RNA–Protein interactions for RNA: ENST00000521338.1

PCM1-214, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-214ENST00000521338 WNT7AO00755 349 aa8.87□□□□□ -0.99
PCM1-214ENST00000521338 MMP16P51512 607 aa8.87□□□□□ -0.99
PCM1-214ENST00000521338 NFX1Q12986 1120 aaKnown RBP8.87□□□□□ -0.99
PCM1-214ENST00000521338 ZBTB24O43167 697 aaPredicted RBP8.85□□□□□ -0.99
PCM1-214ENST00000521338 WFS1O76024 890 aa8.85□□□□□ -0.99
PCM1-214ENST00000521338 LCE2CQ5TA81 110 aa8.85□□□□□ -0.99
PCM1-214ENST00000521338 TTC24A2A3L6 582 aaPredicted RBP8.84□□□□□ -0.99
PCM1-214ENST00000521338 TRIM32Q13049 653 aa8.84□□□□□ -0.99
PCM1-214ENST00000521338 SNIP1Q8TAD8 396 aaKnown RBP8.84□□□□□ -0.99
PCM1-214ENST00000521338 CD46P15529 392 aa8.83□□□□□ -1
PCM1-214ENST00000521338 MRGPRX2Q96LB1 330 aa8.83□□□□□ -1
PCM1-214ENST00000521338 J3QL48 77 aa8.82□□□□□ -1
PCM1-214ENST00000521338 DXOO77932 396 aaKnown RBP8.82□□□□□ -1
PCM1-214ENST00000521338 GRIPAP1Q4V328 841 aa8.82□□□□□ -1
PCM1-214ENST00000521338 ATP13A2Q9NQ11 1180 aa8.82□□□□□ -1
PCM1-214ENST00000521338 WIPF1O43516 503 aa8.81□□□□□ -1
PCM1-214ENST00000521338 Q3C1V9 767 aa8.81□□□□□ -1
PCM1-214ENST00000521338 SNRPBP14678 240 aaKnown RBP8.8□□□□□ -1
PCM1-214ENST00000521338 USB1Q9BQ65 265 aaKnown RBP8.8□□□□□ -1
PCM1-214ENST00000521338 GPIHBP1Q8IV16 184 aa8.79□□□□□ -1
PCM1-214ENST00000521338 HLA-CQ95604 372 aa8.79□□□□□ -1
PCM1-214ENST00000521338 SKOR1P84550 965 aa8.78□□□□□ -1
PCM1-214ENST00000521338 HPS1Q92902 700 aa8.78□□□□□ -1
PCM1-214ENST00000521338 KDM4AO75164 1064 aa8.77□□□□□ -1.01
PCM1-214ENST00000521338 TRIM47Q96LD4 638 aa8.77□□□□□ -1.01
PCM1-214ENST00000521338 TERTO14746 1132 aaKnown RBP8.75□□□□□ -1.01
PCM1-214ENST00000521338 RC3H1Q5TC82 1133 aaKnown RBP8.75□□□□□ -1.01
PCM1-214ENST00000521338 STK17AQ9UEE5 414 aa8.75□□□□□ -1.01
PCM1-214ENST00000521338 WNT7BP56706 349 aa8.74□□□□□ -1.01
PCM1-214ENST00000521338 MAP2K5Q13163 448 aa8.74□□□□□ -1.01
PCM1-214ENST00000521338 REPIN1Q9BWE0 567 aaKnown RBP8.74□□□□□ -1.01
PCM1-214ENST00000521338 IRF6O14896 467 aa8.73□□□□□ -1.01
PCM1-214ENST00000521338 HOXA2O43364 376 aa8.73□□□□□ -1.01
PCM1-214ENST00000521338 USP46P62068 366 aa8.73□□□□□ -1.01
PCM1-214ENST00000521338 PLCB2Q00722 1185 aa8.73□□□□□ -1.01
PCM1-214ENST00000521338 SENP2Q9HC62 589 aa8.73□□□□□ -1.01
PCM1-214ENST00000521338 MDM2Q00987 491 aaPredicted RBP8.71□□□□□ -1.02
PCM1-214ENST00000521338 GUCA2AQ02747 115 aa8.71□□□□□ -1.02
PCM1-214ENST00000521338 CCDC24Q8N4L8 307 aa8.71□□□□□ -1.02
PCM1-214ENST00000521338 SIAH2O43255 324 aa8.7□□□□□ -1.02
PCM1-214ENST00000521338 INSM1Q01101 510 aaPredicted RBP8.7□□□□□ -1.02
PCM1-214ENST00000521338 SYMPKQ92797 1274 aaKnown RBP8.7□□□□□ -1.02
PCM1-214ENST00000521338 JUNDP17535 347 aa8.69□□□□□ -1.02
PCM1-214ENST00000521338 PTCRAQ6ISU1 281 aaPredicted RBP8.69□□□□□ -1.02
PCM1-214ENST00000521338 KIFC2Q96AC6 838 aa8.69□□□□□ -1.02
PCM1-214ENST00000521338 MINK1Q8N4C8 1332 aaPredicted RBP8.68□□□□□ -1.02
PCM1-214ENST00000521338 ALDH1A1P00352 501 aa8.67□□□□□ -1.02
PCM1-214ENST00000521338 KDM2AQ9Y2K7 1162 aa8.67□□□□□ -1.02
PCM1-214ENST00000521338 FAM217BQ9NTX9 383 aaPredicted RBP8.66□□□□□ -1.02
PCM1-214ENST00000521338 TRIM46Q7Z4K8 759 aa8.65□□□□□ -1.02
PCM1-214ENST00000521338 LORP23490 312 aaPredicted RBP8.64□□□□□ -1.03
PCM1-214ENST00000521338 CCDC102AQ96A19 550 aa8.64□□□□□ -1.03
PCM1-214ENST00000521338 NUDT12Q9BQG2 462 aa8.64□□□□□ -1.03
PCM1-214ENST00000521338 PCDHGC3Q9UN70 934 aa8.64□□□□□ -1.03
PCM1-214ENST00000521338 RETREG3Q86VR2 466 aa8.63□□□□□ -1.03
PCM1-214ENST00000521338 GPCPD1Q9NPB8 672 aa8.63□□□□□ -1.03
PCM1-214ENST00000521338 NXF1Q9UBU9 619 aaKnown RBP8.62□□□□□ -1.03
PCM1-214ENST00000521338 BMP1P13497 986 aa8.61□□□□□ -1.03
PCM1-214ENST00000521338 SH3BP2P78314 561 aa8.61□□□□□ -1.03
PCM1-214ENST00000521338 CLCN1P35523 988 aa8.6□□□□□ -1.03
PCM1-214ENST00000521338 EHBP1Q8NDI1 1231 aa8.6□□□□□ -1.03
PCM1-214ENST00000521338 CAPN5O15484 640 aaPredicted RBP8.59□□□□□ -1.03
PCM1-214ENST00000521338 FDX1P10109 184 aa8.58□□□□□ -1.04
PCM1-214ENST00000521338 GMPRP36959 345 aa8.58□□□□□ -1.04
PCM1-214ENST00000521338 NUTM1Q86Y26 1132 aa8.58□□□□□ -1.04
PCM1-214ENST00000521338 NPAS3Q8IXF0 933 aa8.58□□□□□ -1.04
PCM1-214ENST00000521338 SLC16A10Q8TF71 515 aa8.58□□□□□ -1.04
PCM1-214ENST00000521338 CCNYL3P0C7X3 344 aa8.57□□□□□ -1.04
PCM1-214ENST00000521338 EVA1BQ9NVM1 165 aa8.57□□□□□ -1.04
PCM1-214ENST00000521338 MS4A1P11836 297 aa8.56□□□□□ -1.04
PCM1-214ENST00000521338 WASF2Q9Y6W5 498 aa8.56□□□□□ -1.04
PCM1-214ENST00000521338 H3BM21 787 aa8.55□□□□□ -1.04
PCM1-214ENST00000521338 C6orf229H3BNL8 230 aa8.55□□□□□ -1.04
PCM1-214ENST00000521338 PTPRNQ16849 979 aa8.55□□□□□ -1.04
PCM1-214ENST00000521338 SPIRE2Q8WWL2 714 aa8.55□□□□□ -1.04
PCM1-214ENST00000521338 UNC93B1Q9H1C4 597 aa8.55□□□□□ -1.04
PCM1-214ENST00000521338 ERBB4Q15303 1308 aa8.54□□□□□ -1.04
PCM1-214ENST00000521338 VEGFBP49765 207 aa8.54□□□□□ -1.04
PCM1-214ENST00000521338 HAP1P54257 671 aaPredicted RBP8.54□□□□□ -1.04
PCM1-214ENST00000521338 MPNDQ8N594 471 aa8.54□□□□□ -1.04
PCM1-214ENST00000521338 BAP1Q92560 729 aa8.54□□□□□ -1.04
PCM1-214ENST00000521338 ZFP42Q96MM3 310 aa8.54□□□□□ -1.04
PCM1-214ENST00000521338 NDUFV2P19404 249 aa8.53□□□□□ -1.04
PCM1-214ENST00000521338 SSTR3P32745 418 aaPredicted RBP8.53□□□□□ -1.04
PCM1-214ENST00000521338 KCNH2Q12809 1159 aa8.53□□□□□ -1.04
PCM1-214ENST00000521338 IRF7Q92985 503 aa8.53□□□□□ -1.04
PCM1-214ENST00000521338 TLL2Q9Y6L7 1015 aa8.53□□□□□ -1.04
PCM1-214ENST00000521338 MOXD2PA6NHM9 499 aa8.52□□□□□ -1.05
PCM1-214ENST00000521338 LINC01559Q495D7 138 aa8.52□□□□□ -1.05
PCM1-214ENST00000521338 ZSCAN1Q8NBB4 408 aa8.52□□□□□ -1.05
PCM1-214ENST00000521338 DESI1Q6ICB0 168 aa8.51□□□□□ -1.05
PCM1-214ENST00000521338 ZNF511Q8NB15 262 aa8.51□□□□□ -1.05
PCM1-214ENST00000521338 KLF16Q9BXK1 252 aaPredicted RBP8.51□□□□□ -1.05
PCM1-214ENST00000521338 TULP1O00294 542 aaPredicted RBP8.5□□□□□ -1.05
PCM1-214ENST00000521338 VARSP26640 1264 aaKnown RBP8.5□□□□□ -1.05
PCM1-214ENST00000521338 PRR7Q8TB68 274 aa8.5□□□□□ -1.05
PCM1-214ENST00000521338 TIMP2P16035 220 aa8.49□□□□□ -1.05
PCM1-214ENST00000521338 NNTQ13423 1086 aa8.49□□□□□ -1.05
PCM1-214ENST00000521338 FAM181BA6NEQ2 426 aa8.48□□□□□ -1.05
PCM1-214ENST00000521338 MRPL14Q6P1L8 145 aaKnown RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms