RNA–Protein interactions for RNA: ENST00000521046.1

PCMTD1-205, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

TSL 2

Gene PCMTD1, Length 856 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-205ENST00000521046 AHDC1Q5TGY3 1603 aaPredicted RBP25.64■■□□□ 1.7
PCMTD1-205ENST00000521046 KIAA1210Q9ULL0 1709 aa25.64■■□□□ 1.7
PCMTD1-205ENST00000521046 TRAK1Q9UPV9 953 aa25.64■■□□□ 1.7
PCMTD1-205ENST00000521046 POGKQ9P215 609 aa25.63■■□□□ 1.69
PCMTD1-205ENST00000521046 PCGF6Q9BYE7 350 aa25.62■■□□□ 1.69
PCMTD1-205ENST00000521046 PHLPP1O60346 1717 aa25.61■■□□□ 1.69
PCMTD1-205ENST00000521046 COL16A1Q07092 1604 aaPredicted RBP25.59■■□□□ 1.69
PCMTD1-205ENST00000521046 NBPF1Q3BBV0 1214 aa25.58■■□□□ 1.69
PCMTD1-205ENST00000521046 ORAI2Q96SN7 254 aa25.58■■□□□ 1.69
PCMTD1-205ENST00000521046 JCADQ9P266 1359 aa25.57■■□□□ 1.68
PCMTD1-205ENST00000521046 SAFB2Q14151 953 aaKnown RBP eCLIP25.57■■□□□ 1.68
PCMTD1-205ENST00000521046 DISP3Q9P2K9 1392 aa25.56■■□□□ 1.68
PCMTD1-205ENST00000521046 NHSL1Q5SYE7 1610 aa25.55■■□□□ 1.68
PCMTD1-205ENST00000521046 MED1Q15648 1581 aaPredicted RBP25.53■■□□□ 1.68
PCMTD1-205ENST00000521046 ESCO1Q5FWF5 840 aa25.53■■□□□ 1.68
PCMTD1-205ENST00000521046 FMN2Q9NZ56 1722 aa25.52■■□□□ 1.68
PCMTD1-205ENST00000521046 TONSLQ96HA7 1378 aa25.52■■□□□ 1.68
PCMTD1-205ENST00000521046 ADGRB2O60241 1585 aa25.52■■□□□ 1.68
PCMTD1-205ENST00000521046 LRRC59Q96AG4 307 aaKnown RBP25.51■■□□□ 1.67
PCMTD1-205ENST00000521046 NUTM2FA1L443 756 aa25.5■■□□□ 1.67
PCMTD1-205ENST00000521046 SOS2Q07890 1332 aaPredicted RBP25.5■■□□□ 1.67
PCMTD1-205ENST00000521046 DDX17Q92841 729 aaKnown RBP25.5■■□□□ 1.67
PCMTD1-205ENST00000521046 ARHGEF28Q8N1W1 1705 aaKnown RBP25.49■■□□□ 1.67
PCMTD1-205ENST00000521046 MINK1Q8N4C8 1332 aaPredicted RBP25.49■■□□□ 1.67
PCMTD1-205ENST00000521046 CLSPNQ9HAW4 1339 aa25.49■■□□□ 1.67
PCMTD1-205ENST00000521046 ANKARQ7Z5J8 1434 aa25.47■■□□□ 1.67
PCMTD1-205ENST00000521046 SPATA31A6Q5VVP1 1343 aa25.47■■□□□ 1.67
PCMTD1-205ENST00000521046 NPHP3Q7Z494 1330 aa25.47■■□□□ 1.67
PCMTD1-205ENST00000521046 WASLO00401 505 aaPredicted RBP25.47■■□□□ 1.67
PCMTD1-205ENST00000521046 NBPF8Q3BBV2 869 aa25.47■■□□□ 1.67
PCMTD1-205ENST00000521046 HIRIP3Q9BW71 556 aaPredicted RBP25.47■■□□□ 1.67
PCMTD1-205ENST00000521046 TRPM1Q7Z4N2 1603 aa25.47■■□□□ 1.67
PCMTD1-205ENST00000521046 EIF3AQ14152 1382 aaKnown RBP25.46■■□□□ 1.67
PCMTD1-205ENST00000521046 FOXO3O43524 673 aa25.44■■□□□ 1.66
PCMTD1-205ENST00000521046 SHPRHQ149N8 1683 aa25.44■■□□□ 1.66
PCMTD1-205ENST00000521046 ROCK2O75116 1388 aaKnown RBP25.44■■□□□ 1.66
PCMTD1-205ENST00000521046 GPRASP1Q5JY77 1395 aa25.43■■□□□ 1.66
PCMTD1-205ENST00000521046 PHF8Q9UPP1 1060 aa25.42■■□□□ 1.66
PCMTD1-205ENST00000521046 CENPJQ9HC77 1338 aaPredicted RBP25.41■■□□□ 1.66
PCMTD1-205ENST00000521046 KIF1AQ12756 1690 aa25.4■■□□□ 1.66
PCMTD1-205ENST00000521046 PXDNQ92626 1479 aa25.4■■□□□ 1.66
PCMTD1-205ENST00000521046 TULP4Q9NRJ4 1543 aa25.39■■□□□ 1.66
PCMTD1-205ENST00000521046 PHF23Q9BUL5 403 aaPredicted RBP25.39■■□□□ 1.66
PCMTD1-205ENST00000521046 TIMELESSQ9UNS1 1208 aa25.39■■□□□ 1.66
PCMTD1-205ENST00000521046 PNPLA6Q8IY17 1366 aa25.39■■□□□ 1.65
PCMTD1-205ENST00000521046 PRR36Q9H6K5 1346 aa25.37■■□□□ 1.65
PCMTD1-205ENST00000521046 USP32Q8NFA0 1604 aa25.37■■□□□ 1.65
PCMTD1-205ENST00000521046 CDK19Q9BWU1 502 aa25.36■■□□□ 1.65
PCMTD1-205ENST00000521046 RGPD8O14715 1765 aaPredicted RBP25.36■■□□□ 1.65
PCMTD1-205ENST00000521046 RALGAPBQ86X10 1494 aa25.35■■□□□ 1.65
PCMTD1-205ENST00000521046 KRT28Q7Z3Y7 464 aa25.34■■□□□ 1.65
PCMTD1-205ENST00000521046 NUDT16Q96DE0 195 aaKnown RBP25.34■■□□□ 1.65
PCMTD1-205ENST00000521046 LRP6O75581 1613 aa25.34■■□□□ 1.65
PCMTD1-205ENST00000521046 XPCQ01831 940 aaPredicted RBP25.33■■□□□ 1.65
PCMTD1-205ENST00000521046 CARD11Q9BXL7 1154 aa25.33■■□□□ 1.65
PCMTD1-205ENST00000521046 PSME1Q06323 249 aa25.32■■□□□ 1.64
PCMTD1-205ENST00000521046 PMFBP1Q8TBY8 1022 aa25.32■■□□□ 1.64
PCMTD1-205ENST00000521046 RGS17Q9UGC6 210 aaPredicted RBP25.32■■□□□ 1.64
PCMTD1-205ENST00000521046 ILDR2Q71H61 639 aa25.31■■□□□ 1.64
PCMTD1-205ENST00000521046 ATP7BP35670 1465 aa25.31■■□□□ 1.64
PCMTD1-205ENST00000521046 SPATA31A3Q5VYP0 1347 aa25.31■■□□□ 1.64
PCMTD1-205ENST00000521046 CCDC61Q9Y6R9 512 aa25.3■■□□□ 1.64
PCMTD1-205ENST00000521046 NUTM2BA6NNL0 878 aaPredicted RBP25.29■■□□□ 1.64
PCMTD1-205ENST00000521046 NUTM2EB1AL46 878 aaPredicted RBP25.29■■□□□ 1.64
PCMTD1-205ENST00000521046 NUTM2AQ8IVF1 878 aaPredicted RBP25.29■■□□□ 1.64
PCMTD1-205ENST00000521046 CCER1Q8TC90 406 aaPredicted RBP25.29■■□□□ 1.64
PCMTD1-205ENST00000521046 SBNO1A3KN83 1393 aa25.29■■□□□ 1.64
PCMTD1-205ENST00000521046 MEX3CQ5U5Q3 659 aaKnown RBP25.28■■□□□ 1.64
PCMTD1-205ENST00000521046 QRICH2Q9H0J4 1663 aa25.27■■□□□ 1.64
PCMTD1-205ENST00000521046 COL22A1Q8NFW1 1626 aaPredicted RBP25.26■■□□□ 1.63
PCMTD1-205ENST00000521046 PLEKHG3A1L390 1219 aa25.25■■□□□ 1.63
PCMTD1-205ENST00000521046 SRPK2P78362 688 aaKnown RBP25.25■■□□□ 1.63
PCMTD1-205ENST00000521046 NGDNQ8NEJ9 315 aaKnown RBP25.25■■□□□ 1.63
PCMTD1-205ENST00000521046 EVC2Q86UK5 1308 aa25.25■■□□□ 1.63
PCMTD1-205ENST00000521046 SBNO2Q9Y2G9 1366 aa25.25■■□□□ 1.63
PCMTD1-205ENST00000521046 ITSN1Q15811 1721 aa25.23■■□□□ 1.63
PCMTD1-205ENST00000521046 TNS3Q68CZ2 1445 aa25.23■■□□□ 1.63
PCMTD1-205ENST00000521046 CABP2Q9NPB3 220 aa25.22■■□□□ 1.63
PCMTD1-205ENST00000521046 POLR3AO14802 1390 aaPredicted RBP25.21■■□□□ 1.63
PCMTD1-205ENST00000521046 ARHGEF10O15013 1369 aa25.2■■□□□ 1.63
PCMTD1-205ENST00000521046 TOPAZ1Q8N9V7 1692 aa25.2■■□□□ 1.62
PCMTD1-205ENST00000521046 ZNF772Q68DY9 489 aaPredicted RBP25.19■■□□□ 1.62
PCMTD1-205ENST00000521046 ACEP12821 1306 aa25.18■■□□□ 1.62
PCMTD1-205ENST00000521046 ADAMTS2O95450 1211 aa25.18■■□□□ 1.62
PCMTD1-205ENST00000521046 POTEAQ6S8J7 498 aa25.18■■□□□ 1.62
PCMTD1-205ENST00000521046 PPIP5K1Q6PFW1 1433 aa25.16■■□□□ 1.62
PCMTD1-205ENST00000521046 TRPM3Q9HCF6 1732 aaPredicted RBP25.16■■□□□ 1.62
PCMTD1-205ENST00000521046 C8orf37Q96NL8 207 aa25.15■■□□□ 1.62
PCMTD1-205ENST00000521046 AFF2P51816 1311 aa25.14■■□□□ 1.62
PCMTD1-205ENST00000521046 SLC24A1O60721 1099 aa25.14■■□□□ 1.62
PCMTD1-205ENST00000521046 LMOD2Q6P5Q4 547 aa25.14■■□□□ 1.62
PCMTD1-205ENST00000521046 NGLY1Q96IV0 654 aa25.14■■□□□ 1.62
PCMTD1-205ENST00000521046 CABP1Q9NZU7 370 aa25.14■■□□□ 1.62
PCMTD1-205ENST00000521046 FNBP4Q8N3X1 1017 aaPredicted RBP25.12■■□□□ 1.61
PCMTD1-205ENST00000521046 BRD4O60885 1362 aaPredicted RBP25.11■■□□□ 1.61
PCMTD1-205ENST00000521046 ATAD2Q6PL18 1390 aa25.11■■□□□ 1.61
PCMTD1-205ENST00000521046 ST20-MTHFSA0A0A6YYL1 179 aa25.11■■□□□ 1.61
PCMTD1-205ENST00000521046 PUS7Q96PZ0 661 aaKnown RBP25.11■■□□□ 1.61
PCMTD1-205ENST00000521046 ALS2Q96Q42 1657 aa25.1■■□□□ 1.61
PCMTD1-205ENST00000521046 PAK3O75914 559 aaPredicted RBP25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms