00000522610 SBNO2Q9Y2G9 1366 aa17.18■□□□□ 0.34
POLB-213ENST00000522610 PNPLA6Q8IY17 1366 aa17.17■□□□□ 0.34
POLB-213ENST00000522610 LRRC59Q96AG4 307 aaKnown RBP17.17■□□□□ 0.34
POLB-213ENST00000522610 EVC2Q86UK5 1308 aa17.16■□□□□ 0.34
POLB-213ENST00000522610 LRP6O75581 1613 aa17.15■□□□□ 0.34
POLB-213ENST00000522610 PPIP5K1Q6PFW1 1433 aa17.14■□□□□ 0.33
POLB-213ENST00000522610 ST20-MTHFSA0A0A6YYL1 179 aa17.14■□□□□ 0.33
POLB-213ENST00000522610 KRT28Q7Z3Y7 464 aa17.14■□□□□ 0.33
POLB-213ENST00000522610 CCDC61Q9Y6R9 512 aa17.14■□□□□ 0.33
POLB-213ENST00000522610 SPATA31A6Q5VVP1 1343 aa17.13■□□□□ 0.33
POLB-213ENST00000522610 NGDNQ8NEJ9 315 aaKnown RBP17.12■□□□□ 0.33
POLB-213ENST00000522610 TESK2Q96S53 571 aa17.12■□□□□ 0.33
POLB-213ENST00000522610 TNS3Q68CZ2 1445 aa17.12■□□□□ 0.33
POLB-213ENST00000522610 DISP3Q9P2K9 1392 aa17.11■□□□□ 0.33
POLB-213ENST00000522610 PSME1Q06323 249 aa17.11■□□□□ 0.33
POLB-213ENST00000522610 COL22A1Q8NFW1 1626 aaPredicted RBP17.11■□□□□ 0.33
POLB-213ENST00000522610 TRPM3Q9HCF6 1732 aaPredicted RBP17.11■□□□□ 0.33
POLB-213ENST00000522610 SPATA31A3Q5VYP0 1347 aa17.1■□□□□ 0.33
POLB-213ENST00000522610 NUTM2BA6NNL0 878 aaPredicted RBP17.1■□□□□ 0.33
POLB-213ENST00000522610 NUTM2EB1AL46 878 aaPredicted RBP17.1■□□□□ 0.33
POLB-213ENST00000522610 NUTM2AQ8IVF1 878 aaPredicted RBP17.1■□□□□ 0.33
POLB-213ENST00000522610 SBNO1A3KN83 1393 aa17.1■□□□□ 0.33
POLB-213ENST00000522610 POLR3AO14802 1390 aaPredicted RBP17.1■□□□□ 0.33
POLB-213ENST00000522610 ACEP12821 1306 aa17.09■□□□□ 0.33
POLB-213ENST00000522610 PLEKHG3A1L390 1219 aa17.09■□□□□ 0.33
POLB-213ENST00000522610 ATAD2Q6PL18 1390 aa17.09■□□□□ 0.33
POLB-213ENST00000522610 CABP1Q9NZU7 370 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms