RNA–Protein interactions for RNA: ENST00000520122.1

AP3B1-206, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 3

Gene AP3B1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-206ENST00000520122 DACH1Q9UI36 760 aa11.57□□□□□ -0.56
AP3B1-206ENST00000520122 C11orf95C9JLR9 678 aaPredicted RBP11.56□□□□□ -0.56
AP3B1-206ENST00000520122 HAP1P54257 671 aaPredicted RBP11.55□□□□□ -0.56
AP3B1-206ENST00000520122 GMPR2Q9P2T1 348 aaKnown RBP11.55□□□□□ -0.56
AP3B1-206ENST00000520122 TULP1O00294 542 aaPredicted RBP11.54□□□□□ -0.56
AP3B1-206ENST00000520122 WNT7AO00755 349 aa11.54□□□□□ -0.56
AP3B1-206ENST00000520122 KDM4AO75164 1064 aa11.53□□□□□ -0.56
AP3B1-206ENST00000520122 CD46P15529 392 aa11.53□□□□□ -0.56
AP3B1-206ENST00000520122 TRIM32Q13049 653 aa11.53□□□□□ -0.56
AP3B1-206ENST00000520122 SNIP1Q8TAD8 396 aaKnown RBP11.53□□□□□ -0.56
AP3B1-206ENST00000520122 USB1Q9BQ65 265 aaKnown RBP11.53□□□□□ -0.56
AP3B1-206ENST00000520122 SMCPP49901 116 aaPredicted RBP11.52□□□□□ -0.57
AP3B1-206ENST00000520122 MMP16P51512 607 aa11.51□□□□□ -0.57
AP3B1-206ENST00000520122 MAP2K5Q13163 448 aa11.51□□□□□ -0.57
AP3B1-206ENST00000520122 CCDC24Q8N4L8 307 aa11.51□□□□□ -0.57
AP3B1-206ENST00000520122 USP46P62068 366 aa11.49□□□□□ -0.57
AP3B1-206ENST00000520122 MDM2Q00987 491 aaPredicted RBP11.49□□□□□ -0.57
AP3B1-206ENST00000520122 MRGPRX2Q96LB1 330 aa11.49□□□□□ -0.57
AP3B1-206ENST00000520122 WFS1O76024 890 aa11.48□□□□□ -0.57
AP3B1-206ENST00000520122 DXOO77932 396 aaKnown RBP11.47□□□□□ -0.57
AP3B1-206ENST00000520122 SMPD1P17405 629 aa11.47□□□□□ -0.57
AP3B1-206ENST00000520122 REPIN1Q9BWE0 567 aaKnown RBP11.47□□□□□ -0.57
AP3B1-206ENST00000520122 IRF6O14896 467 aa11.46□□□□□ -0.57
AP3B1-206ENST00000520122 J3QL48 77 aa11.44□□□□□ -0.58
AP3B1-206ENST00000520122 ATP13A2Q9NQ11 1180 aa11.44□□□□□ -0.58
AP3B1-206ENST00000520122 MINK1Q8N4C8 1332 aaPredicted RBP11.43□□□□□ -0.58
AP3B1-206ENST00000520122 LCE2AQ5TA79 106 aaPredicted RBP11.43□□□□□ -0.58
AP3B1-206ENST00000520122 HLA-CQ95604 372 aa11.43□□□□□ -0.58
AP3B1-206ENST00000520122 SENP2Q9HC62 589 aa11.43□□□□□ -0.58
AP3B1-206ENST00000520122 HOXA2O43364 376 aa11.42□□□□□ -0.58
AP3B1-206ENST00000520122 RC3H1Q5TC82 1133 aaKnown RBP11.42□□□□□ -0.58
AP3B1-206ENST00000520122 KRI1Q8N9T8 703 aaKnown RBP11.42□□□□□ -0.58
AP3B1-206ENST00000520122 WNT7BP56706 349 aa11.4□□□□□ -0.58
AP3B1-206ENST00000520122 NUTM1Q86Y26 1132 aa11.4□□□□□ -0.58
AP3B1-206ENST00000520122 HPS1Q92902 700 aa11.39□□□□□ -0.59
AP3B1-206ENST00000520122 CCDC102AQ96A19 550 aa11.39□□□□□ -0.59
AP3B1-206ENST00000520122 KDM2AQ9Y2K7 1162 aa11.39□□□□□ -0.59
AP3B1-206ENST00000520122 JUNDP17535 347 aa11.38□□□□□ -0.59
AP3B1-206ENST00000520122 CLCN1P35523 988 aa11.38□□□□□ -0.59
AP3B1-206ENST00000520122 GUCA2AQ02747 115 aa11.38□□□□□ -0.59
AP3B1-206ENST00000520122 GPCPD1Q9NPB8 672 aa11.38□□□□□ -0.59
AP3B1-206ENST00000520122 SNRPBP14678 240 aaKnown RBP11.37□□□□□ -0.59
AP3B1-206ENST00000520122 NFX1Q12986 1120 aaKnown RBP11.37□□□□□ -0.59
AP3B1-206ENST00000520122 TRIM47Q96LD4 638 aa11.37□□□□□ -0.59
AP3B1-206ENST00000520122 ALDH1A1P00352 501 aa11.36□□□□□ -0.59
AP3B1-206ENST00000520122 SKOR1P84550 965 aa11.36□□□□□ -0.59
AP3B1-206ENST00000520122 KIFC2Q96AC6 838 aa11.36□□□□□ -0.59
AP3B1-206ENST00000520122 SYMPKQ92797 1274 aaKnown RBP11.35□□□□□ -0.59
AP3B1-206ENST00000520122 INSM1Q01101 510 aaPredicted RBP11.34□□□□□ -0.59
AP3B1-206ENST00000520122 NUDT12Q9BQG2 462 aa11.34□□□□□ -0.59
AP3B1-206ENST00000520122 FAM217BQ9NTX9 383 aaPredicted RBP11.34□□□□□ -0.59
AP3B1-206ENST00000520122 RETREG3Q86VR2 466 aa11.33□□□□□ -0.6
AP3B1-206ENST00000520122 EHBP1Q8NDI1 1231 aa11.33□□□□□ -0.6
AP3B1-206ENST00000520122 TERTO14746 1132 aaKnown RBP11.32□□□□□ -0.6
AP3B1-206ENST00000520122 STK17AQ9UEE5 414 aa11.32□□□□□ -0.6
AP3B1-206ENST00000520122 C6orf229H3BNL8 230 aa11.31□□□□□ -0.6
AP3B1-206ENST00000520122 WASF2Q9Y6W5 498 aa11.31□□□□□ -0.6
AP3B1-206ENST00000520122 FDX1P10109 184 aa11.3□□□□□ -0.6
AP3B1-206ENST00000520122 WIPF1O43516 503 aa11.29□□□□□ -0.6
AP3B1-206ENST00000520122 MS4A1P11836 297 aa11.28□□□□□ -0.6
AP3B1-206ENST00000520122 PTCRAQ6ISU1 281 aaPredicted RBP11.27□□□□□ -0.61
AP3B1-206ENST00000520122 CCNYL3P0C7X3 344 aa11.26□□□□□ -0.61
AP3B1-206ENST00000520122 VSIG10Q8N0Z9 540 aa11.26□□□□□ -0.61
AP3B1-206ENST00000520122 SLC16A10Q8TF71 515 aa11.26□□□□□ -0.61
AP3B1-206ENST00000520122 CAPN5O15484 640 aaPredicted RBP11.24□□□□□ -0.61
AP3B1-206ENST00000520122 SIAH2O43255 324 aa11.23□□□□□ -0.61
AP3B1-206ENST00000520122 SSTR3P32745 418 aaPredicted RBP11.23□□□□□ -0.61
AP3B1-206ENST00000520122 PCDHGC3Q9UN70 934 aa11.23□□□□□ -0.61
AP3B1-206ENST00000520122 BMP1P13497 986 aa11.22□□□□□ -0.61
AP3B1-206ENST00000520122 TTLL12Q14166 644 aaPredicted RBP11.22□□□□□ -0.61
AP3B1-206ENST00000520122 SH3BP2P78314 561 aa11.21□□□□□ -0.61
AP3B1-206ENST00000520122 PTPRNQ16849 979 aa11.21□□□□□ -0.61
AP3B1-206ENST00000520122 SPIRE2Q8WWL2 714 aa11.21□□□□□ -0.61
AP3B1-206ENST00000520122 LINC01559Q495D7 138 aa11.2□□□□□ -0.62
AP3B1-206ENST00000520122 UNC93B1Q9H1C4 597 aa11.2□□□□□ -0.62
AP3B1-206ENST00000520122 NXF1Q9UBU9 619 aaKnown RBP11.2□□□□□ -0.62
AP3B1-206ENST00000520122 NDUFV2P19404 249 aa11.19□□□□□ -0.62
AP3B1-206ENST00000520122 PRR7Q8TB68 274 aa11.19□□□□□ -0.62
AP3B1-206ENST00000520122 TRIM46Q7Z4K8 759 aa11.18□□□□□ -0.62
AP3B1-206ENST00000520122 BAP1Q92560 729 aa11.18□□□□□ -0.62
AP3B1-206ENST00000520122 EVA1BQ9NVM1 165 aa11.18□□□□□ -0.62
AP3B1-206ENST00000520122 PLEKHG3A1L390 1219 aa11.17□□□□□ -0.62
AP3B1-206ENST00000520122 MOXD2PA6NHM9 499 aa11.17□□□□□ -0.62
AP3B1-206ENST00000520122 KCNH2Q12809 1159 aa11.17□□□□□ -0.62
AP3B1-206ENST00000520122 LCE2CQ5TA81 110 aa11.17□□□□□ -0.62
AP3B1-206ENST00000520122 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.17□□□□□ -0.62
AP3B1-206ENST00000520122 FAM181BA6NEQ2 426 aa11.16□□□□□ -0.62
AP3B1-206ENST00000520122 MTMR2Q13614 643 aa11.16□□□□□ -0.62
AP3B1-206ENST00000520122 SPDYE5A6NIY4 337 aa11.15□□□□□ -0.62
AP3B1-206ENST00000520122 IRF7Q92985 503 aa11.15□□□□□ -0.62
AP3B1-206ENST00000520122 TLL2Q9Y6L7 1015 aa11.15□□□□□ -0.62
AP3B1-206ENST00000520122 VARSP26640 1264 aaKnown RBP11.14□□□□□ -0.63
AP3B1-206ENST00000520122 CTHP32929 405 aa11.13□□□□□ -0.63
AP3B1-206ENST00000520122 ZNF511Q8NB15 262 aa11.13□□□□□ -0.63
AP3B1-206ENST00000520122 NPAS3Q8IXF0 933 aa11.12□□□□□ -0.63
AP3B1-206ENST00000520122 VEGFBP49765 207 aa11.11□□□□□ -0.63
AP3B1-206ENST00000520122 NNTQ13423 1086 aa11.11□□□□□ -0.63
AP3B1-206ENST00000520122 SCARF1Q14162 830 aa11.11□□□□□ -0.63
AP3B1-206ENST00000520122 DESI1Q6ICB0 168 aa11.11□□□□□ -0.63
AP3B1-206ENST00000520122 GIGYF2Q6Y7W6 1299 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms