RNA–Protein interactions for RNA: ENST00000520952.1

CDH17-204, Transcript of cadherin 17, humanhuman

TSL 4

Gene CDH17, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17-204ENST00000520952 NUTM2FA1L443 756 aa13.67□□□□□ -0.22
CDH17-204ENST00000520952 ESCO1Q5FWF5 840 aa13.67□□□□□ -0.22
CDH17-204ENST00000520952 RBM6P78332 1123 aaKnown RBP13.66□□□□□ -0.22
CDH17-204ENST00000520952 XPCQ01831 940 aaPredicted RBP13.66□□□□□ -0.22
CDH17-204ENST00000520952 FOXO3O43524 673 aa13.65□□□□□ -0.22
CDH17-204ENST00000520952 RGS12O14924 1447 aa13.64□□□□□ -0.23
CDH17-204ENST00000520952 SPATA31E1Q6ZUB1 1445 aa13.64□□□□□ -0.23
CDH17-204ENST00000520952 PRAG1Q86YV5 1406 aa13.64□□□□□ -0.23
CDH17-204ENST00000520952 CDK12Q9NYV4 1490 aaPredicted RBP13.63□□□□□ -0.23
CDH17-204ENST00000520952 PLEKHH1Q9ULM0 1364 aa13.63□□□□□ -0.23
CDH17-204ENST00000520952 USP21Q9UK80 565 aa13.63□□□□□ -0.23
CDH17-204ENST00000520952 LAMC1P11047 1609 aa13.63□□□□□ -0.23
CDH17-204ENST00000520952 CCDC144AA2RUR9 1427 aa13.63□□□□□ -0.23
CDH17-204ENST00000520952 FNBP4Q8N3X1 1017 aaPredicted RBP13.61□□□□□ -0.23
CDH17-204ENST00000520952 LRPPRCP42704 1394 aaKnown RBP13.6□□□□□ -0.23
CDH17-204ENST00000520952 NPHP3Q7Z494 1330 aa13.6□□□□□ -0.23
CDH17-204ENST00000520952 ABCC11Q96J66 1382 aa13.59□□□□□ -0.23
CDH17-204ENST00000520952 ANKRD30BQ9BXX2 1392 aa13.59□□□□□ -0.23
CDH17-204ENST00000520952 TRPC5Q9UL62 973 aaPredicted RBP13.59□□□□□ -0.23
CDH17-204ENST00000520952 CFAP70Q5T0N1 1121 aa13.58□□□□□ -0.24
CDH17-204ENST00000520952 PXDNQ92626 1479 aa13.58□□□□□ -0.24
CDH17-204ENST00000520952 TECPR2O15040 1411 aa13.57□□□□□ -0.24
CDH17-204ENST00000520952 C14orf93Q9H972 538 aaKnown RBP13.57□□□□□ -0.24
CDH17-204ENST00000520952 CDC42BPGQ6DT37 1551 aa13.57□□□□□ -0.24
CDH17-204ENST00000520952 SRCAPQ6ZRS2 3230 aa13.56□□□□□ -0.24
CDH17-204ENST00000520952 PIK3C2GO75747 1445 aa13.56□□□□□ -0.24
CDH17-204ENST00000520952 IFT172Q9UG01 1749 aa13.56□□□□□ -0.24
CDH17-204ENST00000520952 MYOM2P54296 1465 aa13.56□□□□□ -0.24
CDH17-204ENST00000520952 PLEKHG5O94827 1062 aa13.56□□□□□ -0.24
CDH17-204ENST00000520952 SAFB2Q14151 953 aaKnown RBP eCLIP13.56□□□□□ -0.24
CDH17-204ENST00000520952 ATRNO75882 1429 aa13.56□□□□□ -0.24
CDH17-204ENST00000520952 YTHDC2Q9H6S0 1430 aaKnown RBP13.56□□□□□ -0.24
CDH17-204ENST00000520952 BCL9LQ86UU0 1499 aa13.55□□□□□ -0.24
CDH17-204ENST00000520952 COL22A1Q8NFW1 1626 aaPredicted RBP13.55□□□□□ -0.24
CDH17-204ENST00000520952 KRT28Q7Z3Y7 464 aa13.55□□□□□ -0.24
CDH17-204ENST00000520952 MSH5O43196 834 aa13.54□□□□□ -0.24
CDH17-204ENST00000520952 SPATA31A3Q5VYP0 1347 aa13.54□□□□□ -0.24
CDH17-204ENST00000520952 EP400Q96L91 3159 aa13.53□□□□□ -0.24
CDH17-204ENST00000520952 CABLES1Q8TDN4 633 aa13.53□□□□□ -0.24
CDH17-204ENST00000520952 SIRT1Q96EB6 747 aa13.53□□□□□ -0.24
CDH17-204ENST00000520952 GJD4Q96KN9 370 aaPredicted RBP13.52□□□□□ -0.25
CDH17-204ENST00000520952 PRAM1Q96QH2 718 aa13.52□□□□□ -0.25
CDH17-204ENST00000520952 PHF8Q9UPP1 1060 aa13.52□□□□□ -0.25
CDH17-204ENST00000520952 RGPD8O14715 1765 aaPredicted RBP13.51□□□□□ -0.25
CDH17-204ENST00000520952 DHX57Q6P158 1386 aaKnown RBP13.51□□□□□ -0.25
CDH17-204ENST00000520952 ATAD2Q6PL18 1390 aa13.51□□□□□ -0.25
CDH17-204ENST00000520952 KNDC1Q76NI1 1749 aa13.5□□□□□ -0.25
CDH17-204ENST00000520952 FMN2Q9NZ56 1722 aa13.5□□□□□ -0.25
CDH17-204ENST00000520952 UNC5CLQ8IV45 518 aa13.5□□□□□ -0.25
CDH17-204ENST00000520952 RAB3GAP2Q9H2M9 1393 aa13.49□□□□□ -0.25
CDH17-204ENST00000520952 LMOD2Q6P5Q4 547 aa13.49□□□□□ -0.25
CDH17-204ENST00000520952 PMFBP1Q8TBY8 1022 aa13.49□□□□□ -0.25
CDH17-204ENST00000520952 POGKQ9P215 609 aa13.49□□□□□ -0.25
CDH17-204ENST00000520952 KDM2AQ9Y2K7 1162 aa13.49□□□□□ -0.25
CDH17-204ENST00000520952 MARF1Q9Y4F3 1742 aaKnown RBP13.49□□□□□ -0.25
CDH17-204ENST00000520952 NRXN1Q9ULB1 1477 aa13.48□□□□□ -0.25
CDH17-204ENST00000520952 PSME1Q06323 249 aa13.48□□□□□ -0.25
CDH17-204ENST00000520952 HIRIP3Q9BW71 556 aaPredicted RBP13.48□□□□□ -0.25
CDH17-204ENST00000520952 TRAK1Q9UPV9 953 aa13.48□□□□□ -0.25
CDH17-204ENST00000520952 SLIT2O94813 1529 aa13.46□□□□□ -0.25
CDH17-204ENST00000520952 HAP1P54257 671 aaPredicted RBP13.46□□□□□ -0.25
CDH17-204ENST00000520952 MINK1Q8N4C8 1332 aaPredicted RBP13.45□□□□□ -0.26
CDH17-204ENST00000520952 KIF1AQ12756 1690 aa13.45□□□□□ -0.26
CDH17-204ENST00000520952 RALGAPBQ86X10 1494 aa13.45□□□□□ -0.26
CDH17-204ENST00000520952 FAM83GA6ND36 823 aa13.45□□□□□ -0.26
CDH17-204ENST00000520952 DCAF11Q8TEB1 546 aa13.45□□□□□ -0.26
CDH17-204ENST00000520952 GLI3P10071 1580 aa13.45□□□□□ -0.26
CDH17-204ENST00000520952 ACIN1Q9UKV3 1341 aaKnown RBP13.44□□□□□ -0.26
CDH17-204ENST00000520952 TNS3Q68CZ2 1445 aa13.44□□□□□ -0.26
CDH17-204ENST00000520952 SBNO1A3KN83 1393 aa13.44□□□□□ -0.26
CDH17-204ENST00000520952 PRR36Q9H6K5 1346 aa13.43□□□□□ -0.26
CDH17-204ENST00000520952 SEPT12Q8IYM1 358 aa13.43□□□□□ -0.26
CDH17-204ENST00000520952 VPS72Q15906 364 aa13.42□□□□□ -0.26
CDH17-204ENST00000520952 CCDC125Q86Z20 511 aa13.42□□□□□ -0.26
CDH17-204ENST00000520952 ZRANB1Q9UGI0 708 aa13.42□□□□□ -0.26
CDH17-204ENST00000520952 CCDC9Q9Y3X0 531 aaKnown RBP13.42□□□□□ -0.26
CDH17-204ENST00000520952 USP32Q8NFA0 1604 aa13.42□□□□□ -0.26
CDH17-204ENST00000520952 ADGRB1O14514 1584 aa13.41□□□□□ -0.26
CDH17-204ENST00000520952 DEFB132Q7Z7B7 95 aa13.41□□□□□ -0.26
CDH17-204ENST00000520952 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.41□□□□□ -0.26
CDH17-204ENST00000520952 DLC1Q96QB1 1528 aa13.4□□□□□ -0.26
CDH17-204ENST00000520952 WASLO00401 505 aaPredicted RBP13.4□□□□□ -0.26
CDH17-204ENST00000520952 ONECUT3O60422 494 aaPredicted RBP13.4□□□□□ -0.26
CDH17-204ENST00000520952 BRWD3Q6RI45 1802 aa13.4□□□□□ -0.26
CDH17-204ENST00000520952 ARHGEF10O15013 1369 aa13.39□□□□□ -0.27
CDH17-204ENST00000520952 ANKARQ7Z5J8 1434 aa13.39□□□□□ -0.27
CDH17-204ENST00000520952 BTG4Q9NY30 223 aa13.38□□□□□ -0.27
CDH17-204ENST00000520952 PAK3O75914 559 aaPredicted RBP13.37□□□□□ -0.27
CDH17-204ENST00000520952 FAM98CQ17RN3 349 aaKnown RBP13.37□□□□□ -0.27
CDH17-204ENST00000520952 KRT27Q7Z3Y8 459 aa13.37□□□□□ -0.27
CDH17-204ENST00000520952 NGDNQ8NEJ9 315 aaKnown RBP13.37□□□□□ -0.27
CDH17-204ENST00000520952 PLCH1Q4KWH8 1693 aa13.37□□□□□ -0.27
CDH17-204ENST00000520952 ABCA3Q99758 1704 aa13.36□□□□□ -0.27
CDH17-204ENST00000520952 GPRASP1Q5JY77 1395 aa13.36□□□□□ -0.27
CDH17-204ENST00000520952 BLMP54132 1417 aaPredicted RBP13.36□□□□□ -0.27
CDH17-204ENST00000520952 ADGRB2O60241 1585 aa13.36□□□□□ -0.27
CDH17-204ENST00000520952 TRPM3Q9HCF6 1732 aaPredicted RBP13.36□□□□□ -0.27
CDH17-204ENST00000520952 A0A0G2JS52 829 aa13.35□□□□□ -0.27
CDH17-204ENST00000520952 MYT1Q01538 1121 aa13.35□□□□□ -0.27
CDH17-204ENST00000520952 FAM182BQ5T319 152 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms