RNA–Protein interactions for RNA: ENST00000521611.1

RB1CC1-208, Transcript of RB1 inducible coiled-coil 1, human

TSL 5

Gene RB1CC1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RB1CC1-208	ENST00000521611	PRAG1	Q86YV5	1406 aa		34.01	■■■■□ 3.03
RB1CC1-208	ENST00000521611	FOXD1	Q16676	465 aa		34	■■■■□ 3.03
RB1CC1-208	ENST00000521611	XPC	Q01831	940 aa	Predicted RBP	33.99	■■■■□ 3.03
RB1CC1-208	ENST00000521611	ATAD2	Q6PL18	1390 aa		33.98	■■■■□ 3.03
RB1CC1-208	ENST00000521611	COL22A1	Q8NFW1	1626 aa	Predicted RBP	33.97	■■■■□ 3.03
RB1CC1-208	ENST00000521611	NUTM2F	A1L443	756 aa		33.96	■■■■□ 3.03
RB1CC1-208	ENST00000521611	FNBP4	Q8N3X1	1017 aa	Predicted RBP	33.96	■■■■□ 3.03
RB1CC1-208	ENST00000521611	STK26	Q9P289	416 aa		33.95	■■■■□ 3.03
RB1CC1-208	ENST00000521611	NPHP3	Q7Z494	1330 aa		33.94	■■■■□ 3.02
RB1CC1-208	ENST00000521611	CDC42BPG	Q6DT37	1551 aa		33.94	■■■■□ 3.02
RB1CC1-208	ENST00000521611	FOXO3	O43524	673 aa		33.93	■■■■□ 3.02
RB1CC1-208	ENST00000521611	ADGRF5	Q8IZF2	1346 aa		33.93	■■■■□ 3.02
RB1CC1-208	ENST00000521611	ATRN	O75882	1429 aa		33.93	■■■■□ 3.02
RB1CC1-208	ENST00000521611	MYOM2	P54296	1465 aa		33.92	■■■■□ 3.02
RB1CC1-208	ENST00000521611	PXDN	Q92626	1479 aa		33.91	■■■■□ 3.02
RB1CC1-208	ENST00000521611	RGL3	Q3MIN7	710 aa		33.91	■■■■□ 3.02
RB1CC1-208	ENST00000521611	WAPL	Q7Z5K2	1190 aa		33.91	■■■■□ 3.02
RB1CC1-208	ENST00000521611	EP400	Q96L91	3159 aa		33.91	■■■■□ 3.02
RB1CC1-208	ENST00000521611	BCL9L	Q86UU0	1499 aa		33.85	■■■■□ 3.01
RB1CC1-208	ENST00000521611	MARF1	Q9Y4F3	1742 aa	Known RBP	33.84	■■■■□ 3.01
RB1CC1-208	ENST00000521611	TMEM132E	Q6IEE7	984 aa		33.84	■■■■□ 3.01
RB1CC1-208	ENST00000521611	CCDC144A	A2RUR9	1427 aa		33.83	■■■■□ 3.01
RB1CC1-208	ENST00000521611	PLEKHH1	Q9ULM0	1364 aa		33.83	■■■■□ 3.01
RB1CC1-208	ENST00000521611	LRPPRC	P42704	1394 aa	Known RBP	33.8	■■■■□ 3
RB1CC1-208	ENST00000521611	TECPR2	O15040	1411 aa		33.78	■■■■□ 3
RB1CC1-208	ENST00000521611	GJD4	Q96KN9	370 aa	Predicted RBP	33.77	■■■■□ 3
RB1CC1-208	ENST00000521611	SPATA31E1	Q6ZUB1	1445 aa		33.77	■■■■□ 3
RB1CC1-208	ENST00000521611	IFT172	Q9UG01	1749 aa		33.76	■■■■□ 3
RB1CC1-208	ENST00000521611	ANKRD30B	Q9BXX2	1392 aa		33.74	■■■□□ 2.99
RB1CC1-208	ENST00000521611	ZRANB1	Q9UGI0	708 aa		33.74	■■■□□ 2.99
RB1CC1-208	ENST00000521611	ABCC11	Q96J66	1382 aa		33.73	■■■□□ 2.99
RB1CC1-208	ENST00000521611	KNDC1	Q76NI1	1749 aa		33.73	■■■□□ 2.99
RB1CC1-208	ENST00000521611	FMN2	Q9NZ56	1722 aa		33.73	■■■□□ 2.99
RB1CC1-208	ENST00000521611	PLEKHG5	O94827	1062 aa		33.73	■■■□□ 2.99
RB1CC1-208	ENST00000521611	MPHOSPH9	Q99550	1183 aa		33.71	■■■□□ 2.99
RB1CC1-208	ENST00000521611	SPATA31A3	Q5VYP0	1347 aa		33.71	■■■□□ 2.99
RB1CC1-208	ENST00000521611	PIK3C2G	O75747	1445 aa		33.7	■■■□□ 2.98
RB1CC1-208	ENST00000521611	YTHDC2	Q9H6S0	1430 aa	Known RBP	33.7	■■■□□ 2.98
RB1CC1-208	ENST00000521611	UNC5CL	Q8IV45	518 aa		33.69	■■■□□ 2.98
RB1CC1-208	ENST00000521611	KRT28	Q7Z3Y7	464 aa		33.68	■■■□□ 2.98
RB1CC1-208	ENST00000521611	RALGAPB	Q86X10	1494 aa		33.68	■■■□□ 2.98
RB1CC1-208	ENST00000521611	KIF1A	Q12756	1690 aa		33.68	■■■□□ 2.98
RB1CC1-208	ENST00000521611	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	33.67	■■■□□ 2.98
RB1CC1-208	ENST00000521611	GLI3	P10071	1580 aa		33.67	■■■□□ 2.98
RB1CC1-208	ENST00000521611	SLIT2	O94813	1529 aa		33.66	■■■□□ 2.98
RB1CC1-208	ENST00000521611	RGPD8	O14715	1765 aa	Predicted RBP	33.65	■■■□□ 2.98
RB1CC1-208	ENST00000521611	HAP1	P54257	671 aa	Predicted RBP	33.65	■■■□□ 2.98
RB1CC1-208	ENST00000521611	CCDC125	Q86Z20	511 aa		33.65	■■■□□ 2.98
RB1CC1-208	ENST00000521611	USP32	Q8NFA0	1604 aa		33.64	■■■□□ 2.98
RB1CC1-208	ENST00000521611	CABLES1	Q8TDN4	633 aa		33.63	■■■□□ 2.97
RB1CC1-208	ENST00000521611	SAFB2	Q14151	953 aa	Known RBP eCLIP	33.61	■■■□□ 2.97	4e-7	■■□□□ 13.3
RB1CC1-208	ENST00000521611	PHF8	Q9UPP1	1060 aa		33.6	■■■□□ 2.97
RB1CC1-208	ENST00000521611	BRWD3	Q6RI45	1802 aa		33.59	■■■□□ 2.97
RB1CC1-208	ENST00000521611	LMOD2	Q6P5Q4	547 aa		33.59	■■■□□ 2.97
RB1CC1-208	ENST00000521611	TNS3	Q68CZ2	1445 aa		33.58	■■■□□ 2.97
RB1CC1-208	ENST00000521611	CFAP70	Q5T0N1	1121 aa		33.57	■■■□□ 2.96
RB1CC1-208	ENST00000521611	CCDC9	Q9Y3X0	531 aa	Known RBP	33.56	■■■□□ 2.96
RB1CC1-208	ENST00000521611	PSME1	Q06323	249 aa		33.55	■■■□□ 2.96
RB1CC1-208	ENST00000521611	DEFB132	Q7Z7B7	95 aa		33.55	■■■□□ 2.96
RB1CC1-208	ENST00000521611	C14orf93	Q9H972	538 aa	Known RBP	33.55	■■■□□ 2.96
RB1CC1-208	ENST00000521611	BLM	P54132	1417 aa	Predicted RBP	33.54	■■■□□ 2.96
RB1CC1-208	ENST00000521611	SEPT12	Q8IYM1	358 aa		33.54	■■■□□ 2.96
RB1CC1-208	ENST00000521611	SIRT1	Q96EB6	747 aa		33.53	■■■□□ 2.96
RB1CC1-208	ENST00000521611	PRAM1	Q96QH2	718 aa		33.53	■■■□□ 2.96
RB1CC1-208	ENST00000521611	PLCH1	Q4KWH8	1693 aa		33.52	■■■□□ 2.96
RB1CC1-208	ENST00000521611	DHX57	Q6P158	1386 aa	Known RBP	33.52	■■■□□ 2.96
RB1CC1-208	ENST00000521611	VPS72	Q15906	364 aa		33.5	■■■□□ 2.95
RB1CC1-208	ENST00000521611	PMFBP1	Q8TBY8	1022 aa		33.5	■■■□□ 2.95
RB1CC1-208	ENST00000521611	NRXN1	Q9ULB1	1477 aa		33.5	■■■□□ 2.95
RB1CC1-208	ENST00000521611	ABCA3	Q99758	1704 aa		33.49	■■■□□ 2.95
RB1CC1-208	ENST00000521611	SF3B2	Q13435	895 aa	Known RBP	33.47	■■■□□ 2.95
RB1CC1-208	ENST00000521611	SBNO1	A3KN83	1393 aa		33.47	■■■□□ 2.95
RB1CC1-208	ENST00000521611	POGK	Q9P215	609 aa		33.46	■■■□□ 2.95
RB1CC1-208	ENST00000521611	NWD2	Q9ULI1	1742 aa		33.45	■■■□□ 2.94
RB1CC1-208	ENST00000521611		A0A0G2JS52	829 aa		33.44	■■■□□ 2.94
RB1CC1-208	ENST00000521611	MYT1	Q01538	1121 aa		33.44	■■■□□ 2.94
RB1CC1-208	ENST00000521611	ARHGEF10	O15013	1369 aa		33.44	■■■□□ 2.94
RB1CC1-208	ENST00000521611	FAM83G	A6ND36	823 aa		33.42	■■■□□ 2.94
RB1CC1-208	ENST00000521611	KRT27	Q7Z3Y8	459 aa		33.41	■■■□□ 2.94
RB1CC1-208	ENST00000521611	HIRIP3	Q9BW71	556 aa	Predicted RBP	33.41	■■■□□ 2.94
RB1CC1-208	ENST00000521611	ONECUT3	O60422	494 aa	Predicted RBP	33.37	■■■□□ 2.93
RB1CC1-208	ENST00000521611	TRAK1	Q9UPV9	953 aa		33.37	■■■□□ 2.93
RB1CC1-208	ENST00000521611	ANKAR	Q7Z5J8	1434 aa		33.36	■■■□□ 2.93
RB1CC1-208	ENST00000521611	DLC1	Q96QB1	1528 aa		33.36	■■■□□ 2.93
RB1CC1-208	ENST00000521611	MINK1	Q8N4C8	1332 aa	Predicted RBP	33.35	■■■□□ 2.93
RB1CC1-208	ENST00000521611	FAM98C	Q17RN3	349 aa	Known RBP	33.35	■■■□□ 2.93
RB1CC1-208	ENST00000521611	BTG4	Q9NY30	223 aa		33.34	■■■□□ 2.93
RB1CC1-208	ENST00000521611	TRPM3	Q9HCF6	1732 aa	Predicted RBP	33.33	■■■□□ 2.93
RB1CC1-208	ENST00000521611	NRAP	Q86VF7	1730 aa		33.33	■■■□□ 2.93
RB1CC1-208	ENST00000521611	ADGRB2	O60241	1585 aa		33.32	■■■□□ 2.92
RB1CC1-208	ENST00000521611	ADGRB1	O14514	1584 aa		33.3	■■■□□ 2.92
RB1CC1-208	ENST00000521611	PRR36	Q9H6K5	1346 aa		33.29	■■■□□ 2.92
RB1CC1-208	ENST00000521611	PSD	A5PKW4	1024 aa	Predicted RBP	33.29	■■■□□ 2.92
RB1CC1-208	ENST00000521611	KDM2A	Q9Y2K7	1162 aa		33.29	■■■□□ 2.92
RB1CC1-208	ENST00000521611	GPRASP1	Q5JY77	1395 aa		33.29	■■■□□ 2.92
RB1CC1-208	ENST00000521611	ALS2	Q96Q42	1657 aa		33.28	■■■□□ 2.92
RB1CC1-208	ENST00000521611	FAM182B	Q5T319	152 aa		33.27	■■■□□ 2.92
RB1CC1-208	ENST00000521611	ACIN1	Q9UKV3	1341 aa	Known RBP	33.27	■■■□□ 2.92
RB1CC1-208	ENST00000521611	BAG6	P46379	1132 aa		33.26	■■■□□ 2.91
RB1CC1-208	ENST00000521611	COL14A1	Q05707	1796 aa	Known RBP	33.25	■■■□□ 2.91

Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms