RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 ZNF772Q68DY9 489 aaPredicted RBP23.69■■□□□ 1.38
IGHV3-42-201ENST00000520410 CDC42BPGQ6DT37 1551 aa23.68■■□□□ 1.38
IGHV3-42-201ENST00000520410 YTHDC2Q9H6S0 1430 aaKnown RBP23.67■■□□□ 1.38
IGHV3-42-201ENST00000520410 PNPLA6Q8IY17 1366 aa23.66■■□□□ 1.38
IGHV3-42-201ENST00000520410 CFAP70Q5T0N1 1121 aa23.66■■□□□ 1.38
IGHV3-42-201ENST00000520410 C8orf37Q96NL8 207 aa23.66■■□□□ 1.38
IGHV3-42-201ENST00000520410 KDM2AQ9Y2K7 1162 aa23.66■■□□□ 1.38
IGHV3-42-201ENST00000520410 PLEKHH1Q9ULM0 1364 aa23.65■■□□□ 1.38
IGHV3-42-201ENST00000520410 KNDC1Q76NI1 1749 aa23.65■■□□□ 1.38
IGHV3-42-201ENST00000520410 MYOM2P54296 1465 aa23.65■■□□□ 1.38
IGHV3-42-201ENST00000520410 DHX57Q6P158 1386 aaKnown RBP23.65■■□□□ 1.38
IGHV3-42-201ENST00000520410 LAMC1P11047 1609 aa23.64■■□□□ 1.38
IGHV3-42-201ENST00000520410 ADAMTS2O95450 1211 aa23.64■■□□□ 1.37
IGHV3-42-201ENST00000520410 SAFB2Q14151 953 aaKnown RBP eCLIP23.64■■□□□ 1.37
IGHV3-42-201ENST00000520410 TECPR2O15040 1411 aa23.64■■□□□ 1.37
IGHV3-42-201ENST00000520410 ABCC11Q96J66 1382 aa23.64■■□□□ 1.37
IGHV3-42-201ENST00000520410 AFF2P51816 1311 aa23.63■■□□□ 1.37
IGHV3-42-201ENST00000520410 XPCQ01831 940 aaPredicted RBP23.62■■□□□ 1.37
IGHV3-42-201ENST00000520410 C14orf93Q9H972 538 aaKnown RBP23.62■■□□□ 1.37
IGHV3-42-201ENST00000520410 NPHP3Q7Z494 1330 aa23.6■■□□□ 1.37
IGHV3-42-201ENST00000520410 DCAF11Q8TEB1 546 aa23.6■■□□□ 1.37
IGHV3-42-201ENST00000520410 POGKQ9P215 609 aa23.6■■□□□ 1.37
IGHV3-42-201ENST00000520410 SOS2Q07890 1332 aaPredicted RBP23.59■■□□□ 1.37
IGHV3-42-201ENST00000520410 FOXO3O43524 673 aa23.58■■□□□ 1.37
IGHV3-42-201ENST00000520410 NRXN1Q9ULB1 1477 aa23.57■■□□□ 1.36
IGHV3-42-201ENST00000520410 RXRBP28702 533 aa23.57■■□□□ 1.36
IGHV3-42-201ENST00000520410 NGLY1Q96IV0 654 aa23.57■■□□□ 1.36
IGHV3-42-201ENST00000520410 PRAM1Q96QH2 718 aa23.57■■□□□ 1.36
IGHV3-42-201ENST00000520410 FMN2Q9NZ56 1722 aa23.54■■□□□ 1.36
IGHV3-42-201ENST00000520410 TRAK1Q9UPV9 953 aa23.54■■□□□ 1.36
IGHV3-42-201ENST00000520410 PLEKHG5O94827 1062 aa23.52■■□□□ 1.36
IGHV3-42-201ENST00000520410 HRCP23327 699 aa23.52■■□□□ 1.36
IGHV3-42-201ENST00000520410 SIRT1Q96EB6 747 aa23.5■■□□□ 1.35
IGHV3-42-201ENST00000520410 QTRT2Q9H974 415 aaKnown RBP23.5■■□□□ 1.35
IGHV3-42-201ENST00000520410 KIF1AQ12756 1690 aa23.5■■□□□ 1.35
IGHV3-42-201ENST00000520410 PXDNQ92626 1479 aa23.49■■□□□ 1.35
IGHV3-42-201ENST00000520410 HAP1P54257 671 aaPredicted RBP23.49■■□□□ 1.35
IGHV3-42-201ENST00000520410 HIRIP3Q9BW71 556 aaPredicted RBP23.49■■□□□ 1.35
IGHV3-42-201ENST00000520410 LMOD2Q6P5Q4 547 aa23.47■■□□□ 1.35
IGHV3-42-201ENST00000520410 USP21Q9UK80 565 aa23.47■■□□□ 1.35
IGHV3-42-201ENST00000520410 PHF8Q9UPP1 1060 aa23.47■■□□□ 1.35
IGHV3-42-201ENST00000520410 MINK1Q8N4C8 1332 aaPredicted RBP23.47■■□□□ 1.35
IGHV3-42-201ENST00000520410 KRT28Q7Z3Y7 464 aa23.46■■□□□ 1.35
IGHV3-42-201ENST00000520410 DLC1Q96QB1 1528 aa23.46■■□□□ 1.35
IGHV3-42-201ENST00000520410 COL22A1Q8NFW1 1626 aaPredicted RBP23.45■■□□□ 1.34
IGHV3-42-201ENST00000520410 ADGRB1O14514 1584 aa23.44■■□□□ 1.34
IGHV3-42-201ENST00000520410 RBM6P78332 1123 aaKnown RBP23.44■■□□□ 1.34
IGHV3-42-201ENST00000520410 PSME1Q06323 249 aa23.43■■□□□ 1.34
IGHV3-42-201ENST00000520410 PMFBP1Q8TBY8 1022 aa23.43■■□□□ 1.34
IGHV3-42-201ENST00000520410 STAC3Q96MF2 364 aa23.42■■□□□ 1.34
IGHV3-42-201ENST00000520410 RGPD8O14715 1765 aaPredicted RBP23.42■■□□□ 1.34
IGHV3-42-201ENST00000520410 TRPC5Q9UL62 973 aaPredicted RBP23.4■■□□□ 1.34
IGHV3-42-201ENST00000520410 SPATA31A3Q5VYP0 1347 aa23.39■■□□□ 1.34
IGHV3-42-201ENST00000520410 CDK12Q9NYV4 1490 aaPredicted RBP23.39■■□□□ 1.34
IGHV3-42-201ENST00000520410 RGS12O14924 1447 aa23.39■■□□□ 1.33
IGHV3-42-201ENST00000520410 EIF3AQ14152 1382 aaKnown RBP23.39■■□□□ 1.33
IGHV3-42-201ENST00000520410 TNS3Q68CZ2 1445 aa23.38■■□□□ 1.33
IGHV3-42-201ENST00000520410 ADGRB2O60241 1585 aa23.37■■□□□ 1.33
IGHV3-42-201ENST00000520410 ANKARQ7Z5J8 1434 aa23.37■■□□□ 1.33
IGHV3-42-201ENST00000520410 UPF1Q92900 1129 aaKnown RBP eCLIP23.35■■□□□ 1.33
IGHV3-42-201ENST00000520410 CABLES1Q8TDN4 633 aa23.34■■□□□ 1.33
IGHV3-42-201ENST00000520410 USP32Q8NFA0 1604 aa23.33■■□□□ 1.33
IGHV3-42-201ENST00000520410 MARF1Q9Y4F3 1742 aaKnown RBP23.33■■□□□ 1.33
IGHV3-42-201ENST00000520410 GPRASP1Q5JY77 1395 aa23.33■■□□□ 1.33
IGHV3-42-201ENST00000520410 WASLO00401 505 aaPredicted RBP23.33■■□□□ 1.33
IGHV3-42-201ENST00000520410 FNBP4Q8N3X1 1017 aaPredicted RBP23.33■■□□□ 1.33
IGHV3-42-201ENST00000520410 ARHGEF28Q8N1W1 1705 aaKnown RBP23.33■■□□□ 1.32
IGHV3-42-201ENST00000520410 TULP4Q9NRJ4 1543 aa23.33■■□□□ 1.32
IGHV3-42-201ENST00000520410 NGDNQ8NEJ9 315 aaKnown RBP23.32■■□□□ 1.32
IGHV3-42-201ENST00000520410 ARHGEF10O15013 1369 aa23.31■■□□□ 1.32
IGHV3-42-201ENST00000520410 PAK3O75914 559 aaPredicted RBP23.31■■□□□ 1.32
IGHV3-42-201ENST00000520410 ATRNO75882 1429 aa23.3■■□□□ 1.32
IGHV3-42-201ENST00000520410 SBNO1A3KN83 1393 aa23.29■■□□□ 1.32
IGHV3-42-201ENST00000520410 CCDC9Q9Y3X0 531 aaKnown RBP23.29■■□□□ 1.32
IGHV3-42-201ENST00000520410 PRR36Q9H6K5 1346 aa23.29■■□□□ 1.32
IGHV3-42-201ENST00000520410 NEUROD1Q13562 356 aa23.28■■□□□ 1.32
IGHV3-42-201ENST00000520410 BCL9LQ86UU0 1499 aa23.26■■□□□ 1.31
IGHV3-42-201ENST00000520410 NBPF1Q3BBV0 1214 aa23.25■■□□□ 1.31
IGHV3-42-201ENST00000520410 UNC5CLQ8IV45 518 aa23.25■■□□□ 1.31
IGHV3-42-201ENST00000520410 ATAD2Q6PL18 1390 aa23.25■■□□□ 1.31
IGHV3-42-201ENST00000520410 KIAA1210Q9ULL0 1709 aa23.25■■□□□ 1.31
IGHV3-42-201ENST00000520410 NUDT16Q96DE0 195 aaKnown RBP23.24■■□□□ 1.31
IGHV3-42-201ENST00000520410 GJD4Q96KN9 370 aaPredicted RBP23.24■■□□□ 1.31
IGHV3-42-201ENST00000520410 CDK19Q9BWU1 502 aa23.24■■□□□ 1.31
IGHV3-42-201ENST00000520410 ITSN1Q15811 1721 aa23.23■■□□□ 1.31
IGHV3-42-201ENST00000520410 SIN3AQ96ST3 1273 aa23.23■■□□□ 1.31
IGHV3-42-201ENST00000520410 ABCA3Q99758 1704 aa23.22■■□□□ 1.31
IGHV3-42-201ENST00000520410 A0A0G2JS52 829 aa23.21■■□□□ 1.31
IGHV3-42-201ENST00000520410 SRPK2P78362 688 aaKnown RBP23.21■■□□□ 1.31
IGHV3-42-201ENST00000520410 MYT1Q01538 1121 aa23.21■■□□□ 1.31
IGHV3-42-201ENST00000520410 ATP7BP35670 1465 aa23.21■■□□□ 1.31
IGHV3-42-201ENST00000520410 PLCH1Q4KWH8 1693 aa23.2■■□□□ 1.3
IGHV3-42-201ENST00000520410 SLIT2O94813 1529 aa23.2■■□□□ 1.3
IGHV3-42-201ENST00000520410 L3MBTL2Q969R5 705 aa23.2■■□□□ 1.3
IGHV3-42-201ENST00000520410 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.19■■□□□ 1.3
IGHV3-42-201ENST00000520410 TRPM3Q9HCF6 1732 aaPredicted RBP23.19■■□□□ 1.3
IGHV3-42-201ENST00000520410 RALGAPBQ86X10 1494 aa23.18■■□□□ 1.3
IGHV3-42-201ENST00000520410 CENPJQ9HC77 1338 aaPredicted RBP23.18■■□□□ 1.3
IGHV3-42-201ENST00000520410 NUTM2GQ5VZR2 741 aa23.15■■□□□ 1.3
IGHV3-42-201ENST00000520410 ALS2Q96Q42 1657 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 178.8 ms