RNA–Protein interactions for RNA: ENST00000521690.1

LAMA4-216, Transcript of laminin subunit alpha 4, humanhuman

TSL 4

Gene LAMA4, Length 539 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-216ENST00000521690 ZNF335Q9H4Z2 1342 aaPredicted RBP22.91■■□□□ 1.26
LAMA4-216ENST00000521690 SAFB2Q14151 953 aaKnown RBP eCLIP22.9■■□□□ 1.26
LAMA4-216ENST00000521690 PROSER2Q86WR7 435 aaPredicted RBP22.9■■□□□ 1.26
LAMA4-216ENST00000521690 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.9■■□□□ 1.26
LAMA4-216ENST00000521690 EVC2Q86UK5 1308 aa22.89■■□□□ 1.26
LAMA4-216ENST00000521690 CDCA8Q53HL2 280 aa22.89■■□□□ 1.25
LAMA4-216ENST00000521690 MINK1Q8N4C8 1332 aaPredicted RBP22.87■■□□□ 1.25
LAMA4-216ENST00000521690 PUS7Q96PZ0 661 aaKnown RBP22.87■■□□□ 1.25
LAMA4-216ENST00000521690 TULP4Q9NRJ4 1543 aa22.87■■□□□ 1.25
LAMA4-216ENST00000521690 ADGRL3Q9HAR2 1447 aa22.86■■□□□ 1.25
LAMA4-216ENST00000521690 DISP3Q9P2K9 1392 aa22.86■■□□□ 1.25
LAMA4-216ENST00000521690 NALCNQ8IZF0 1738 aa22.85■■□□□ 1.25
LAMA4-216ENST00000521690 LRRC7Q96NW7 1537 aa22.85■■□□□ 1.25
LAMA4-216ENST00000521690 TMEM94Q12767 1356 aa22.85■■□□□ 1.25
LAMA4-216ENST00000521690 CDC42BPGQ6DT37 1551 aa22.84■■□□□ 1.25
LAMA4-216ENST00000521690 LTBP4Q8N2S1 1624 aa22.83■■□□□ 1.25
LAMA4-216ENST00000521690 WASLO00401 505 aaPredicted RBP22.83■■□□□ 1.25
LAMA4-216ENST00000521690 CCDC7Q96M83 1385 aa22.82■■□□□ 1.24
LAMA4-216ENST00000521690 C11orf95C9JLR9 678 aaPredicted RBP22.82■■□□□ 1.24
LAMA4-216ENST00000521690 KIF7Q2M1P5 1343 aa22.82■■□□□ 1.24
LAMA4-216ENST00000521690 WASHC2AQ641Q2 1341 aa22.82■■□□□ 1.24
LAMA4-216ENST00000521690 C14orf37Q86TY3 774 aa22.8■■□□□ 1.24
LAMA4-216ENST00000521690 CDK19Q9BWU1 502 aa22.8■■□□□ 1.24
LAMA4-216ENST00000521690 C19orf44Q9H6X5 657 aa22.8■■□□□ 1.24
LAMA4-216ENST00000521690 DCCP43146 1447 aa22.8■■□□□ 1.24
LAMA4-216ENST00000521690 XIRP1Q702N8 1843 aaKnown RBP22.8■■□□□ 1.24
LAMA4-216ENST00000521690 ATAD2Q6PL18 1390 aa22.78■■□□□ 1.24
LAMA4-216ENST00000521690 SRPK2P78362 688 aaKnown RBP22.78■■□□□ 1.24
LAMA4-216ENST00000521690 FMN2Q9NZ56 1722 aa22.77■■□□□ 1.24
LAMA4-216ENST00000521690 RBM33Q96EV2 1170 aaKnown RBP22.77■■□□□ 1.24
LAMA4-216ENST00000521690 MSH6P52701 1360 aa22.76■■□□□ 1.23
LAMA4-216ENST00000521690 ANKARQ7Z5J8 1434 aa22.75■■□□□ 1.23
LAMA4-216ENST00000521690 NINLQ9Y2I6 1382 aa22.75■■□□□ 1.23
LAMA4-216ENST00000521690 CABP2Q9NPB3 220 aa22.74■■□□□ 1.23
LAMA4-216ENST00000521690 ATP7BP35670 1465 aa22.72■■□□□ 1.23
LAMA4-216ENST00000521690 ATF3P18847 181 aa22.71■■□□□ 1.23
LAMA4-216ENST00000521690 CADPS2Q86UW7 1296 aa22.71■■□□□ 1.23
LAMA4-216ENST00000521690 USP32Q8NFA0 1604 aa22.71■■□□□ 1.23
LAMA4-216ENST00000521690 MYOM1P52179 1685 aa22.71■■□□□ 1.23
LAMA4-216ENST00000521690 ITSN1Q15811 1721 aa22.71■■□□□ 1.23
LAMA4-216ENST00000521690 NUDT16Q96DE0 195 aaKnown RBP22.7■■□□□ 1.22
LAMA4-216ENST00000521690 POLR3GLQ9BT43 218 aa22.7■■□□□ 1.22
LAMA4-216ENST00000521690 CCDC61Q9Y6R9 512 aa22.7■■□□□ 1.22
LAMA4-216ENST00000521690 TOPAZ1Q8N9V7 1692 aa22.7■■□□□ 1.22
LAMA4-216ENST00000521690 IQSEC2Q5JU85 1478 aa22.67■■□□□ 1.22
LAMA4-216ENST00000521690 PRR36Q9H6K5 1346 aa22.67■■□□□ 1.22
LAMA4-216ENST00000521690 MST1RQ04912 1400 aa22.65■■□□□ 1.22
LAMA4-216ENST00000521690 PPIP5K1Q6PFW1 1433 aa22.65■■□□□ 1.22
LAMA4-216ENST00000521690 C1orf167Q5SNV9 1468 aa22.63■■□□□ 1.21
LAMA4-216ENST00000521690 PLEKHG3A1L390 1219 aa22.63■■□□□ 1.21
LAMA4-216ENST00000521690 TMC1Q8TDI8 760 aa22.63■■□□□ 1.21
LAMA4-216ENST00000521690 RGPD8O14715 1765 aaPredicted RBP22.63■■□□□ 1.21
LAMA4-216ENST00000521690 DDX10Q13206 875 aaKnown RBP22.62■■□□□ 1.21
LAMA4-216ENST00000521690 SLC12A5Q9H2X9 1139 aa22.62■■□□□ 1.21
LAMA4-216ENST00000521690 CABP1Q9NZU7 370 aa22.62■■□□□ 1.21
LAMA4-216ENST00000521690 ANKRD36BQ8N2N9 1353 aa22.62■■□□□ 1.21
LAMA4-216ENST00000521690 NUTM2FA1L443 756 aa22.61■■□□□ 1.21
LAMA4-216ENST00000521690 TERF2IPQ9NYB0 399 aa22.61■■□□□ 1.21
LAMA4-216ENST00000521690 KIF1AQ12756 1690 aa22.59■■□□□ 1.21
LAMA4-216ENST00000521690 CPSF1Q10570 1443 aaKnown RBP22.58■■□□□ 1.21
LAMA4-216ENST00000521690 HDGFL2Q7Z4V5 671 aaPredicted RBP22.58■■□□□ 1.21
LAMA4-216ENST00000521690 PANK3Q9H999 370 aa22.58■■□□□ 1.21
LAMA4-216ENST00000521690 POLR3AO14802 1390 aaPredicted RBP22.58■■□□□ 1.21
LAMA4-216ENST00000521690 CD163L1Q9NR16 1453 aa22.58■■□□□ 1.2
LAMA4-216ENST00000521690 ZNF692Q9BU19 519 aaPredicted RBP22.57■■□□□ 1.2
LAMA4-216ENST00000521690 SLAIN2Q9P270 581 aa22.57■■□□□ 1.2
LAMA4-216ENST00000521690 PHF8Q9UPP1 1060 aa22.57■■□□□ 1.2
LAMA4-216ENST00000521690 AKAP12Q02952 1782 aa22.56■■□□□ 1.2
LAMA4-216ENST00000521690 ESCO1Q5FWF5 840 aa22.56■■□□□ 1.2
LAMA4-216ENST00000521690 A0A1W2PP64 1363 aa22.55■■□□□ 1.2
LAMA4-216ENST00000521690 CERKQ8TCT0 537 aa22.55■■□□□ 1.2
LAMA4-216ENST00000521690 ACEP12821 1306 aa22.55■■□□□ 1.2
LAMA4-216ENST00000521690 NGDNQ8NEJ9 315 aaKnown RBP22.53■■□□□ 1.2
LAMA4-216ENST00000521690 ORAI2Q96SN7 254 aa22.53■■□□□ 1.2
LAMA4-216ENST00000521690 MON2Q7Z3U7 1717 aa22.53■■□□□ 1.2
LAMA4-216ENST00000521690 PMFBP1Q8TBY8 1022 aa22.52■■□□□ 1.2
LAMA4-216ENST00000521690 BRD4O60885 1362 aaPredicted RBP22.51■■□□□ 1.19
LAMA4-216ENST00000521690 KTN1Q86UP2 1357 aaKnown RBP22.51■■□□□ 1.19
LAMA4-216ENST00000521690 PER1O15534 1290 aaPredicted RBP22.51■■□□□ 1.19
LAMA4-216ENST00000521690 TOM1O60784 492 aa22.51■■□□□ 1.19
LAMA4-216ENST00000521690 CARD14Q9BXL6 1004 aa22.5■■□□□ 1.19
LAMA4-216ENST00000521690 USP6P35125 1406 aa22.49■■□□□ 1.19
LAMA4-216ENST00000521690 EDC4Q6P2E9 1401 aaKnown RBP22.49■■□□□ 1.19
LAMA4-216ENST00000521690 KNSTRNQ9Y448 316 aa22.49■■□□□ 1.19
LAMA4-216ENST00000521690 BRINP3Q76B58 766 aa22.48■■□□□ 1.19
LAMA4-216ENST00000521690 NSD3Q9BZ95 1437 aa22.48■■□□□ 1.19
LAMA4-216ENST00000521690 NRKQ7Z2Y5 1582 aa22.47■■□□□ 1.19
LAMA4-216ENST00000521690 DIEXFQ68CQ4 756 aaKnown RBP22.46■■□□□ 1.19
LAMA4-216ENST00000521690 NPHP3Q7Z494 1330 aa22.46■■□□□ 1.19
LAMA4-216ENST00000521690 NPC1L1Q9UHC9 1359 aa22.46■■□□□ 1.19
LAMA4-216ENST00000521690 SSH2Q76I76 1423 aa22.46■■□□□ 1.19
LAMA4-216ENST00000521690 PSME1Q06323 249 aa22.45■■□□□ 1.18
LAMA4-216ENST00000521690 ILDR1Q86SU0 546 aaPredicted RBP22.45■■□□□ 1.18
LAMA4-216ENST00000521690 CGNL1Q0VF96 1302 aa22.45■■□□□ 1.18
LAMA4-216ENST00000521690 FOXO3O43524 673 aa22.44■■□□□ 1.18
LAMA4-216ENST00000521690 ROBO1Q9Y6N7 1651 aa22.44■■□□□ 1.18
LAMA4-216ENST00000521690 NSD2O96028 1365 aa22.43■■□□□ 1.18
LAMA4-216ENST00000521690 TTC21AQ8NDW8 1320 aa22.43■■□□□ 1.18
LAMA4-216ENST00000521690 UBAP1LF5GYI3 381 aa22.43■■□□□ 1.18
LAMA4-216ENST00000521690 NHSL1Q5SYE7 1610 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms