RNA–Protein interactions for RNA: ENST00000521640.5

CTNNA1-228, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-228ENST00000521640 KIF15Q9NS87 1388 aa9.53□□□□□ -0.88
CTNNA1-228ENST00000521640 NEUROD1Q13562 356 aa9.53□□□□□ -0.88
CTNNA1-228ENST00000521640 TRIM52Q96A61 297 aa9.53□□□□□ -0.88
CTNNA1-228ENST00000521640 ANO8Q9HCE9 1232 aaPredicted RBP9.53□□□□□ -0.88
CTNNA1-228ENST00000521640 MAGI2Q86UL8 1455 aa9.53□□□□□ -0.88
CTNNA1-228ENST00000521640 DUOX2Q9NRD8 1548 aa9.52□□□□□ -0.88
CTNNA1-228ENST00000521640 ARHGEF12Q9NZN5 1544 aa9.52□□□□□ -0.88
CTNNA1-228ENST00000521640 RTEL1-TNFRSF6BF6WH68 1400 aa9.52□□□□□ -0.89
CTNNA1-228ENST00000521640 CENPBP07199 599 aaPredicted RBP9.52□□□□□ -0.89
CTNNA1-228ENST00000521640 VSIG10Q8N0Z9 540 aa9.52□□□□□ -0.89
CTNNA1-228ENST00000521640 ERBINQ96RT1 1412 aa9.52□□□□□ -0.89
CTNNA1-228ENST00000521640 CDAN1Q8IWY9 1227 aa9.51□□□□□ -0.89
CTNNA1-228ENST00000521640 ZNF777Q9ULD5 760 aaPredicted RBP9.51□□□□□ -0.89
CTNNA1-228ENST00000521640 ARIH1Q9Y4X5 557 aaPredicted RBP9.51□□□□□ -0.89
CTNNA1-228ENST00000521640 IQGAP3Q86VI3 1631 aa9.5□□□□□ -0.89
CTNNA1-228ENST00000521640 CFAP74Q9C0B2 1584 aa9.5□□□□□ -0.89
CTNNA1-228ENST00000521640 PDIA6Q15084 440 aa9.49□□□□□ -0.89
CTNNA1-228ENST00000521640 EFCAB2Q5VUJ9 269 aa9.49□□□□□ -0.89
CTNNA1-228ENST00000521640 ATP10AO60312 1499 aa9.48□□□□□ -0.89
CTNNA1-228ENST00000521640 FAM135AQ9P2D6 1515 aa9.48□□□□□ -0.89
CTNNA1-228ENST00000521640 POLR1AO95602 1720 aaPredicted RBP9.48□□□□□ -0.89
CTNNA1-228ENST00000521640 UHRF1BP1Q6BDS2 1440 aa9.48□□□□□ -0.89
CTNNA1-228ENST00000521640 ZFYVE16Q7Z3T8 1539 aa9.47□□□□□ -0.89
CTNNA1-228ENST00000521640 INO80Q9ULG1 1556 aaPredicted RBP9.47□□□□□ -0.89
CTNNA1-228ENST00000521640 EIF2AK4Q9P2K8 1649 aaKnown RBP9.47□□□□□ -0.89
CTNNA1-228ENST00000521640 DEPDC5O75140 1603 aa9.46□□□□□ -0.89
CTNNA1-228ENST00000521640 HNRNPMP52272 730 aaKnown RBP eCLIP9.46□□□□□ -0.9
CTNNA1-228ENST00000521640 FOSBP53539 338 aa9.46□□□□□ -0.9
CTNNA1-228ENST00000521640 POTEEQ6S8J3 1075 aa9.46□□□□□ -0.9
CTNNA1-228ENST00000521640 ZNF687Q8N1G0 1237 aa9.46□□□□□ -0.9
CTNNA1-228ENST00000521640 ZNF454Q8N9F8 522 aa9.46□□□□□ -0.9
CTNNA1-228ENST00000521640 ARHGEF1Q92888 912 aaKnown RBP9.46□□□□□ -0.9
CTNNA1-228ENST00000521640 KRTAP3-3Q9BYR6 98 aa9.46□□□□□ -0.9
CTNNA1-228ENST00000521640 KRTAP3-2Q9BYR7 98 aa9.46□□□□□ -0.9
CTNNA1-228ENST00000521640 NUP155O75694 1391 aa9.46□□□□□ -0.9
CTNNA1-228ENST00000521640 DDX12PQ92771 950 aa9.44□□□□□ -0.9
CTNNA1-228ENST00000521640 PCDHGA10Q9Y5H3 936 aa9.44□□□□□ -0.9
CTNNA1-228ENST00000521640 ASXL2Q76L83 1435 aa9.44□□□□□ -0.9
CTNNA1-228ENST00000521640 FANCAO15360 1455 aa9.44□□□□□ -0.9
CTNNA1-228ENST00000521640 RALGAPBQ86X10 1494 aa9.43□□□□□ -0.9
CTNNA1-228ENST00000521640 SPDYE16A6NNV3 312 aaPredicted RBP9.43□□□□□ -0.9
CTNNA1-228ENST00000521640 L3MBTL2Q969R5 705 aa9.43□□□□□ -0.9
CTNNA1-228ENST00000521640 NEURL4Q96JN8 1562 aa9.42□□□□□ -0.9
CTNNA1-228ENST00000521640 ATP7AQ04656 1500 aa9.42□□□□□ -0.9
CTNNA1-228ENST00000521640 SPATA31E1Q6ZUB1 1445 aa9.42□□□□□ -0.9
CTNNA1-228ENST00000521640 PSDA5PKW4 1024 aaPredicted RBP9.42□□□□□ -0.9
CTNNA1-228ENST00000521640 PTGER2P43116 358 aa9.42□□□□□ -0.9
CTNNA1-228ENST00000521640 PPP4R3BQ5MIZ7 849 aa9.42□□□□□ -0.9
CTNNA1-228ENST00000521640 AXIN2Q9Y2T1 843 aa9.42□□□□□ -0.9
CTNNA1-228ENST00000521640 LAMC1P11047 1609 aa9.42□□□□□ -0.9
CTNNA1-228ENST00000521640 VWDEQ8N2E2 1590 aa9.41□□□□□ -0.9
CTNNA1-228ENST00000521640 TRAPPC8Q9Y2L5 1435 aa9.41□□□□□ -0.9
CTNNA1-228ENST00000521640 EIF4G2P78344 907 aaKnown RBP eCLIP9.41□□□□□ -0.9
CTNNA1-228ENST00000521640 ADGRL1O94910 1474 aa9.4□□□□□ -0.9
CTNNA1-228ENST00000521640 BCORL1Q5H9F3 1711 aa9.4□□□□□ -0.9
CTNNA1-228ENST00000521640 CCER2I3L3R5 266 aa9.4□□□□□ -0.9
CTNNA1-228ENST00000521640 BCANQ96GW7 911 aa9.4□□□□□ -0.9
CTNNA1-228ENST00000521640 ADAM33Q9BZ11 813 aa9.4□□□□□ -0.9
CTNNA1-228ENST00000521640 PCDH10Q9P2E7 1040 aa9.4□□□□□ -0.9
CTNNA1-228ENST00000521640 KDM5CP41229 1560 aa9.4□□□□□ -0.9
CTNNA1-228ENST00000521640 PRDM15P57071 1507 aaPredicted RBP9.4□□□□□ -0.91
CTNNA1-228ENST00000521640 ZNF518AQ6AHZ1 1483 aa9.4□□□□□ -0.91
CTNNA1-228ENST00000521640 TET3O43151 1660 aa9.39□□□□□ -0.91
CTNNA1-228ENST00000521640 SPAG9O60271 1321 aaKnown RBP9.39□□□□□ -0.91
CTNNA1-228ENST00000521640 ARID4BQ4LE39 1312 aaPredicted RBP9.39□□□□□ -0.91
CTNNA1-228ENST00000521640 PHF14O94880 888 aa9.39□□□□□ -0.91
CTNNA1-228ENST00000521640 MLLT3P42568 568 aaPredicted RBP9.39□□□□□ -0.91
CTNNA1-228ENST00000521640 PRIM1P49642 420 aaKnown RBP9.39□□□□□ -0.91
CTNNA1-228ENST00000521640 ZDHHC16Q969W1 377 aa9.39□□□□□ -0.91
CTNNA1-228ENST00000521640 KCNH8Q96L42 1107 aa9.39□□□□□ -0.91
CTNNA1-228ENST00000521640 NEO1Q92859 1461 aa9.39□□□□□ -0.91
CTNNA1-228ENST00000521640 CCDC144AA2RUR9 1427 aa9.39□□□□□ -0.91
CTNNA1-228ENST00000521640 GRXCR2A6NFK2 248 aa9.38□□□□□ -0.91
CTNNA1-228ENST00000521640 PSEN2P49810 448 aa9.38□□□□□ -0.91
CTNNA1-228ENST00000521640 RNF17Q9BXT8 1623 aaKnown RBP9.38□□□□□ -0.91
CTNNA1-228ENST00000521640 GLI2P10070 1586 aa9.37□□□□□ -0.91
CTNNA1-228ENST00000521640 TRPM2O94759 1503 aa9.37□□□□□ -0.91
CTNNA1-228ENST00000521640 LMTK2Q8IWU2 1503 aa9.37□□□□□ -0.91
CTNNA1-228ENST00000521640 MLH3Q9UHC1 1453 aa9.37□□□□□ -0.91
CTNNA1-228ENST00000521640 SEMA3EO15041 775 aa9.37□□□□□ -0.91
CTNNA1-228ENST00000521640 STAC3Q96MF2 364 aa9.37□□□□□ -0.91
CTNNA1-228ENST00000521640 PLA2R1Q13018 1463 aa9.36□□□□□ -0.91
CTNNA1-228ENST00000521640 HSPA5P11021 654 aaKnown RBP9.36□□□□□ -0.91
CTNNA1-228ENST00000521640 NBR1Q14596 966 aa9.36□□□□□ -0.91
CTNNA1-228ENST00000521640 TYW1BQ6NUM6 668 aa9.36□□□□□ -0.91
CTNNA1-228ENST00000521640 BCL2L12Q9HB09 334 aa9.36□□□□□ -0.91
CTNNA1-228ENST00000521640 PTPRTO14522 1441 aa9.36□□□□□ -0.91
CTNNA1-228ENST00000521640 POGZQ7Z3K3 1410 aa9.36□□□□□ -0.91
CTNNA1-228ENST00000521640 SCAPERQ9BY12 1400 aa9.36□□□□□ -0.91
CTNNA1-228ENST00000521640 CNTLNQ9NXG0 1405 aa9.36□□□□□ -0.91
CTNNA1-228ENST00000521640 DHX29Q7Z478 1369 aaKnown RBP9.36□□□□□ -0.91
CTNNA1-228ENST00000521640 TRPM1Q7Z4N2 1603 aa9.35□□□□□ -0.91
CTNNA1-228ENST00000521640 KIDINS220Q9ULH0 1771 aa9.35□□□□□ -0.91
CTNNA1-228ENST00000521640 PBX2P40425 430 aa9.35□□□□□ -0.91
CTNNA1-228ENST00000521640 DDX10Q13206 875 aaKnown RBP9.35□□□□□ -0.91
CTNNA1-228ENST00000521640 SPHKAPQ2M3C7 1700 aa9.35□□□□□ -0.91
CTNNA1-228ENST00000521640 NBPF8Q3BBV2 869 aa9.35□□□□□ -0.91
CTNNA1-228ENST00000521640 DMRTA1Q5VZB9 504 aa9.35□□□□□ -0.91
CTNNA1-228ENST00000521640 RBM33Q96EV2 1170 aaKnown RBP9.35□□□□□ -0.91
CTNNA1-228ENST00000521640 KCNK17Q96T54 332 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms