RNA–Protein interactions for RNA: ENST00000520172.5

RUNX1T1-223, Transcript of RUNX1 translocation partner 1, human

TSL 4

Gene RUNX1T1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RUNX1T1-223	ENST00000520172	CCDC9	Q9Y3X0	531 aa	Known RBP	12.65	□□□□□ -0.38
RUNX1T1-223	ENST00000520172	XRN1	Q8IZH2	1706 aa	Known RBP	12.65	□□□□□ -0.38
RUNX1T1-223	ENST00000520172	NOS1	P29475	1434 aa		12.64	□□□□□ -0.39
RUNX1T1-223	ENST00000520172	DUOX2	Q9NRD8	1548 aa		12.64	□□□□□ -0.39
RUNX1T1-223	ENST00000520172	KCNQ2	O43526	872 aa		12.64	□□□□□ -0.39
RUNX1T1-223	ENST00000520172	CAPN15	O75808	1086 aa		12.64	□□□□□ -0.39
RUNX1T1-223	ENST00000520172	SLC34A2	O95436	690 aa		12.64	□□□□□ -0.39
RUNX1T1-223	ENST00000520172	ADGRB2	O60241	1585 aa		12.64	□□□□□ -0.39
RUNX1T1-223	ENST00000520172	SLC52A1	Q9NWF4	448 aa		12.63	□□□□□ -0.39
RUNX1T1-223	ENST00000520172	KANK1	Q14678	1352 aa		12.63	□□□□□ -0.39
RUNX1T1-223	ENST00000520172	CEP162	Q5TB80	1403 aa		12.62	□□□□□ -0.39
RUNX1T1-223	ENST00000520172	ONECUT3	O60422	494 aa	Predicted RBP	12.62	□□□□□ -0.39
RUNX1T1-223	ENST00000520172	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	12.62	□□□□□ -0.39
RUNX1T1-223	ENST00000520172	ORAI2	Q96SN7	254 aa		12.62	□□□□□ -0.39
RUNX1T1-223	ENST00000520172	VPS72	Q15906	364 aa		12.61	□□□□□ -0.39
RUNX1T1-223	ENST00000520172	FAM182B	Q5T319	152 aa		12.61	□□□□□ -0.39
RUNX1T1-223	ENST00000520172	TMEM131L	A2VDJ0	1609 aa		12.61	□□□□□ -0.39
RUNX1T1-223	ENST00000520172	CAMKK2	Q96RR4	588 aa		12.6	□□□□□ -0.39
RUNX1T1-223	ENST00000520172	NUP188	Q5SRE5	1749 aa		12.59	□□□□□ -0.39
RUNX1T1-223	ENST00000520172	PTPN23	Q9H3S7	1636 aa		12.59	□□□□□ -0.39
RUNX1T1-223	ENST00000520172	LMTK2	Q8IWU2	1503 aa		12.59	□□□□□ -0.39
RUNX1T1-223	ENST00000520172	RREB1	Q92766	1687 aa		12.59	□□□□□ -0.39
RUNX1T1-223	ENST00000520172	NRK	Q7Z2Y5	1582 aa		12.59	□□□□□ -0.39
RUNX1T1-223	ENST00000520172	NBPF8	Q3BBV2	869 aa		12.58	□□□□□ -0.4
RUNX1T1-223	ENST00000520172	NBPF14	Q5TI25	921 aa		12.58	□□□□□ -0.4
RUNX1T1-223	ENST00000520172	USP32	Q8NFA0	1604 aa		12.58	□□□□□ -0.4
RUNX1T1-223	ENST00000520172	PARD3	Q8TEW0	1356 aa		12.57	□□□□□ -0.4
RUNX1T1-223	ENST00000520172	ERBIN	Q96RT1	1412 aa		12.57	□□□□□ -0.4
RUNX1T1-223	ENST00000520172	PLCH1	Q4KWH8	1693 aa		12.57	□□□□□ -0.4
RUNX1T1-223	ENST00000520172	CHGA	P10645	457 aa	Known RBP	12.56	□□□□□ -0.4
RUNX1T1-223	ENST00000520172	FAM98C	Q17RN3	349 aa	Known RBP	12.56	□□□□□ -0.4
RUNX1T1-223	ENST00000520172	KIF15	Q9NS87	1388 aa		12.56	□□□□□ -0.4
RUNX1T1-223	ENST00000520172	PXDN	Q92626	1479 aa		12.55	□□□□□ -0.4
RUNX1T1-223	ENST00000520172	NWD2	Q9ULI1	1742 aa		12.55	□□□□□ -0.4
RUNX1T1-223	ENST00000520172	XPC	Q01831	940 aa	Predicted RBP	12.55	□□□□□ -0.4
RUNX1T1-223	ENST00000520172	NPHP3	Q7Z494	1330 aa		12.55	□□□□□ -0.4
RUNX1T1-223	ENST00000520172	MYOM1	P52179	1685 aa		12.54	□□□□□ -0.4
RUNX1T1-223	ENST00000520172	TRIM37	O94972	964 aa		12.53	□□□□□ -0.4
RUNX1T1-223	ENST00000520172	APBA3	O96018	575 aa		12.53	□□□□□ -0.4
RUNX1T1-223	ENST00000520172	ADGRL2	O95490	1459 aa		12.53	□□□□□ -0.4
RUNX1T1-223	ENST00000520172	NRXN3	Q9Y4C0	1643 aa		12.51	□□□□□ -0.41
RUNX1T1-223	ENST00000520172	HAP1	P54257	671 aa	Predicted RBP	12.51	□□□□□ -0.41
RUNX1T1-223	ENST00000520172	HSPA6	P17066	643 aa		12.5	□□□□□ -0.41
RUNX1T1-223	ENST00000520172	SHANK3	Q9BYB0	1731 aa		12.49	□□□□□ -0.41
RUNX1T1-223	ENST00000520172	MET	P08581	1390 aa		12.49	□□□□□ -0.41
RUNX1T1-223	ENST00000520172	RRP7BP	Q9NSQ0	103 aa		12.49	□□□□□ -0.41
RUNX1T1-223	ENST00000520172	PCDH10	Q9P2E7	1040 aa		12.49	□□□□□ -0.41
RUNX1T1-223	ENST00000520172	GOLGB1	Q14789	3259 aa	Known RBP	12.49	□□□□□ -0.41
RUNX1T1-223	ENST00000520172	FOXO3	O43524	673 aa		12.48	□□□□□ -0.41
RUNX1T1-223	ENST00000520172	PRELP	P51888	382 aa		12.48	□□□□□ -0.41
RUNX1T1-223	ENST00000520172	SYT17	Q9BSW7	474 aa		12.48	□□□□□ -0.41
RUNX1T1-223	ENST00000520172	FHDC1	Q9C0D6	1143 aa	Predicted RBP	12.48	□□□□□ -0.41
RUNX1T1-223	ENST00000520172	FAM83G	A6ND36	823 aa		12.47	□□□□□ -0.41
RUNX1T1-223	ENST00000520172	ESCO1	Q5FWF5	840 aa		12.47	□□□□□ -0.41
RUNX1T1-223	ENST00000520172	CASZ1	Q86V15	1759 aa		12.47	□□□□□ -0.41
RUNX1T1-223	ENST00000520172	DLC1	Q96QB1	1528 aa		12.47	□□□□□ -0.41
RUNX1T1-223	ENST00000520172	PLEKHG5	O94827	1062 aa		12.46	□□□□□ -0.41
RUNX1T1-223	ENST00000520172	NRAP	Q86VF7	1730 aa		12.45	□□□□□ -0.42
RUNX1T1-223	ENST00000520172	THSD7A	Q9UPZ6	1657 aa		12.45	□□□□□ -0.42
RUNX1T1-223	ENST00000520172	ZBTB7A	O95365	584 aa		12.45	□□□□□ -0.42
RUNX1T1-223	ENST00000520172	COL13A1	Q5TAT6	717 aa	Predicted RBP	12.45	□□□□□ -0.42
RUNX1T1-223	ENST00000520172	FAM196A	Q6ZSG2	479 aa		12.44	□□□□□ -0.42
RUNX1T1-223	ENST00000520172	LRPPRC	P42704	1394 aa	Known RBP	12.43	□□□□□ -0.42
RUNX1T1-223	ENST00000520172	SPATA31A3	Q5VYP0	1347 aa		12.43	□□□□□ -0.42
RUNX1T1-223	ENST00000520172	PTGER2	P43116	358 aa		12.43	□□□□□ -0.42
RUNX1T1-223	ENST00000520172	TNS4	Q8IZW8	715 aa		12.43	□□□□□ -0.42
RUNX1T1-223	ENST00000520172	CROCC2	H7BZ55	1655 aa		12.42	□□□□□ -0.42
RUNX1T1-223	ENST00000520172	GPR162	Q16538	588 aa		12.42	□□□□□ -0.42
RUNX1T1-223	ENST00000520172	CABLES1	Q8TDN4	633 aa		12.42	□□□□□ -0.42
RUNX1T1-223	ENST00000520172	ATF5	Q9Y2D1	282 aa	Predicted RBP	12.42	□□□□□ -0.42
RUNX1T1-223	ENST00000520172	ABCA3	Q99758	1704 aa		12.42	□□□□□ -0.42
RUNX1T1-223	ENST00000520172	PDGFD	Q9GZP0	370 aa	Predicted RBP	12.41	□□□□□ -0.42
RUNX1T1-223	ENST00000520172	NEXMIF	Q5QGS0	1516 aa		12.41	□□□□□ -0.42
RUNX1T1-223	ENST00000520172	MYOM3	Q5VTT5	1437 aa		12.4	□□□□□ -0.42
RUNX1T1-223	ENST00000520172	ROBO2	Q9HCK4	1378 aa		12.39	□□□□□ -0.43
RUNX1T1-223	ENST00000520172	IQGAP3	Q86VI3	1631 aa		12.38	□□□□□ -0.43
RUNX1T1-223	ENST00000520172	ANO8	Q9HCE9	1232 aa	Predicted RBP	12.38	□□□□□ -0.43
RUNX1T1-223	ENST00000520172	BTG4	Q9NY30	223 aa		12.38	□□□□□ -0.43
RUNX1T1-223	ENST00000520172	SPATA31A5	Q5VU36	1347 aa		12.37	□□□□□ -0.43
RUNX1T1-223	ENST00000520172	SPATA31A7	Q8IWB4	1347 aa		12.37	□□□□□ -0.43
RUNX1T1-223	ENST00000520172	CCDC144A	A2RUR9	1427 aa		12.37	□□□□□ -0.43
RUNX1T1-223	ENST00000520172	CDC42BPG	Q6DT37	1551 aa		12.37	□□□□□ -0.43
RUNX1T1-223	ENST00000520172	PELP1	Q8IZL8	1130 aa	Known RBP	12.36	□□□□□ -0.43
RUNX1T1-223	ENST00000520172	TNS3	Q68CZ2	1445 aa		12.36	□□□□□ -0.43
RUNX1T1-223	ENST00000520172	ATP10D	Q9P241	1426 aa		12.36	□□□□□ -0.43
RUNX1T1-223	ENST00000520172	NUTM2F	A1L443	756 aa		12.34	□□□□□ -0.43
RUNX1T1-223	ENST00000520172	GPBP1L1	Q9HC44	474 aa	Predicted RBP	12.34	□□□□□ -0.43
RUNX1T1-223	ENST00000520172	ABCC5	O15440	1437 aa		12.34	□□□□□ -0.43
RUNX1T1-223	ENST00000520172	LMOD2	Q6P5Q4	547 aa		12.33	□□□□□ -0.44
RUNX1T1-223	ENST00000520172	KRT28	Q7Z3Y7	464 aa		12.33	□□□□□ -0.44
RUNX1T1-223	ENST00000520172	COL14A1	Q05707	1796 aa	Known RBP	12.33	□□□□□ -0.44
RUNX1T1-223	ENST00000520172	KIF1A	Q12756	1690 aa		12.32	□□□□□ -0.44
RUNX1T1-223	ENST00000520172	MAP3K5	Q99683	1374 aa		12.32	□□□□□ -0.44
RUNX1T1-223	ENST00000520172	HFM1	A2PYH4	1435 aa		12.32	□□□□□ -0.44
RUNX1T1-223	ENST00000520172	RGPD3	A6NKT7	1758 aa	Predicted RBP	12.32	□□□□□ -0.44
RUNX1T1-223	ENST00000520172	RGPD4	Q7Z3J3	1758 aa		12.32	□□□□□ -0.44
RUNX1T1-223	ENST00000520172	APLP1	P51693	650 aa		12.31	□□□□□ -0.44
RUNX1T1-223	ENST00000520172	ARX	Q96QS3	562 aa		12.31	□□□□□ -0.44
RUNX1T1-223	ENST00000520172	BCL11B	Q9C0K0	894 aa	Predicted RBP	12.31	□□□□□ -0.44
RUNX1T1-223	ENST00000520172	PCNT	O95613	3336 aa		12.31	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms