RNA–Protein interactions for RNA: ENST00000521250.5

PTK2-230, Transcript of protein tyrosine kinase 2, humanhuman

TSL 4

Gene PTK2, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2-230ENST00000521250 HIRIP3Q9BW71 556 aaPredicted RBP13.37□□□□□ -0.27
PTK2-230ENST00000521250 ARHGEF28Q8N1W1 1705 aaKnown RBP13.36□□□□□ -0.27
PTK2-230ENST00000521250 SBNO2Q9Y2G9 1366 aa13.36□□□□□ -0.27
PTK2-230ENST00000521250 STRCP1A6NGW2 1772 aa13.36□□□□□ -0.27
PTK2-230ENST00000521250 LRRC7Q96NW7 1537 aa13.35□□□□□ -0.27
PTK2-230ENST00000521250 TMF1P82094 1093 aa13.34□□□□□ -0.27
PTK2-230ENST00000521250 C19orf44Q9H6X5 657 aa13.34□□□□□ -0.27
PTK2-230ENST00000521250 LTBP4Q8N2S1 1624 aa13.34□□□□□ -0.27
PTK2-230ENST00000521250 EVC2Q86UK5 1308 aa13.34□□□□□ -0.27
PTK2-230ENST00000521250 ADGRL3Q9HAR2 1447 aa13.33□□□□□ -0.28
PTK2-230ENST00000521250 WASLO00401 505 aaPredicted RBP13.32□□□□□ -0.28
PTK2-230ENST00000521250 CDCA8Q53HL2 280 aa13.32□□□□□ -0.28
PTK2-230ENST00000521250 MSH6P52701 1360 aa13.32□□□□□ -0.28
PTK2-230ENST00000521250 QRICH2Q9H0J4 1663 aa13.31□□□□□ -0.28
PTK2-230ENST00000521250 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.31□□□□□ -0.28
PTK2-230ENST00000521250 CDK19Q9BWU1 502 aa13.31□□□□□ -0.28
PTK2-230ENST00000521250 ATF3P18847 181 aa13.3□□□□□ -0.28
PTK2-230ENST00000521250 SRPK2P78362 688 aaKnown RBP13.3□□□□□ -0.28
PTK2-230ENST00000521250 PUS7Q96PZ0 661 aaKnown RBP13.3□□□□□ -0.28
PTK2-230ENST00000521250 CADPS2Q86UW7 1296 aa13.29□□□□□ -0.28
PTK2-230ENST00000521250 CABP2Q9NPB3 220 aa13.29□□□□□ -0.28
PTK2-230ENST00000521250 DISP3Q9P2K9 1392 aa13.29□□□□□ -0.28
PTK2-230ENST00000521250 ADGRB2O60241 1585 aa13.28□□□□□ -0.28
PTK2-230ENST00000521250 ZNF316A6NFI3 1004 aaPredicted RBP13.28□□□□□ -0.28
PTK2-230ENST00000521250 C11orf95C9JLR9 678 aaPredicted RBP13.28□□□□□ -0.28
PTK2-230ENST00000521250 CERKQ8TCT0 537 aa13.28□□□□□ -0.28
PTK2-230ENST00000521250 DCCP43146 1447 aa13.28□□□□□ -0.28
PTK2-230ENST00000521250 TULP4Q9NRJ4 1543 aa13.27□□□□□ -0.29
PTK2-230ENST00000521250 NUTM2FA1L443 756 aa13.26□□□□□ -0.29
PTK2-230ENST00000521250 CDC42BPGQ6DT37 1551 aa13.26□□□□□ -0.29
PTK2-230ENST00000521250 NALCNQ8IZF0 1738 aa13.26□□□□□ -0.29
PTK2-230ENST00000521250 NUDT16Q96DE0 195 aaKnown RBP13.26□□□□□ -0.29
PTK2-230ENST00000521250 POLR3GLQ9BT43 218 aa13.26□□□□□ -0.29
PTK2-230ENST00000521250 ATAD2Q6PL18 1390 aa13.25□□□□□ -0.29
PTK2-230ENST00000521250 KIF7Q2M1P5 1343 aa13.25□□□□□ -0.29
PTK2-230ENST00000521250 CCDC61Q9Y6R9 512 aa13.25□□□□□ -0.29
PTK2-230ENST00000521250 XIRP1Q702N8 1843 aaKnown RBP13.25□□□□□ -0.29
PTK2-230ENST00000521250 IQSEC2Q5JU85 1478 aa13.24□□□□□ -0.29
PTK2-230ENST00000521250 ANKARQ7Z5J8 1434 aa13.24□□□□□ -0.29
PTK2-230ENST00000521250 CCDC7Q96M83 1385 aa13.24□□□□□ -0.29
PTK2-230ENST00000521250 WASHC2AQ641Q2 1341 aa13.23□□□□□ -0.29
PTK2-230ENST00000521250 PRR36Q9H6K5 1346 aa13.23□□□□□ -0.29
PTK2-230ENST00000521250 TOM1O60784 492 aa13.23□□□□□ -0.29
PTK2-230ENST00000521250 SLAIN2Q9P270 581 aa13.23□□□□□ -0.29
PTK2-230ENST00000521250 TMC1Q8TDI8 760 aa13.22□□□□□ -0.29
PTK2-230ENST00000521250 C1orf167Q5SNV9 1468 aa13.22□□□□□ -0.29
PTK2-230ENST00000521250 FMN2Q9NZ56 1722 aa13.22□□□□□ -0.29
PTK2-230ENST00000521250 MST1RQ04912 1400 aa13.22□□□□□ -0.29
PTK2-230ENST00000521250 PLEKHG3A1L390 1219 aa13.21□□□□□ -0.29
PTK2-230ENST00000521250 ESCO1Q5FWF5 840 aa13.21□□□□□ -0.29
PTK2-230ENST00000521250 CABP1Q9NZU7 370 aa13.21□□□□□ -0.29
PTK2-230ENST00000521250 NINLQ9Y2I6 1382 aa13.2□□□□□ -0.3
PTK2-230ENST00000521250 SLC12A5Q9H2X9 1139 aa13.2□□□□□ -0.3
PTK2-230ENST00000521250 PHF8Q9UPP1 1060 aa13.2□□□□□ -0.3
PTK2-230ENST00000521250 ATP7BP35670 1465 aa13.2□□□□□ -0.3
PTK2-230ENST00000521250 UBAP1LF5GYI3 381 aa13.19□□□□□ -0.3
PTK2-230ENST00000521250 ORAI2Q96SN7 254 aa13.19□□□□□ -0.3
PTK2-230ENST00000521250 PPIP5K1Q6PFW1 1433 aa13.19□□□□□ -0.3
PTK2-230ENST00000521250 PMFBP1Q8TBY8 1022 aa13.18□□□□□ -0.3
PTK2-230ENST00000521250 TERF2IPQ9NYB0 399 aa13.18□□□□□ -0.3
PTK2-230ENST00000521250 BRINP3Q76B58 766 aa13.17□□□□□ -0.3
PTK2-230ENST00000521250 HDGFL2Q7Z4V5 671 aaPredicted RBP13.17□□□□□ -0.3
PTK2-230ENST00000521250 NGDNQ8NEJ9 315 aaKnown RBP13.17□□□□□ -0.3
PTK2-230ENST00000521250 ZNF692Q9BU19 519 aaPredicted RBP13.17□□□□□ -0.3
PTK2-230ENST00000521250 USP32Q8NFA0 1604 aa13.17□□□□□ -0.3
PTK2-230ENST00000521250 ACEP12821 1306 aa13.16□□□□□ -0.3
PTK2-230ENST00000521250 DDX10Q13206 875 aaKnown RBP13.15□□□□□ -0.3
PTK2-230ENST00000521250 PANK3Q9H999 370 aa13.15□□□□□ -0.3
PTK2-230ENST00000521250 FOXO3O43524 673 aa13.14□□□□□ -0.31
PTK2-230ENST00000521250 PIP4K2BP78356 416 aa13.14□□□□□ -0.31
PTK2-230ENST00000521250 PSME1Q06323 249 aa13.14□□□□□ -0.31
PTK2-230ENST00000521250 POLR3AO14802 1390 aaPredicted RBP13.14□□□□□ -0.31
PTK2-230ENST00000521250 ANKRD36BQ8N2N9 1353 aa13.14□□□□□ -0.31
PTK2-230ENST00000521250 ITSN1Q15811 1721 aa13.13□□□□□ -0.31
PTK2-230ENST00000521250 RGPD8O14715 1765 aaPredicted RBP13.13□□□□□ -0.31
PTK2-230ENST00000521250 TOPAZ1Q8N9V7 1692 aa13.13□□□□□ -0.31
PTK2-230ENST00000521250 CPSF1Q10570 1443 aaKnown RBP13.13□□□□□ -0.31
PTK2-230ENST00000521250 NPHP3Q7Z494 1330 aa13.13□□□□□ -0.31
PTK2-230ENST00000521250 SCAF1Q9H7N4 1312 aaKnown RBP13.13□□□□□ -0.31
PTK2-230ENST00000521250 A0A1W2PP64 1363 aa13.12□□□□□ -0.31
PTK2-230ENST00000521250 KTN1Q86UP2 1357 aaKnown RBP13.12□□□□□ -0.31
PTK2-230ENST00000521250 KRT28Q7Z3Y7 464 aa13.12□□□□□ -0.31
PTK2-230ENST00000521250 CD163L1Q9NR16 1453 aa13.11□□□□□ -0.31
PTK2-230ENST00000521250 CARD14Q9BXL6 1004 aa13.11□□□□□ -0.31
PTK2-230ENST00000521250 KIF1AQ12756 1690 aa13.11□□□□□ -0.31
PTK2-230ENST00000521250 BRD4O60885 1362 aaPredicted RBP13.1□□□□□ -0.31
PTK2-230ENST00000521250 MYOM1P52179 1685 aa13.1□□□□□ -0.31
PTK2-230ENST00000521250 DDX17Q92841 729 aaKnown RBP13.1□□□□□ -0.31
PTK2-230ENST00000521250 USP6P35125 1406 aa13.09□□□□□ -0.31
PTK2-230ENST00000521250 XPCQ01831 940 aaPredicted RBP13.09□□□□□ -0.31
PTK2-230ENST00000521250 KNSTRNQ9Y448 316 aa13.09□□□□□ -0.31
PTK2-230ENST00000521250 EDC4Q6P2E9 1401 aaKnown RBP13.08□□□□□ -0.32
PTK2-230ENST00000521250 PER1O15534 1290 aaPredicted RBP13.08□□□□□ -0.32
PTK2-230ENST00000521250 SOS2Q07890 1332 aaPredicted RBP13.08□□□□□ -0.32
PTK2-230ENST00000521250 TTC21BQ7Z4L5 1316 aa13.08□□□□□ -0.32
PTK2-230ENST00000521250 NSD3Q9BZ95 1437 aa13.07□□□□□ -0.32
PTK2-230ENST00000521250 PAK3O75914 559 aaPredicted RBP13.07□□□□□ -0.32
PTK2-230ENST00000521250 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.07□□□□□ -0.322e-6■■□□□ 12.5
PTK2-230ENST00000521250 ROBO1Q9Y6N7 1651 aa13.07□□□□□ -0.32
PTK2-230ENST00000521250 CGNL1Q0VF96 1302 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms