RNA–Protein interactions for RNA: ENST00000520158.5

CTNNA1-219, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 719 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-219ENST00000520158 ACIN1Q9UKV3 1341 aaKnown RBP8.53□□□□□ -1.04
CTNNA1-219ENST00000520158 ADGRL3Q9HAR2 1447 aa8.52□□□□□ -1.05
CTNNA1-219ENST00000520158 SETD1AO15047 1707 aaKnown RBP8.51□□□□□ -1.05
CTNNA1-219ENST00000520158 PTCH1Q13635 1447 aa8.51□□□□□ -1.05
CTNNA1-219ENST00000520158 LRP6O75581 1613 aa8.51□□□□□ -1.05
CTNNA1-219ENST00000520158 LAMC1P11047 1609 aa8.51□□□□□ -1.05
CTNNA1-219ENST00000520158 NHSL1Q5SYE7 1610 aa8.51□□□□□ -1.05
CTNNA1-219ENST00000520158 ASXL1Q8IXJ9 1541 aa8.5□□□□□ -1.05
CTNNA1-219ENST00000520158 HAX1O00165 279 aa8.5□□□□□ -1.05
CTNNA1-219ENST00000520158 ZNF772Q68DY9 489 aaPredicted RBP8.5□□□□□ -1.05
CTNNA1-219ENST00000520158 LRRC59Q96AG4 307 aaKnown RBP8.5□□□□□ -1.05
CTNNA1-219ENST00000520158 PPLO60437 1756 aa8.5□□□□□ -1.05
CTNNA1-219ENST00000520158 TRIM52Q96A61 297 aa8.49□□□□□ -1.05
CTNNA1-219ENST00000520158 C1orf167Q5SNV9 1468 aa8.48□□□□□ -1.05
CTNNA1-219ENST00000520158 NALCNQ8IZF0 1738 aa8.48□□□□□ -1.05
CTNNA1-219ENST00000520158 ROBO2Q9HCK4 1378 aa8.48□□□□□ -1.05
CTNNA1-219ENST00000520158 SPATA31E1Q6ZUB1 1445 aa8.47□□□□□ -1.05
CTNNA1-219ENST00000520158 AKT1S1Q96B36 256 aa8.47□□□□□ -1.05
CTNNA1-219ENST00000520158 MPHOSPH9Q99550 1183 aa8.47□□□□□ -1.05
CTNNA1-219ENST00000520158 SOS2Q07890 1332 aaPredicted RBP8.47□□□□□ -1.05
CTNNA1-219ENST00000520158 ANKRD30BQ9BXX2 1392 aa8.47□□□□□ -1.05
CTNNA1-219ENST00000520158 TECPR2O15040 1411 aa8.46□□□□□ -1.05
CTNNA1-219ENST00000520158 CDK12Q9NYV4 1490 aaPredicted RBP8.46□□□□□ -1.05
CTNNA1-219ENST00000520158 SIRT1Q96EB6 747 aa8.46□□□□□ -1.06
CTNNA1-219ENST00000520158 PNPLA6Q8IY17 1366 aa8.46□□□□□ -1.06
CTNNA1-219ENST00000520158 ADGRF5Q8IZF2 1346 aa8.45□□□□□ -1.06
CTNNA1-219ENST00000520158 ABCC11Q96J66 1382 aa8.45□□□□□ -1.06
CTNNA1-219ENST00000520158 CCDC144AA2RUR9 1427 aa8.45□□□□□ -1.06
CTNNA1-219ENST00000520158 IFT172Q9UG01 1749 aa8.44□□□□□ -1.06
CTNNA1-219ENST00000520158 RXRBP28702 533 aa8.44□□□□□ -1.06
CTNNA1-219ENST00000520158 MEX3CQ5U5Q3 659 aaKnown RBP8.44□□□□□ -1.06
CTNNA1-219ENST00000520158 EVX2Q03828 476 aa8.43□□□□□ -1.06
CTNNA1-219ENST00000520158 ORAI2Q96SN7 254 aa8.43□□□□□ -1.06
CTNNA1-219ENST00000520158 AFF2P51816 1311 aa8.43□□□□□ -1.06
CTNNA1-219ENST00000520158 LRPPRCP42704 1394 aaKnown RBP8.43□□□□□ -1.06
CTNNA1-219ENST00000520158 CDC42BPGQ6DT37 1551 aa8.43□□□□□ -1.06
CTNNA1-219ENST00000520158 SAMD1Q6SPF0 538 aaPredicted RBP8.42□□□□□ -1.06
CTNNA1-219ENST00000520158 DDX17Q92841 729 aaKnown RBP8.42□□□□□ -1.06
CTNNA1-219ENST00000520158 UPF1Q92900 1129 aaKnown RBP eCLIP8.42□□□□□ -1.06
CTNNA1-219ENST00000520158 C14orf93Q9H972 538 aaKnown RBP8.42□□□□□ -1.06
CTNNA1-219ENST00000520158 PIK3C2GO75747 1445 aa8.42□□□□□ -1.06
CTNNA1-219ENST00000520158 NRXN1Q9ULB1 1477 aa8.42□□□□□ -1.06
CTNNA1-219ENST00000520158 COL22A1Q8NFW1 1626 aaPredicted RBP8.42□□□□□ -1.06
CTNNA1-219ENST00000520158 KNDC1Q76NI1 1749 aa8.41□□□□□ -1.06
CTNNA1-219ENST00000520158 NUTM2BA6NNL0 878 aaPredicted RBP8.41□□□□□ -1.06
CTNNA1-219ENST00000520158 NUTM2EB1AL46 878 aaPredicted RBP8.41□□□□□ -1.06
CTNNA1-219ENST00000520158 HRCP23327 699 aa8.41□□□□□ -1.06
CTNNA1-219ENST00000520158 FXR2P51116 673 aaKnown RBP eCLIP8.41□□□□□ -1.06
CTNNA1-219ENST00000520158 NUTM2AQ8IVF1 878 aaPredicted RBP8.41□□□□□ -1.06
CTNNA1-219ENST00000520158 FNBP4Q8N3X1 1017 aaPredicted RBP8.41□□□□□ -1.06
CTNNA1-219ENST00000520158 QTRT2Q9H974 415 aaKnown RBP8.41□□□□□ -1.06
CTNNA1-219ENST00000520158 PXDNQ92626 1479 aa8.4□□□□□ -1.06
CTNNA1-219ENST00000520158 NPHP3Q7Z494 1330 aa8.4□□□□□ -1.06
CTNNA1-219ENST00000520158 RBM6P78332 1123 aaKnown RBP8.4□□□□□ -1.06
CTNNA1-219ENST00000520158 RGL3Q3MIN7 710 aa8.4□□□□□ -1.06
CTNNA1-219ENST00000520158 MYOM2P54296 1465 aa8.39□□□□□ -1.07
CTNNA1-219ENST00000520158 YTHDC2Q9H6S0 1430 aaKnown RBP8.39□□□□□ -1.07
CTNNA1-219ENST00000520158 POLA2Q14181 598 aa8.39□□□□□ -1.07
CTNNA1-219ENST00000520158 WAPLQ7Z5K2 1190 aa8.39□□□□□ -1.07
CTNNA1-219ENST00000520158 REM2Q8IYK8 340 aaPredicted RBP8.39□□□□□ -1.07
CTNNA1-219ENST00000520158 STAC3Q96MF2 364 aa8.39□□□□□ -1.07
CTNNA1-219ENST00000520158 ESCO1Q5FWF5 840 aa8.38□□□□□ -1.07
CTNNA1-219ENST00000520158 TMEM132EQ6IEE7 984 aa8.38□□□□□ -1.07
CTNNA1-219ENST00000520158 NGLY1Q96IV0 654 aa8.38□□□□□ -1.07
CTNNA1-219ENST00000520158 C8orf37Q96NL8 207 aa8.38□□□□□ -1.07
CTNNA1-219ENST00000520158 DHX57Q6P158 1386 aaKnown RBP8.37□□□□□ -1.07
CTNNA1-219ENST00000520158 FOXO3O43524 673 aa8.37□□□□□ -1.07
CTNNA1-219ENST00000520158 TRPC5Q9UL62 973 aaPredicted RBP8.37□□□□□ -1.07
CTNNA1-219ENST00000520158 FMN2Q9NZ56 1722 aa8.37□□□□□ -1.07
CTNNA1-219ENST00000520158 PLEKHH1Q9ULM0 1364 aa8.36□□□□□ -1.07
CTNNA1-219ENST00000520158 SPATA31A3Q5VYP0 1347 aa8.36□□□□□ -1.07
CTNNA1-219ENST00000520158 DLC1Q96QB1 1528 aa8.36□□□□□ -1.07
CTNNA1-219ENST00000520158 ADAMTS2O95450 1211 aa8.36□□□□□ -1.07
CTNNA1-219ENST00000520158 STK26Q9P289 416 aa8.36□□□□□ -1.07
CTNNA1-219ENST00000520158 USP21Q9UK80 565 aa8.36□□□□□ -1.07
CTNNA1-219ENST00000520158 MARF1Q9Y4F3 1742 aaKnown RBP8.36□□□□□ -1.07
CTNNA1-219ENST00000520158 BCL9LQ86UU0 1499 aa8.36□□□□□ -1.07
CTNNA1-219ENST00000520158 KIF1AQ12756 1690 aa8.36□□□□□ -1.07
CTNNA1-219ENST00000520158 RGS12O14924 1447 aa8.36□□□□□ -1.07
CTNNA1-219ENST00000520158 ATRNO75882 1429 aa8.36□□□□□ -1.07
CTNNA1-219ENST00000520158 RAB3GAP2Q9H2M9 1393 aa8.35□□□□□ -1.07
CTNNA1-219ENST00000520158 CFAP70Q5T0N1 1121 aa8.35□□□□□ -1.07
CTNNA1-219ENST00000520158 LHX8Q68G74 356 aa8.35□□□□□ -1.07
CTNNA1-219ENST00000520158 KRT28Q7Z3Y7 464 aa8.34□□□□□ -1.07
CTNNA1-219ENST00000520158 ADGRB1O14514 1584 aa8.34□□□□□ -1.07
CTNNA1-219ENST00000520158 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.34□□□□□ -1.07
CTNNA1-219ENST00000520158 SBNO1A3KN83 1393 aa8.34□□□□□ -1.07
CTNNA1-219ENST00000520158 RGPD8O14715 1765 aaPredicted RBP8.33□□□□□ -1.08
CTNNA1-219ENST00000520158 PSME1Q06323 249 aa8.33□□□□□ -1.08
CTNNA1-219ENST00000520158 ANKARQ7Z5J8 1434 aa8.33□□□□□ -1.08
CTNNA1-219ENST00000520158 CCDC125Q86Z20 511 aa8.33□□□□□ -1.08
CTNNA1-219ENST00000520158 PHF8Q9UPP1 1060 aa8.33□□□□□ -1.08
CTNNA1-219ENST00000520158 SLIT2O94813 1529 aa8.33□□□□□ -1.08
CTNNA1-219ENST00000520158 ADGRB2O60241 1585 aa8.32□□□□□ -1.08
CTNNA1-219ENST00000520158 ONECUT3O60422 494 aaPredicted RBP8.32□□□□□ -1.08
CTNNA1-219ENST00000520158 GJD4Q96KN9 370 aaPredicted RBP8.32□□□□□ -1.08
CTNNA1-219ENST00000520158 PRAM1Q96QH2 718 aa8.32□□□□□ -1.08
CTNNA1-219ENST00000520158 ATAD2Q6PL18 1390 aa8.32□□□□□ -1.08
CTNNA1-219ENST00000520158 NUTM2FA1L443 756 aa8.31□□□□□ -1.08
CTNNA1-219ENST00000520158 PITPNM1O00562 1244 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms