RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 GFRA3O60609 400 aa6.69□□□□□ -1.34
HMGN1P28-201ENST00000521340 GJA5P36382 358 aa6.69□□□□□ -1.34
HMGN1P28-201ENST00000521340 BLOC1S3Q6QNY0 202 aa6.69□□□□□ -1.34
HMGN1P28-201ENST00000521340 PCDHB3Q9Y5E6 796 aa6.69□□□□□ -1.34
HMGN1P28-201ENST00000521340 V9GY48 417 aaPredicted RBP6.69□□□□□ -1.34
HMGN1P28-201ENST00000521340 SLC10A3P09131 477 aa6.68□□□□□ -1.34
HMGN1P28-201ENST00000521340 SLC4A3P48751 1232 aa6.68□□□□□ -1.34
HMGN1P28-201ENST00000521340 RSBN1LQ6PCB5 846 aaPredicted RBP6.68□□□□□ -1.34
HMGN1P28-201ENST00000521340 RIC3Q7Z5B4 369 aa6.68□□□□□ -1.34
HMGN1P28-201ENST00000521340 COG6Q9Y2V7 657 aa6.68□□□□□ -1.34
HMGN1P28-201ENST00000521340 MOXD2PA6NHM9 499 aa6.67□□□□□ -1.34
HMGN1P28-201ENST00000521340 LILRB3O75022 631 aa6.67□□□□□ -1.34
HMGN1P28-201ENST00000521340 DIXDC1Q155Q3 683 aa6.67□□□□□ -1.34
HMGN1P28-201ENST00000521340 PCDHB15Q9Y5E8 787 aa6.67□□□□□ -1.34
HMGN1P28-201ENST00000521340 ACTN4O43707 911 aaKnown RBP6.66□□□□□ -1.34
HMGN1P28-201ENST00000521340 LAPTM4AQ15012 233 aa6.66□□□□□ -1.34
HMGN1P28-201ENST00000521340 QPCTQ16769 361 aa6.66□□□□□ -1.34
HMGN1P28-201ENST00000521340 MTMR14Q8NCE2 650 aa6.66□□□□□ -1.34
HMGN1P28-201ENST00000521340 EMID1Q96A84 441 aaPredicted RBP6.66□□□□□ -1.34
HMGN1P28-201ENST00000521340 PRR14Q9BWN1 585 aa6.66□□□□□ -1.34
HMGN1P28-201ENST00000521340 RNF223E7ERA6 249 aa6.65□□□□□ -1.34
HMGN1P28-201ENST00000521340 SOCS7O14512 581 aa6.65□□□□□ -1.34
HMGN1P28-201ENST00000521340 TLL1O43897 1013 aa6.65□□□□□ -1.34
HMGN1P28-201ENST00000521340 CFHP08603 1231 aa6.65□□□□□ -1.34
HMGN1P28-201ENST00000521340 NDUFV2P19404 249 aa6.65□□□□□ -1.34
HMGN1P28-201ENST00000521340 HRCP23327 699 aa6.65□□□□□ -1.34
HMGN1P28-201ENST00000521340 TMEM259Q4ZIN3 620 aa6.65□□□□□ -1.34
HMGN1P28-201ENST00000521340 RTL5Q5HYW3 569 aaPredicted RBP6.65□□□□□ -1.34
HMGN1P28-201ENST00000521340 PROSER2Q86WR7 435 aaPredicted RBP6.65□□□□□ -1.34
HMGN1P28-201ENST00000521340 GPR37L1O60883 481 aa6.64□□□□□ -1.35
HMGN1P28-201ENST00000521340 GGCXP38435 758 aa6.64□□□□□ -1.35
HMGN1P28-201ENST00000521340 CCDC82Q8N4S0 544 aa6.64□□□□□ -1.35
HMGN1P28-201ENST00000521340 NRG2O14511 850 aaPredicted RBP6.63□□□□□ -1.35
HMGN1P28-201ENST00000521340 KMT5BQ4FZB7 885 aa6.63□□□□□ -1.35
HMGN1P28-201ENST00000521340 TRAF7Q6Q0C0 670 aa6.63□□□□□ -1.35
HMGN1P28-201ENST00000521340 ZNF777Q9ULD5 760 aaPredicted RBP6.63□□□□□ -1.35
HMGN1P28-201ENST00000521340 PCDHGC3Q9UN70 934 aa6.63□□□□□ -1.35
HMGN1P28-201ENST00000521340 DDX11L8A8MPP1 907 aa6.62□□□□□ -1.35
HMGN1P28-201ENST00000521340 PPEF1O14829 653 aaPredicted RBP6.62□□□□□ -1.35
HMGN1P28-201ENST00000521340 GCGRP47871 477 aa6.62□□□□□ -1.35
HMGN1P28-201ENST00000521340 SULF1Q8IWU6 871 aa6.62□□□□□ -1.35
HMGN1P28-201ENST00000521340 TRIM67Q6ZTA4 783 aa6.61□□□□□ -1.35
HMGN1P28-201ENST00000521340 GJD4Q96KN9 370 aaPredicted RBP6.61□□□□□ -1.35
HMGN1P28-201ENST00000521340 ARID3AQ99856 593 aa6.61□□□□□ -1.35
HMGN1P28-201ENST00000521340 PDZRN3Q9UPQ7 1066 aa6.61□□□□□ -1.35
HMGN1P28-201ENST00000521340 S1PR4O95977 384 aa6.6□□□□□ -1.35
HMGN1P28-201ENST00000521340 SLC19A1P41440 591 aa6.6□□□□□ -1.35
HMGN1P28-201ENST00000521340 TRIM26Q12899 539 aaPredicted RBP6.6□□□□□ -1.35
HMGN1P28-201ENST00000521340 PRPF38BQ5VTL8 546 aaKnown RBP6.6□□□□□ -1.35
HMGN1P28-201ENST00000521340 HOXA2O43364 376 aa6.59□□□□□ -1.35
HMGN1P28-201ENST00000521340 KDM4AO75164 1064 aa6.59□□□□□ -1.35
HMGN1P28-201ENST00000521340 PUS10Q3MIT2 529 aaKnown RBP6.59□□□□□ -1.35
HMGN1P28-201ENST00000521340 LIAT1Q6ZQX7 453 aa6.59□□□□□ -1.35
HMGN1P28-201ENST00000521340 SCUBE3Q8IX30 993 aa6.59□□□□□ -1.35
HMGN1P28-201ENST00000521340 CABLES1Q8TDN4 633 aa6.59□□□□□ -1.35
HMGN1P28-201ENST00000521340 HLA-CQ95604 372 aa6.59□□□□□ -1.35
HMGN1P28-201ENST00000521340 NR1I2O75469 434 aa6.58□□□□□ -1.36
HMGN1P28-201ENST00000521340 ADH1BP00325 375 aa6.58□□□□□ -1.36
HMGN1P28-201ENST00000521340 NUTM1Q86Y26 1132 aa6.58□□□□□ -1.36
HMGN1P28-201ENST00000521340 ANKLE1Q8NAG6 615 aa6.58□□□□□ -1.36
HMGN1P28-201ENST00000521340 GDPD2Q9HCC8 539 aa6.58□□□□□ -1.36
HMGN1P28-201ENST00000521340 USP46P62068 366 aa6.57□□□□□ -1.36
HMGN1P28-201ENST00000521340 IRF5Q13568 498 aa6.57□□□□□ -1.36
HMGN1P28-201ENST00000521340 PLA2G2CQ5R387 149 aa6.57□□□□□ -1.36
HMGN1P28-201ENST00000521340 SPRYD7Q5W111 196 aa6.57□□□□□ -1.36
HMGN1P28-201ENST00000521340 TRIM34Q9BYJ4 488 aa6.57□□□□□ -1.36
HMGN1P28-201ENST00000521340 GUCA2AQ02747 115 aa6.56□□□□□ -1.36
HMGN1P28-201ENST00000521340 RAD21O60216 631 aa6.55□□□□□ -1.36
HMGN1P28-201ENST00000521340 USP17L8P0C7I0 530 aa6.55□□□□□ -1.36
HMGN1P28-201ENST00000521340 CSPP1Q1MSJ5 1256 aa6.55□□□□□ -1.36
HMGN1P28-201ENST00000521340 MORN1Q5T089 497 aa6.55□□□□□ -1.36
HMGN1P28-201ENST00000521340 RSPH4AQ5TD94 716 aa6.55□□□□□ -1.36
HMGN1P28-201ENST00000521340 ZNF598Q86UK7 904 aaKnown RBP6.55□□□□□ -1.36
HMGN1P28-201ENST00000521340 SLC6A16Q9GZN6 736 aa6.55□□□□□ -1.36
HMGN1P28-201ENST00000521340 TBC1D2BQ9UPU7 963 aa6.55□□□□□ -1.36
HMGN1P28-201ENST00000521340 POM121CA8CG34 1229 aa6.54□□□□□ -1.36
HMGN1P28-201ENST00000521340 FDX1P10109 184 aa6.54□□□□□ -1.36
HMGN1P28-201ENST00000521340 CTDSPL2Q05D32 466 aa6.54□□□□□ -1.36
HMGN1P28-201ENST00000521340 RDH13Q8NBN7 331 aa6.54□□□□□ -1.36
HMGN1P28-201ENST00000521340 ADAMTS19Q8TE59 1207 aa6.54□□□□□ -1.36
HMGN1P28-201ENST00000521340 THAP11Q96EK4 314 aa6.54□□□□□ -1.36
HMGN1P28-201ENST00000521340 SPSB2Q99619 263 aa6.54□□□□□ -1.36
HMGN1P28-201ENST00000521340 HMX1Q9NP08 348 aaPredicted RBP6.54□□□□□ -1.36
HMGN1P28-201ENST00000521340 ZNF330Q9Y3S2 320 aaPredicted RBP6.54□□□□□ -1.36
HMGN1P28-201ENST00000521340 AP1G2O75843 785 aa6.53□□□□□ -1.36
HMGN1P28-201ENST00000521340 FUT2Q10981 343 aa6.53□□□□□ -1.36
HMGN1P28-201ENST00000521340 SERPINA10Q9UK55 444 aa6.53□□□□□ -1.36
HMGN1P28-201ENST00000521340 CFAP99D6REC4 459 aa6.52□□□□□ -1.37
HMGN1P28-201ENST00000521340 GDF9O60383 454 aa6.52□□□□□ -1.37
HMGN1P28-201ENST00000521340 SRPK2P78362 688 aaKnown RBP6.52□□□□□ -1.37
HMGN1P28-201ENST00000521340 PRR20EP86478 221 aa6.52□□□□□ -1.37
HMGN1P28-201ENST00000521340 PRR20CP86479 221 aa6.52□□□□□ -1.37
HMGN1P28-201ENST00000521340 PRR20DP86480 221 aa6.52□□□□□ -1.37
HMGN1P28-201ENST00000521340 PRR20BP86481 221 aa6.52□□□□□ -1.37
HMGN1P28-201ENST00000521340 PRR20AP86496 221 aa6.52□□□□□ -1.37
HMGN1P28-201ENST00000521340 ZNF697Q5TEC3 545 aa6.52□□□□□ -1.37
HMGN1P28-201ENST00000521340 FAM160A2Q8N612 972 aaPredicted RBP6.52□□□□□ -1.37
HMGN1P28-201ENST00000521340 ZBTB3Q9H5J0 574 aa6.52□□□□□ -1.37
HMGN1P28-201ENST00000521340 SLC27A5Q9Y2P5 690 aa6.52□□□□□ -1.37
HMGN1P28-201ENST00000521340 ATP6V1AP38606 617 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms