RNA–Protein interactions for RNA: ENST00000520549.1

IRGM-201, Transcript of immunity related GTPase M, humanhuman

TSL 1 (best)

Gene IRGM, Length 503 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRGM-201ENST00000520549 RNF19BQ6ZMZ0 732 aa13.98□□□□□ -0.17
IRGM-201ENST00000520549 PHOX2BQ99453 314 aa13.98□□□□□ -0.17
IRGM-201ENST00000520549 WFS1O76024 890 aa13.94□□□□□ -0.18
IRGM-201ENST00000520549 WNT7AO00755 349 aa13.92□□□□□ -0.18
IRGM-201ENST00000520549 Q3C1V9 767 aa13.91□□□□□ -0.18
IRGM-201ENST00000520549 SNIP1Q8TAD8 396 aaKnown RBP13.91□□□□□ -0.18
IRGM-201ENST00000520549 TRIM32Q13049 653 aa13.9□□□□□ -0.18
IRGM-201ENST00000520549 GPIHBP1Q8IV16 184 aa13.9□□□□□ -0.18
IRGM-201ENST00000520549 SMPD1P17405 629 aa13.89□□□□□ -0.19
IRGM-201ENST00000520549 MMP16P51512 607 aa13.88□□□□□ -0.19
IRGM-201ENST00000520549 NFX1Q12986 1120 aaKnown RBP13.86□□□□□ -0.19
IRGM-201ENST00000520549 MRGPRX2Q96LB1 330 aa13.86□□□□□ -0.19
IRGM-201ENST00000520549 ATP13A2Q9NQ11 1180 aa13.85□□□□□ -0.19
IRGM-201ENST00000520549 CD46P15529 392 aa13.84□□□□□ -0.19
IRGM-201ENST00000520549 USB1Q9BQ65 265 aaKnown RBP13.84□□□□□ -0.19
IRGM-201ENST00000520549 J3QL48 77 aa13.83□□□□□ -0.2
IRGM-201ENST00000520549 REPIN1Q9BWE0 567 aaKnown RBP13.82□□□□□ -0.2
IRGM-201ENST00000520549 KDM4AO75164 1064 aa13.81□□□□□ -0.2
IRGM-201ENST00000520549 DXOO77932 396 aaKnown RBP13.81□□□□□ -0.2
IRGM-201ENST00000520549 SENP2Q9HC62 589 aa13.8□□□□□ -0.2
IRGM-201ENST00000520549 SNRPBP14678 240 aaKnown RBP13.79□□□□□ -0.2
IRGM-201ENST00000520549 CCDC24Q8N4L8 307 aa13.79□□□□□ -0.2
IRGM-201ENST00000520549 WIPF1O43516 503 aa13.78□□□□□ -0.2
IRGM-201ENST00000520549 TRIM47Q96LD4 638 aa13.78□□□□□ -0.2
IRGM-201ENST00000520549 INSM1Q01101 510 aaPredicted RBP13.77□□□□□ -0.21
IRGM-201ENST00000520549 HPS1Q92902 700 aa13.77□□□□□ -0.21
IRGM-201ENST00000520549 STK17AQ9UEE5 414 aa13.77□□□□□ -0.21
IRGM-201ENST00000520549 USP46P62068 366 aa13.76□□□□□ -0.21
IRGM-201ENST00000520549 MAP2K5Q13163 448 aa13.75□□□□□ -0.21
IRGM-201ENST00000520549 TERTO14746 1132 aaKnown RBP13.74□□□□□ -0.21
IRGM-201ENST00000520549 PLCB2Q00722 1185 aa13.74□□□□□ -0.21
IRGM-201ENST00000520549 RC3H1Q5TC82 1133 aaKnown RBP13.74□□□□□ -0.21
IRGM-201ENST00000520549 HLA-CQ95604 372 aa13.74□□□□□ -0.21
IRGM-201ENST00000520549 WNT7BP56706 349 aa13.73□□□□□ -0.21
IRGM-201ENST00000520549 KIFC2Q96AC6 838 aa13.73□□□□□ -0.21
IRGM-201ENST00000520549 SKOR1P84550 965 aa13.72□□□□□ -0.21
IRGM-201ENST00000520549 HOXA2O43364 376 aa13.71□□□□□ -0.21
IRGM-201ENST00000520549 MDM2Q00987 491 aaPredicted RBP13.71□□□□□ -0.21
IRGM-201ENST00000520549 IRF6O14896 467 aa13.68□□□□□ -0.22
IRGM-201ENST00000520549 LCE2CQ5TA81 110 aa13.68□□□□□ -0.22
IRGM-201ENST00000520549 ALDH1A1P00352 501 aa13.67□□□□□ -0.22
IRGM-201ENST00000520549 JUNDP17535 347 aa13.67□□□□□ -0.22
IRGM-201ENST00000520549 GUCA2AQ02747 115 aa13.65□□□□□ -0.22
IRGM-201ENST00000520549 MINK1Q8N4C8 1332 aaPredicted RBP13.63□□□□□ -0.23
IRGM-201ENST00000520549 SYMPKQ92797 1274 aaKnown RBP13.62□□□□□ -0.23
IRGM-201ENST00000520549 TULP1O00294 542 aaPredicted RBP13.61□□□□□ -0.23
IRGM-201ENST00000520549 NUDT12Q9BQG2 462 aa13.61□□□□□ -0.23
IRGM-201ENST00000520549 RETREG3Q86VR2 466 aa13.6□□□□□ -0.23
IRGM-201ENST00000520549 EHBP1Q8NDI1 1231 aa13.6□□□□□ -0.23
IRGM-201ENST00000520549 GPCPD1Q9NPB8 672 aa13.6□□□□□ -0.23
IRGM-201ENST00000520549 NUTM1Q86Y26 1132 aa13.59□□□□□ -0.23
IRGM-201ENST00000520549 SLC16A10Q8TF71 515 aa13.59□□□□□ -0.23
IRGM-201ENST00000520549 CCDC102AQ96A19 550 aa13.59□□□□□ -0.23
IRGM-201ENST00000520549 CLCN1P35523 988 aa13.58□□□□□ -0.24
IRGM-201ENST00000520549 PTCRAQ6ISU1 281 aaPredicted RBP13.58□□□□□ -0.24
IRGM-201ENST00000520549 WASF2Q9Y6W5 498 aa13.58□□□□□ -0.24
IRGM-201ENST00000520549 SIAH2O43255 324 aa13.57□□□□□ -0.24
IRGM-201ENST00000520549 FAM217BQ9NTX9 383 aaPredicted RBP13.57□□□□□ -0.24
IRGM-201ENST00000520549 BMP1P13497 986 aa13.56□□□□□ -0.24
IRGM-201ENST00000520549 NXF1Q9UBU9 619 aaKnown RBP13.56□□□□□ -0.24
IRGM-201ENST00000520549 CAPN5O15484 640 aaPredicted RBP13.55□□□□□ -0.24
IRGM-201ENST00000520549 HAP1P54257 671 aaPredicted RBP13.55□□□□□ -0.24
IRGM-201ENST00000520549 TRIM46Q7Z4K8 759 aa13.53□□□□□ -0.24
IRGM-201ENST00000520549 KRI1Q8N9T8 703 aaKnown RBP13.53□□□□□ -0.24
IRGM-201ENST00000520549 C6orf229H3BNL8 230 aa13.52□□□□□ -0.25
IRGM-201ENST00000520549 CCNYL3P0C7X3 344 aa13.51□□□□□ -0.25
IRGM-201ENST00000520549 FDX1P10109 184 aa13.51□□□□□ -0.25
IRGM-201ENST00000520549 SH3BP2P78314 561 aa13.51□□□□□ -0.25
IRGM-201ENST00000520549 FAM181BA6NEQ2 426 aa13.5□□□□□ -0.25
IRGM-201ENST00000520549 MS4A1P11836 297 aa13.5□□□□□ -0.25
IRGM-201ENST00000520549 KDM2AQ9Y2K7 1162 aa13.5□□□□□ -0.25
IRGM-201ENST00000520549 NPAS3Q8IXF0 933 aa13.49□□□□□ -0.25
IRGM-201ENST00000520549 PCDHGC3Q9UN70 934 aa13.49□□□□□ -0.25
IRGM-201ENST00000520549 GMPRP36959 345 aa13.48□□□□□ -0.25
IRGM-201ENST00000520549 IRF7Q92985 503 aa13.48□□□□□ -0.25
IRGM-201ENST00000520549 PTPRNQ16849 979 aa13.46□□□□□ -0.25
IRGM-201ENST00000520549 UNC93B1Q9H1C4 597 aa13.46□□□□□ -0.25
IRGM-201ENST00000520549 VEGFBP49765 207 aa13.44□□□□□ -0.26
IRGM-201ENST00000520549 LINC01559Q495D7 138 aa13.44□□□□□ -0.26
IRGM-201ENST00000520549 ZSCAN1Q8NBB4 408 aa13.43□□□□□ -0.26
IRGM-201ENST00000520549 EVA1BQ9NVM1 165 aa13.43□□□□□ -0.26
IRGM-201ENST00000520549 TLL2Q9Y6L7 1015 aa13.43□□□□□ -0.26
IRGM-201ENST00000520549 BAP1Q92560 729 aa13.42□□□□□ -0.26
IRGM-201ENST00000520549 ZFP42Q96MM3 310 aa13.42□□□□□ -0.26
IRGM-201ENST00000520549 PLEKHG3A1L390 1219 aa13.41□□□□□ -0.26
IRGM-201ENST00000520549 H3BM21 787 aa13.41□□□□□ -0.26
IRGM-201ENST00000520549 SPIRE2Q8WWL2 714 aa13.41□□□□□ -0.26
IRGM-201ENST00000520549 SSTR3P32745 418 aaPredicted RBP13.4□□□□□ -0.26
IRGM-201ENST00000520549 KCNH2Q12809 1159 aa13.4□□□□□ -0.26
IRGM-201ENST00000520549 NDUFV2P19404 249 aa13.39□□□□□ -0.27
IRGM-201ENST00000520549 VARSP26640 1264 aaKnown RBP13.39□□□□□ -0.27
IRGM-201ENST00000520549 ZNF511Q8NB15 262 aa13.39□□□□□ -0.27
IRGM-201ENST00000520549 NNTQ13423 1086 aa13.38□□□□□ -0.27
IRGM-201ENST00000520549 PRR7Q8TB68 274 aa13.38□□□□□ -0.27
IRGM-201ENST00000520549 LORP23490 312 aaPredicted RBP13.37□□□□□ -0.27
IRGM-201ENST00000520549 ERBB4Q15303 1308 aa13.37□□□□□ -0.27
IRGM-201ENST00000520549 MOXD2PA6NHM9 499 aa13.36□□□□□ -0.27
IRGM-201ENST00000520549 MRPL14Q6P1L8 145 aaKnown RBP13.36□□□□□ -0.27
IRGM-201ENST00000520549 MPNDQ8N594 471 aa13.36□□□□□ -0.27
IRGM-201ENST00000520549 MTMR2Q13614 643 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms