RNA–Protein interactions for RNA: ENST00000522409.1

ZFHX4-208, Transcript of zinc finger homeobox 4, humanhuman

TSL 3

Gene ZFHX4, Length 623 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFHX4-208ENST00000522409 COG6Q9Y2V7 657 aa12.15□□□□□ -0.46
ZFHX4-208ENST00000522409 PDIA4P13667 645 aaKnown RBP12.14□□□□□ -0.47
ZFHX4-208ENST00000522409 PPP2R2DQ66LE6 453 aa12.14□□□□□ -0.47
ZFHX4-208ENST00000522409 SNRKQ9NRH2 765 aa12.14□□□□□ -0.47
ZFHX4-208ENST00000522409 CUX1P39880 1505 aa12.14□□□□□ -0.47
ZFHX4-208ENST00000522409 ADAMTS12P58397 1594 aa12.13□□□□□ -0.47
ZFHX4-208ENST00000522409 TMEM259Q4ZIN3 620 aa12.12□□□□□ -0.47
ZFHX4-208ENST00000522409 LIMD1Q9UGP4 676 aa12.12□□□□□ -0.47
ZFHX4-208ENST00000522409 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.11□□□□□ -0.47
ZFHX4-208ENST00000522409 NUDT7P0C024 238 aa12.11□□□□□ -0.47
ZFHX4-208ENST00000522409 GPR153Q6NV75 609 aa12.11□□□□□ -0.47
ZFHX4-208ENST00000522409 SPIRE2Q8WWL2 714 aa12.11□□□□□ -0.47
ZFHX4-208ENST00000522409 EYA1Q99502 592 aa12.11□□□□□ -0.47
ZFHX4-208ENST00000522409 FAM198AQ9UFP1 575 aa12.11□□□□□ -0.47
ZFHX4-208ENST00000522409 SERPINA10Q9UK55 444 aa12.11□□□□□ -0.47
ZFHX4-208ENST00000522409 TUSC1Q2TAM9 212 aa12.1□□□□□ -0.47
ZFHX4-208ENST00000522409 VARS2Q5ST30 1063 aaKnown RBP12.1□□□□□ -0.47
ZFHX4-208ENST00000522409 RIC3Q7Z5B4 369 aa12.1□□□□□ -0.47
ZFHX4-208ENST00000522409 KHSRPQ92945 711 aaKnown RBP eCLIP12.1□□□□□ -0.47
ZFHX4-208ENST00000522409 ABCA10Q8WWZ4 1543 aa12.1□□□□□ -0.47
ZFHX4-208ENST00000522409 PPRC1Q5VV67 1664 aaKnown RBP12.1□□□□□ -0.47
ZFHX4-208ENST00000522409 RCCD1A6NED2 376 aa12.09□□□□□ -0.47
ZFHX4-208ENST00000522409 ARSIQ5FYB1 569 aa12.09□□□□□ -0.47
ZFHX4-208ENST00000522409 CD46P15529 392 aa12.08□□□□□ -0.48
ZFHX4-208ENST00000522409 SPATA31D1Q6ZQQ2 1576 aa12.08□□□□□ -0.48
ZFHX4-208ENST00000522409 FHAD1B1AJZ9 1412 aa12.07□□□□□ -0.48
ZFHX4-208ENST00000522409 SPTLC1O15269 473 aa12.07□□□□□ -0.48
ZFHX4-208ENST00000522409 COL17A1Q9UMD9 1497 aaPredicted RBP12.07□□□□□ -0.48
ZFHX4-208ENST00000522409 CCDC97Q96F63 343 aaPredicted RBP12.06□□□□□ -0.48
ZFHX4-208ENST00000522409 COL9A1P20849 921 aa12.05□□□□□ -0.48
ZFHX4-208ENST00000522409 MTMR14Q8NCE2 650 aa12.04□□□□□ -0.48
ZFHX4-208ENST00000522409 ZNF330Q9Y3S2 320 aaPredicted RBP12.04□□□□□ -0.48
ZFHX4-208ENST00000522409 RSBN1LQ6PCB5 846 aaPredicted RBP12.03□□□□□ -0.48
ZFHX4-208ENST00000522409 NECTIN2Q92692 538 aa12.03□□□□□ -0.48
ZFHX4-208ENST00000522409 GLI2P10070 1586 aa12.03□□□□□ -0.48
ZFHX4-208ENST00000522409 C3orf80F5H4A9 247 aa12.02□□□□□ -0.49
ZFHX4-208ENST00000522409 GJA5P36382 358 aa12.02□□□□□ -0.49
ZFHX4-208ENST00000522409 SULF1Q8IWU6 871 aa12.02□□□□□ -0.49
ZFHX4-208ENST00000522409 ZNF687Q8N1G0 1237 aa12.02□□□□□ -0.49
ZFHX4-208ENST00000522409 TSKSQ9UJT2 592 aa12.02□□□□□ -0.49
ZFHX4-208ENST00000522409 TEX14Q8IWB6 1497 aa12.02□□□□□ -0.49
ZFHX4-208ENST00000522409 ZBTB7CA1YPR0 619 aa12□□□□□ -0.49
ZFHX4-208ENST00000522409 MOXD2PA6NHM9 499 aa12□□□□□ -0.49
ZFHX4-208ENST00000522409 NUDT18Q6ZVK8 323 aa12□□□□□ -0.49
ZFHX4-208ENST00000522409 NUTM1Q86Y26 1132 aa12□□□□□ -0.49
ZFHX4-208ENST00000522409 BCL2L12Q9HB09 334 aa12□□□□□ -0.49
ZFHX4-208ENST00000522409 GDPD2Q9HCC8 539 aa12□□□□□ -0.49
ZFHX4-208ENST00000522409 LHX6Q9UPM6 363 aa12□□□□□ -0.49
ZFHX4-208ENST00000522409 PLB1Q6P1J6 1458 aa12□□□□□ -0.49
ZFHX4-208ENST00000522409 LILRB3O75022 631 aa11.99□□□□□ -0.49
ZFHX4-208ENST00000522409 DNAJB2P25686 324 aa11.99□□□□□ -0.49
ZFHX4-208ENST00000522409 TRAIPQ9BWF2 469 aa11.99□□□□□ -0.49
ZFHX4-208ENST00000522409 ASXL2Q76L83 1435 aa11.99□□□□□ -0.49
ZFHX4-208ENST00000522409 RUSC2Q8N2Y8 1516 aa11.98□□□□□ -0.49
ZFHX4-208ENST00000522409 DDX11L8A8MPP1 907 aa11.98□□□□□ -0.49
ZFHX4-208ENST00000522409 QPCTQ16769 361 aa11.98□□□□□ -0.49
ZFHX4-208ENST00000522409 PCF11O94913 1555 aaKnown RBP11.97□□□□□ -0.49
ZFHX4-208ENST00000522409 TMEM134Q9H6X4 195 aa11.97□□□□□ -0.49
ZFHX4-208ENST00000522409 PCDHB15Q9Y5E8 787 aa11.97□□□□□ -0.49
ZFHX4-208ENST00000522409 PPP1R3GB7ZBB8 358 aa11.96□□□□□ -0.49
ZFHX4-208ENST00000522409 NDUFV2P19404 249 aa11.96□□□□□ -0.49
ZFHX4-208ENST00000522409 CSPP1Q1MSJ5 1256 aa11.96□□□□□ -0.49
ZFHX4-208ENST00000522409 PPP4R3BQ5MIZ7 849 aa11.96□□□□□ -0.49
ZFHX4-208ENST00000522409 TATDN2Q93075 761 aa11.96□□□□□ -0.49
ZFHX4-208ENST00000522409 PTPRMP28827 1452 aa11.95□□□□□ -0.5
ZFHX4-208ENST00000522409 PSDA5PKW4 1024 aaPredicted RBP11.95□□□□□ -0.5
ZFHX4-208ENST00000522409 RTL5Q5HYW3 569 aaPredicted RBP11.95□□□□□ -0.5
ZFHX4-208ENST00000522409 KIF21BO75037 1637 aa11.95□□□□□ -0.5
ZFHX4-208ENST00000522409 MAP3K4Q9Y6R4 1608 aa11.95□□□□□ -0.5
ZFHX4-208ENST00000522409 TTBK1Q5TCY1 1321 aaPredicted RBP11.94□□□□□ -0.5
ZFHX4-208ENST00000522409 PTPREP23469 700 aa11.94□□□□□ -0.5
ZFHX4-208ENST00000522409 ERICH3Q5RHP9 1530 aa11.94□□□□□ -0.5
ZFHX4-208ENST00000522409 ABCC2Q92887 1545 aa11.94□□□□□ -0.5
ZFHX4-208ENST00000522409 TRIM6-TRIM34B2RNG4 842 aa11.93□□□□□ -0.5
ZFHX4-208ENST00000522409 NBPF26B4DH59 902 aa11.93□□□□□ -0.5
ZFHX4-208ENST00000522409 PNMA3Q9UL41 463 aa11.93□□□□□ -0.5
ZFHX4-208ENST00000522409 AP1G2O75843 785 aa11.92□□□□□ -0.5
ZFHX4-208ENST00000522409 PACS2Q86VP3 889 aa11.92□□□□□ -0.5
ZFHX4-208ENST00000522409 WWC1Q8IX03 1113 aa11.92□□□□□ -0.5
ZFHX4-208ENST00000522409 PRM3Q9NNZ6 103 aa11.92□□□□□ -0.5
ZFHX4-208ENST00000522409 WRNQ14191 1432 aaPredicted RBP eCLIP11.92□□□□□ -0.5
ZFHX4-208ENST00000522409 CUL7Q14999 1698 aa11.91□□□□□ -0.5
ZFHX4-208ENST00000522409 PRPF38BQ5VTL8 546 aaKnown RBP11.91□□□□□ -0.5
ZFHX4-208ENST00000522409 PTPRGP23470 1445 aa11.91□□□□□ -0.5
ZFHX4-208ENST00000522409 ABL2P42684 1182 aa11.9□□□□□ -0.5
ZFHX4-208ENST00000522409 TBC1D2BQ9UPU7 963 aa11.9□□□□□ -0.5
ZFHX4-208ENST00000522409 EPRSP07814 1512 aaKnown RBP11.9□□□□□ -0.5
ZFHX4-208ENST00000522409 KDM4AO75164 1064 aa11.89□□□□□ -0.51
ZFHX4-208ENST00000522409 RNF166Q96A37 237 aaPredicted RBP11.89□□□□□ -0.51
ZFHX4-208ENST00000522409 KIAA0586Q9BVV6 1533 aa11.88□□□□□ -0.51
ZFHX4-208ENST00000522409 NUTM2BA6NNL0 878 aaPredicted RBP11.88□□□□□ -0.51
ZFHX4-208ENST00000522409 POM121CA8CG34 1229 aa11.88□□□□□ -0.51
ZFHX4-208ENST00000522409 NUTM2EB1AL46 878 aaPredicted RBP11.88□□□□□ -0.51
ZFHX4-208ENST00000522409 RANGAP1P46060 587 aaPredicted RBP11.88□□□□□ -0.51
ZFHX4-208ENST00000522409 NUTM2DQ5VT03 806 aaPredicted RBP11.88□□□□□ -0.51
ZFHX4-208ENST00000522409 NUTM2AQ8IVF1 878 aaPredicted RBP11.88□□□□□ -0.51
ZFHX4-208ENST00000522409 KCTD17Q8N5Z5 321 aa11.88□□□□□ -0.51
ZFHX4-208ENST00000522409 CABLES1Q8TDN4 633 aa11.88□□□□□ -0.51
ZFHX4-208ENST00000522409 CALR3Q96L12 384 aaKnown RBP11.88□□□□□ -0.51
ZFHX4-208ENST00000522409 USP17L8P0C7I0 530 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms