RNA–Protein interactions for RNA: ENST00000520539.5

UBR5-207, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBR5, Length 10,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-207ENST00000520539 ERICH2A1L162 156 aa18.44■□□□□ 0.54
UBR5-207ENST00000520539 DDX23Q9BUQ8 820 aaKnown RBP18.44■□□□□ 0.54
UBR5-207ENST00000520539 SMC3Q9UQE7 1217 aa18.44■□□□□ 0.54
UBR5-207ENST00000520539 KIF15Q9NS87 1388 aa18.44■□□□□ 0.54
UBR5-207ENST00000520539 ZBED9Q6R2W3 1325 aa18.44■□□□□ 0.54
UBR5-207ENST00000520539 KIF3CO14782 793 aa18.44■□□□□ 0.54
UBR5-207ENST00000520539 TRIM34Q9BYJ4 488 aa18.44■□□□□ 0.54
UBR5-207ENST00000520539 MAP2K1Q02750 393 aaPredicted RBP18.43■□□□□ 0.54
UBR5-207ENST00000520539 FOXD4L5Q5VV16 416 aaPredicted RBP18.43■□□□□ 0.54
UBR5-207ENST00000520539 FOXD4L4Q8WXT5 416 aaPredicted RBP18.43■□□□□ 0.54
UBR5-207ENST00000520539 ARHGAP35Q9NRY4 1499 aa18.43■□□□□ 0.54
UBR5-207ENST00000520539 SMC2O95347 1197 aa18.42■□□□□ 0.54
UBR5-207ENST00000520539 INTS3Q68E01 1043 aaKnown RBP18.42■□□□□ 0.54
UBR5-207ENST00000520539 GCOM1H8Y6P7 765 aaPredicted RBP18.42■□□□□ 0.54
UBR5-207ENST00000520539 MYZAPP0CAP1 466 aa18.42■□□□□ 0.54
UBR5-207ENST00000520539 TAX1BP1Q86VP1 789 aa18.42■□□□□ 0.54
UBR5-207ENST00000520539 IVLP07476 585 aa18.42■□□□□ 0.54
UBR5-207ENST00000520539 DDX46Q7L014 1031 aaKnown RBP18.42■□□□□ 0.54
UBR5-207ENST00000520539 CGNQ9P2M7 1197 aaKnown RBP18.42■□□□□ 0.54
UBR5-207ENST00000520539 CCDC102AQ96A19 550 aa18.42■□□□□ 0.54
UBR5-207ENST00000520539 G3V3G9 751 aa18.41■□□□□ 0.54
UBR5-207ENST00000520539 DCAF8Q5TAQ9 597 aa18.41■□□□□ 0.54
UBR5-207ENST00000520539 DHX16O60231 1041 aaKnown RBP18.41■□□□□ 0.54
UBR5-207ENST00000520539 SDF4Q9BRK5 362 aa18.41■□□□□ 0.54
UBR5-207ENST00000520539 DZIP1LQ8IYY4 767 aaKnown RBP18.41■□□□□ 0.54
UBR5-207ENST00000520539 TIGD1Q96MW7 591 aa18.41■□□□□ 0.54
UBR5-207ENST00000520539 PDCL3Q9H2J4 239 aa18.41■□□□□ 0.54
UBR5-207ENST00000520539 PPFIBP1Q86W92 1011 aa18.41■□□□□ 0.54
UBR5-207ENST00000520539 PSMA5P28066 241 aa18.4■□□□□ 0.54
UBR5-207ENST00000520539 GOLGA6L9A6NEM1 432 aa18.4■□□□□ 0.54
UBR5-207ENST00000520539 JAKMIP3Q5VZ66 844 aa18.4■□□□□ 0.54
UBR5-207ENST00000520539 CCNB3Q8WWL7 1395 aa18.4■□□□□ 0.54
UBR5-207ENST00000520539 CTDP1Q9Y5B0 961 aaPredicted RBP18.4■□□□□ 0.54
UBR5-207ENST00000520539 PLPPR3Q6T4P5 718 aa18.39■□□□□ 0.54
UBR5-207ENST00000520539 NLRP13Q86W25 1043 aa18.39■□□□□ 0.54
UBR5-207ENST00000520539 RBM28Q9NW13 759 aaKnown RBP18.39■□□□□ 0.54
UBR5-207ENST00000520539 TRIM21P19474 475 aaKnown RBP18.39■□□□□ 0.53
UBR5-207ENST00000520539 CFAP45Q9UL16 551 aa18.39■□□□□ 0.53
UBR5-207ENST00000520539 ZNF396Q96N95 335 aaPredicted RBP18.39■□□□□ 0.53
UBR5-207ENST00000520539 ERICH4A6NGS2 130 aa18.38■□□□□ 0.53
UBR5-207ENST00000520539 RGL3Q3MIN7 710 aa18.38■□□□□ 0.53
UBR5-207ENST00000520539 UBE2Q2Q8WVN8 375 aa18.38■□□□□ 0.53
UBR5-207ENST00000520539 TICAM2Q86XR7 235 aa18.38■□□□□ 0.53
UBR5-207ENST00000520539 CCDC148Q8NFR7 591 aa18.38■□□□□ 0.53
UBR5-207ENST00000520539 DDX12PQ92771 950 aa18.38■□□□□ 0.53
UBR5-207ENST00000520539 ANO2Q9NQ90 1003 aa18.37■□□□□ 0.53
UBR5-207ENST00000520539 DDX19BQ9UMR2 479 aa18.37■□□□□ 0.53
UBR5-207ENST00000520539 PLEKHD1A6NEE1 506 aa18.37■□□□□ 0.53
UBR5-207ENST00000520539 SH3BGRP55822 239 aaPredicted RBP18.37■□□□□ 0.53
UBR5-207ENST00000520539 GTF2A1P52655 376 aaPredicted RBP18.37■□□□□ 0.53
UBR5-207ENST00000520539 IMMTQ16891 758 aaKnown RBP18.37■□□□□ 0.53
UBR5-207ENST00000520539 AEBP1Q8IUX7 1158 aa18.37■□□□□ 0.53
UBR5-207ENST00000520539 GPATCH11Q8N954 259 aa18.37■□□□□ 0.53
UBR5-207ENST00000520539 U2AF1L5P0DN76 240 aaPredicted RBP18.37■□□□□ 0.53
UBR5-207ENST00000520539 U2AF1Q01081 240 aaKnown RBP eCLIP18.37■□□□□ 0.537e-7■■□□□ 12.9
UBR5-207ENST00000520539 WWC2Q6AWC2 1192 aa18.37■□□□□ 0.53
UBR5-207ENST00000520539 FAM184BQ9ULE4 1060 aa18.36■□□□□ 0.53
UBR5-207ENST00000520539 VPS37CA5D8V6 355 aaPredicted RBP18.36■□□□□ 0.53
UBR5-207ENST00000520539 FRAT2O75474 233 aaPredicted RBP18.36■□□□□ 0.53
UBR5-207ENST00000520539 ERC2O15083 957 aa18.36■□□□□ 0.53
UBR5-207ENST00000520539 HSP90AB4PQ58FF6 505 aa18.36■□□□□ 0.53
UBR5-207ENST00000520539 SRPK2P78362 688 aaKnown RBP18.35■□□□□ 0.53
UBR5-207ENST00000520539 LMOD2Q6P5Q4 547 aa18.35■□□□□ 0.53
UBR5-207ENST00000520539 ZWINTO95229 277 aa18.35■□□□□ 0.53
UBR5-207ENST00000520539 UBXN4Q92575 508 aa18.35■□□□□ 0.53
UBR5-207ENST00000520539 CFDP1Q9UEE9 299 aaPredicted RBP18.35■□□□□ 0.53
UBR5-207ENST00000520539 MNAT1P51948 309 aa18.35■□□□□ 0.53
UBR5-207ENST00000520539 GRIPAP1Q4V328 841 aa18.35■□□□□ 0.53
UBR5-207ENST00000520539 ANKS4BQ8N8V4 417 aa18.34■□□□□ 0.53
UBR5-207ENST00000520539 ANKRD30AQ9BXX3 1397 aa18.34■□□□□ 0.53
UBR5-207ENST00000520539 SETD5Q9C0A6 1442 aa18.34■□□□□ 0.53
UBR5-207ENST00000520539 BBXQ8WY36 941 aaPredicted RBP18.34■□□□□ 0.53
UBR5-207ENST00000520539 VGFO15240 615 aaPredicted RBP18.34■□□□□ 0.53
UBR5-207ENST00000520539 DNAI2Q9GZS0 605 aa18.33■□□□□ 0.53
UBR5-207ENST00000520539 DNAJC21Q5F1R6 531 aaKnown RBP18.33■□□□□ 0.53
UBR5-207ENST00000520539 DNAAF4Q8WXU2 420 aa18.33■□□□□ 0.52
UBR5-207ENST00000520539 CETN2P41208 172 aa18.33■□□□□ 0.52
UBR5-207ENST00000520539 CCDC6Q16204 474 aa18.33■□□□□ 0.52
UBR5-207ENST00000520539 RILPL2Q969X0 211 aa18.33■□□□□ 0.52
UBR5-207ENST00000520539 PAF1Q8N7H5 531 aa18.33■□□□□ 0.52
UBR5-207ENST00000520539 NOL3O60936 208 aaKnown RBP18.32■□□□□ 0.52
UBR5-207ENST00000520539 NFKBIBQ15653 356 aa18.32■□□□□ 0.52
UBR5-207ENST00000520539 TERF2IPQ9NYB0 399 aa18.32■□□□□ 0.52
UBR5-207ENST00000520539 E9PSI1 815 aa18.32■□□□□ 0.52
UBR5-207ENST00000520539 FILIP1Q7Z7B0 1213 aa18.32■□□□□ 0.52
UBR5-207ENST00000520539 SART3Q15020 963 aaKnown RBP18.32■□□□□ 0.52
UBR5-207ENST00000520539 SUDS3Q9H7L9 328 aaPredicted RBP18.31■□□□□ 0.52
UBR5-207ENST00000520539 HSPA4P34932 840 aa18.31■□□□□ 0.52
UBR5-207ENST00000520539 NFXL1Q6ZNB6 911 aa18.31■□□□□ 0.52
UBR5-207ENST00000520539 RNF168Q8IYW5 571 aaPredicted RBP18.31■□□□□ 0.52
UBR5-207ENST00000520539 NAP1L3Q99457 506 aaPredicted RBP18.31■□□□□ 0.52
UBR5-207ENST00000520539 ZKSCAN2Q63HK3 967 aa18.31■□□□□ 0.52
UBR5-207ENST00000520539 ERC1Q8IUD2 1116 aa18.31■□□□□ 0.52
UBR5-207ENST00000520539 SREK1Q8WXA9 508 aaKnown RBP18.31■□□□□ 0.52
UBR5-207ENST00000520539 ZSCAN12O43309 604 aa18.31■□□□□ 0.52
UBR5-207ENST00000520539 BMS1Q14692 1282 aaKnown RBP18.3■□□□□ 0.52
UBR5-207ENST00000520539 TAOK3Q9H2K8 898 aa18.3■□□□□ 0.52
UBR5-207ENST00000520539 RALYLQ86SE5 291 aaKnown RBP18.3■□□□□ 0.52
UBR5-207ENST00000520539 CDK5RAP3Q96JB5 506 aa18.3■□□□□ 0.52
UBR5-207ENST00000520539 MIPOL1Q8TD10 442 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms