RNA–Protein interactions for RNA: ENST00000521379.1

CRNKL1-206, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 5

Gene CRNKL1, Length 673 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-206ENST00000521379 PRPF38BQ5VTL8 546 aaKnown RBP13.09□□□□□ -0.31
CRNKL1-206ENST00000521379 BRICD5Q6PL45 260 aa13.09□□□□□ -0.31
CRNKL1-206ENST00000521379 KCNC4Q03721 635 aa13.08□□□□□ -0.32
CRNKL1-206ENST00000521379 RNF19BQ6ZMZ0 732 aa13.08□□□□□ -0.32
CRNKL1-206ENST00000521379 PROCA1Q8NCQ7 364 aaPredicted RBP13.08□□□□□ -0.32
CRNKL1-206ENST00000521379 PCMTD1Q96MG8 357 aaPredicted RBP13.08□□□□□ -0.32
CRNKL1-206ENST00000521379 FMNL1O95466 1100 aaPredicted RBP13.07□□□□□ -0.32
CRNKL1-206ENST00000521379 IFFO2Q5TF58 517 aa13.07□□□□□ -0.32
CRNKL1-206ENST00000521379 TLL1O43897 1013 aa13.05□□□□□ -0.32
CRNKL1-206ENST00000521379 LILRB3O75022 631 aa13.05□□□□□ -0.32
CRNKL1-206ENST00000521379 ZBTB3Q9H5J0 574 aa13.05□□□□□ -0.32
CRNKL1-206ENST00000521379 ADH1BP00325 375 aa13.04□□□□□ -0.32
CRNKL1-206ENST00000521379 HRCP23327 699 aa13.04□□□□□ -0.32
CRNKL1-206ENST00000521379 MTMR2Q13614 643 aa13.04□□□□□ -0.32
CRNKL1-206ENST00000521379 QPCTQ16769 361 aa13.04□□□□□ -0.32
CRNKL1-206ENST00000521379 SPDYE5A6NIY4 337 aa13.03□□□□□ -0.32
CRNKL1-206ENST00000521379 RETREG3Q86VR2 466 aa13.03□□□□□ -0.32
CRNKL1-206ENST00000521379 SYMPKQ92797 1274 aaKnown RBP13.03□□□□□ -0.32
CRNKL1-206ENST00000521379 SPSB2Q99619 263 aa13.03□□□□□ -0.32
CRNKL1-206ENST00000521379 C6orf229H3BNL8 230 aa13.02□□□□□ -0.33
CRNKL1-206ENST00000521379 CSPP1Q1MSJ5 1256 aa13.02□□□□□ -0.33
CRNKL1-206ENST00000521379 PPP2R2DQ66LE6 453 aa13.02□□□□□ -0.33
CRNKL1-206ENST00000521379 USB1Q9BQ65 265 aaKnown RBP13.02□□□□□ -0.33
CRNKL1-206ENST00000521379 MSS51Q4VC12 460 aa13.01□□□□□ -0.33
CRNKL1-206ENST00000521379 NKX2-3Q8TAU0 364 aa13.01□□□□□ -0.33
CRNKL1-206ENST00000521379 CABLES1Q8TDN4 633 aa13.01□□□□□ -0.33
CRNKL1-206ENST00000521379 FBXO31Q5XUX0 539 aaPredicted RBP13□□□□□ -0.33
CRNKL1-206ENST00000521379 FAM160A2Q8N612 972 aaPredicted RBP12.99□□□□□ -0.33
CRNKL1-206ENST00000521379 PLA2G2EQ9NZK7 142 aa12.99□□□□□ -0.33
CRNKL1-206ENST00000521379 RTL5Q5HYW3 569 aaPredicted RBP12.97□□□□□ -0.33
CRNKL1-206ENST00000521379 NUTM2BA6NNL0 878 aaPredicted RBP12.96□□□□□ -0.33
CRNKL1-206ENST00000521379 NUTM2EB1AL46 878 aaPredicted RBP12.96□□□□□ -0.33
CRNKL1-206ENST00000521379 NUTM2DQ5VT03 806 aaPredicted RBP12.96□□□□□ -0.33
CRNKL1-206ENST00000521379 NUTM2AQ8IVF1 878 aaPredicted RBP12.96□□□□□ -0.33
CRNKL1-206ENST00000521379 CFAP99D6REC4 459 aa12.95□□□□□ -0.34
CRNKL1-206ENST00000521379 DESI1Q6ICB0 168 aa12.95□□□□□ -0.34
CRNKL1-206ENST00000521379 PRR7Q8TB68 274 aa12.95□□□□□ -0.34
CRNKL1-206ENST00000521379 ATP1B4Q9UN42 357 aaPredicted RBP12.95□□□□□ -0.34
CRNKL1-206ENST00000521379 MMP16P51512 607 aa12.94□□□□□ -0.34
CRNKL1-206ENST00000521379 SLC6A16Q9GZN6 736 aa12.94□□□□□ -0.34
CRNKL1-206ENST00000521379 RFC5P40937 340 aa12.93□□□□□ -0.34
CRNKL1-206ENST00000521379 DXOO77932 396 aaKnown RBP12.92□□□□□ -0.34
CRNKL1-206ENST00000521379 PRDM9Q9NQV7 894 aa12.92□□□□□ -0.34
CRNKL1-206ENST00000521379 S1PR4O95977 384 aa12.91□□□□□ -0.34
CRNKL1-206ENST00000521379 JUNDP17535 347 aa12.91□□□□□ -0.34
CRNKL1-206ENST00000521379 A0A0G2JS52 829 aa12.88□□□□□ -0.35
CRNKL1-206ENST00000521379 PPP1R18Q6NYC8 613 aa12.88□□□□□ -0.35
CRNKL1-206ENST00000521379 GGCXP38435 758 aa12.87□□□□□ -0.35
CRNKL1-206ENST00000521379 TMEM259Q4ZIN3 620 aa12.87□□□□□ -0.35
CRNKL1-206ENST00000521379 HELBQ8NG08 1087 aaPredicted RBP12.87□□□□□ -0.35
CRNKL1-206ENST00000521379 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.87□□□□□ -0.35
CRNKL1-206ENST00000521379 RNF223E7ERA6 249 aa12.85□□□□□ -0.35
CRNKL1-206ENST00000521379 PTPRNQ16849 979 aa12.85□□□□□ -0.35
CRNKL1-206ENST00000521379 LYPD8Q6UX82 237 aa12.85□□□□□ -0.35
CRNKL1-206ENST00000521379 ANKLE1Q8NAG6 615 aa12.84□□□□□ -0.35
CRNKL1-206ENST00000521379 BANK1Q8NDB2 785 aa12.83□□□□□ -0.36
CRNKL1-206ENST00000521379 AP1G2O75843 785 aa12.82□□□□□ -0.36
CRNKL1-206ENST00000521379 CTDSPL2Q05D32 466 aa12.82□□□□□ -0.36
CRNKL1-206ENST00000521379 TSC1Q92574 1164 aa12.82□□□□□ -0.36
CRNKL1-206ENST00000521379 PPEF1O14829 653 aaPredicted RBP12.81□□□□□ -0.36
CRNKL1-206ENST00000521379 PER1O15534 1290 aaPredicted RBP12.81□□□□□ -0.36
CRNKL1-206ENST00000521379 FCF1Q9Y324 198 aaKnown RBP12.81□□□□□ -0.36
CRNKL1-206ENST00000521379 USP17L8P0C7I0 530 aa12.8□□□□□ -0.36
CRNKL1-206ENST00000521379 NUDT12Q9BQG2 462 aa12.8□□□□□ -0.36
CRNKL1-206ENST00000521379 CCNYL3P0C7X3 344 aa12.79□□□□□ -0.36
CRNKL1-206ENST00000521379 F12P00748 615 aaPredicted RBP12.78□□□□□ -0.36
CRNKL1-206ENST00000521379 EVA1BQ9NVM1 165 aa12.78□□□□□ -0.36
CRNKL1-206ENST00000521379 SOCS7O14512 581 aa12.77□□□□□ -0.37
CRNKL1-206ENST00000521379 PLA2G2CQ5R387 149 aa12.75□□□□□ -0.37
CRNKL1-206ENST00000521379 LRRN4Q8WUT4 740 aa12.75□□□□□ -0.37
CRNKL1-206ENST00000521379 KCNH2Q12809 1159 aa12.74□□□□□ -0.37
CRNKL1-206ENST00000521379 CCDC24Q8N4L8 307 aa12.72□□□□□ -0.37
CRNKL1-206ENST00000521379 EMID1Q96A84 441 aaPredicted RBP12.72□□□□□ -0.37
CRNKL1-206ENST00000521379 PTCRAQ6ISU1 281 aaPredicted RBP12.71□□□□□ -0.37
CRNKL1-206ENST00000521379 MTMR14Q8NCE2 650 aa12.71□□□□□ -0.37
CRNKL1-206ENST00000521379 HMX1Q9NP08 348 aaPredicted RBP12.71□□□□□ -0.37
CRNKL1-206ENST00000521379 SNRKQ9NRH2 765 aa12.71□□□□□ -0.37
CRNKL1-206ENST00000521379 MAP10Q9P2G4 905 aa12.71□□□□□ -0.37
CRNKL1-206ENST00000521379 MCM6Q14566 821 aa12.7□□□□□ -0.38
CRNKL1-206ENST00000521379 GJD4Q96KN9 370 aaPredicted RBP12.69□□□□□ -0.38
CRNKL1-206ENST00000521379 RGS20O76081 388 aa12.68□□□□□ -0.38
CRNKL1-206ENST00000521379 CTHP32929 405 aa12.68□□□□□ -0.38
CRNKL1-206ENST00000521379 RPIAP49247 311 aa12.68□□□□□ -0.38
CRNKL1-206ENST00000521379 FLIIQ13045 1269 aa12.68□□□□□ -0.38
CRNKL1-206ENST00000521379 TRIM34Q9BYJ4 488 aa12.68□□□□□ -0.38
CRNKL1-206ENST00000521379 UNC93B1Q9H1C4 597 aa12.68□□□□□ -0.38
CRNKL1-206ENST00000521379 GTF3C3Q9Y5Q9 886 aa12.68□□□□□ -0.38
CRNKL1-206ENST00000521379 LIAT1Q6ZQX7 453 aa12.67□□□□□ -0.38
CRNKL1-206ENST00000521379 NR6A1Q15406 480 aa12.66□□□□□ -0.38
CRNKL1-206ENST00000521379 V9GY48 417 aaPredicted RBP12.66□□□□□ -0.38
CRNKL1-206ENST00000521379 APBB1O00213 710 aa12.64□□□□□ -0.39
CRNKL1-206ENST00000521379 ZBTB24O43167 697 aaPredicted RBP12.64□□□□□ -0.39
CRNKL1-206ENST00000521379 SLC19A1P41440 591 aa12.64□□□□□ -0.39
CRNKL1-206ENST00000521379 EPS8L1Q8TE68 723 aa12.64□□□□□ -0.39
CRNKL1-206ENST00000521379 TRIM32Q13049 653 aa12.63□□□□□ -0.39
CRNKL1-206ENST00000521379 PRKD2Q9BZL6 878 aa12.63□□□□□ -0.39
CRNKL1-206ENST00000521379 ARMC2Q8NEN0 867 aa12.62□□□□□ -0.39
CRNKL1-206ENST00000521379 SPRYD7Q5W111 196 aa12.6□□□□□ -0.39
CRNKL1-206ENST00000521379 FKBPLQ9UIM3 349 aa12.6□□□□□ -0.39
CRNKL1-206ENST00000521379 ZC3H4Q9UPT8 1303 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms