RNA–Protein interactions for RNA: ENST00000520058.1

SREK1-207, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-207ENST00000520058 TRAK1Q9UPV9 953 aa26.43■■□□□ 1.82
SREK1-207ENST00000520058 TONSLQ96HA7 1378 aa26.43■■□□□ 1.82
SREK1-207ENST00000520058 PRAM1Q96QH2 718 aa26.42■■□□□ 1.82
SREK1-207ENST00000520058 BRINP3Q76B58 766 aa26.4■■□□□ 1.82
SREK1-207ENST00000520058 AHDC1Q5TGY3 1603 aaPredicted RBP26.39■■□□□ 1.82
SREK1-207ENST00000520058 ARHGEF28Q8N1W1 1705 aaKnown RBP26.39■■□□□ 1.82
SREK1-207ENST00000520058 C1orf167Q5SNV9 1468 aa26.39■■□□□ 1.82
SREK1-207ENST00000520058 PLEKHH1Q9ULM0 1364 aa26.39■■□□□ 1.82
SREK1-207ENST00000520058 FMN2Q9NZ56 1722 aa26.37■■□□□ 1.81
SREK1-207ENST00000520058 NHSL1Q5SYE7 1610 aa26.36■■□□□ 1.81
SREK1-207ENST00000520058 SAFB2Q14151 953 aaKnown RBP eCLIP26.36■■□□□ 1.81
SREK1-207ENST00000520058 TRPM1Q7Z4N2 1603 aa26.35■■□□□ 1.81
SREK1-207ENST00000520058 COL16A1Q07092 1604 aaPredicted RBP26.33■■□□□ 1.81
SREK1-207ENST00000520058 CLSPNQ9HAW4 1339 aa26.32■■□□□ 1.8
SREK1-207ENST00000520058 RGPD8O14715 1765 aaPredicted RBP26.31■■□□□ 1.8
SREK1-207ENST00000520058 ESCO1Q5FWF5 840 aa26.31■■□□□ 1.8
SREK1-207ENST00000520058 ADGRB2O60241 1585 aa26.31■■□□□ 1.8
SREK1-207ENST00000520058 EIF3AQ14152 1382 aaKnown RBP26.31■■□□□ 1.8
SREK1-207ENST00000520058 JCADQ9P266 1359 aa26.31■■□□□ 1.8
SREK1-207ENST00000520058 NBPF1Q3BBV0 1214 aa26.3■■□□□ 1.8
SREK1-207ENST00000520058 KIF1AQ12756 1690 aa26.29■■□□□ 1.8
SREK1-207ENST00000520058 DISP3Q9P2K9 1392 aa26.29■■□□□ 1.8
SREK1-207ENST00000520058 ROCK2O75116 1388 aaKnown RBP26.28■■□□□ 1.8
SREK1-207ENST00000520058 NUTM2FA1L443 756 aa26.27■■□□□ 1.8
SREK1-207ENST00000520058 LRRC59Q96AG4 307 aaKnown RBP26.27■■□□□ 1.8
SREK1-207ENST00000520058 ORAI2Q96SN7 254 aa26.27■■□□□ 1.8
SREK1-207ENST00000520058 MINK1Q8N4C8 1332 aaPredicted RBP26.27■■□□□ 1.8
SREK1-207ENST00000520058 MED1Q15648 1581 aaPredicted RBP26.27■■□□□ 1.8
SREK1-207ENST00000520058 SHPRHQ149N8 1683 aa26.26■■□□□ 1.79
SREK1-207ENST00000520058 NPHP3Q7Z494 1330 aa26.25■■□□□ 1.79
SREK1-207ENST00000520058 HIRIP3Q9BW71 556 aaPredicted RBP26.24■■□□□ 1.79
SREK1-207ENST00000520058 ANKARQ7Z5J8 1434 aa26.22■■□□□ 1.79
SREK1-207ENST00000520058 ITSN1Q15811 1721 aa26.22■■□□□ 1.79
SREK1-207ENST00000520058 CCER1Q8TC90 406 aaPredicted RBP26.22■■□□□ 1.79
SREK1-207ENST00000520058 PHF23Q9BUL5 403 aaPredicted RBP26.22■■□□□ 1.79
SREK1-207ENST00000520058 QRICH2Q9H0J4 1663 aa26.22■■□□□ 1.79
SREK1-207ENST00000520058 SPATA31A6Q5VVP1 1343 aa26.21■■□□□ 1.79
SREK1-207ENST00000520058 CENPJQ9HC77 1338 aaPredicted RBP26.21■■□□□ 1.79
SREK1-207ENST00000520058 WASLO00401 505 aaPredicted RBP26.21■■□□□ 1.79
SREK1-207ENST00000520058 TIMELESSQ9UNS1 1208 aa26.2■■□□□ 1.78
SREK1-207ENST00000520058 TULP4Q9NRJ4 1543 aa26.19■■□□□ 1.78
SREK1-207ENST00000520058 NBPF8Q3BBV2 869 aa26.18■■□□□ 1.78
SREK1-207ENST00000520058 DDX17Q92841 729 aaKnown RBP26.18■■□□□ 1.78
SREK1-207ENST00000520058 PHF8Q9UPP1 1060 aa26.18■■□□□ 1.78
SREK1-207ENST00000520058 SOS2Q07890 1332 aaPredicted RBP26.17■■□□□ 1.78
SREK1-207ENST00000520058 FOXO3O43524 673 aa26.17■■□□□ 1.78
SREK1-207ENST00000520058 USP32Q8NFA0 1604 aa26.15■■□□□ 1.78
SREK1-207ENST00000520058 CARD11Q9BXL7 1154 aa26.15■■□□□ 1.78
SREK1-207ENST00000520058 RALGAPBQ86X10 1494 aa26.15■■□□□ 1.78
SREK1-207ENST00000520058 PSME1Q06323 249 aa26.14■■□□□ 1.78
SREK1-207ENST00000520058 GPRASP1Q5JY77 1395 aa26.13■■□□□ 1.77
SREK1-207ENST00000520058 MEX3CQ5U5Q3 659 aaKnown RBP26.12■■□□□ 1.77
SREK1-207ENST00000520058 CDK19Q9BWU1 502 aa26.12■■□□□ 1.77
SREK1-207ENST00000520058 PXDNQ92626 1479 aa26.1■■□□□ 1.77
SREK1-207ENST00000520058 SRPK2P78362 688 aaKnown RBP26.09■■□□□ 1.77
SREK1-207ENST00000520058 PNPLA6Q8IY17 1366 aa26.08■■□□□ 1.77
SREK1-207ENST00000520058 KRT28Q7Z3Y7 464 aa26.08■■□□□ 1.77
SREK1-207ENST00000520058 NUDT16Q96DE0 195 aaKnown RBP26.08■■□□□ 1.77
SREK1-207ENST00000520058 NUTM2BA6NNL0 878 aaPredicted RBP26.07■■□□□ 1.76
SREK1-207ENST00000520058 NUTM2EB1AL46 878 aaPredicted RBP26.07■■□□□ 1.76
SREK1-207ENST00000520058 XPCQ01831 940 aaPredicted RBP26.07■■□□□ 1.76
SREK1-207ENST00000520058 NUTM2AQ8IVF1 878 aaPredicted RBP26.07■■□□□ 1.76
SREK1-207ENST00000520058 PMFBP1Q8TBY8 1022 aa26.07■■□□□ 1.76
SREK1-207ENST00000520058 EVC2Q86UK5 1308 aa26.07■■□□□ 1.76
SREK1-207ENST00000520058 NGDNQ8NEJ9 315 aaKnown RBP26.06■■□□□ 1.76
SREK1-207ENST00000520058 CCDC61Q9Y6R9 512 aa26.05■■□□□ 1.76
SREK1-207ENST00000520058 COL22A1Q8NFW1 1626 aaPredicted RBP26.05■■□□□ 1.76
SREK1-207ENST00000520058 PRR36Q9H6K5 1346 aa26.05■■□□□ 1.76
SREK1-207ENST00000520058 ATP7BP35670 1465 aa26.04■■□□□ 1.76
SREK1-207ENST00000520058 TOPAZ1Q8N9V7 1692 aa26.03■■□□□ 1.76
SREK1-207ENST00000520058 SBNO1A3KN83 1393 aa26.01■■□□□ 1.75
SREK1-207ENST00000520058 SLC24A1O60721 1099 aa26.01■■□□□ 1.75
SREK1-207ENST00000520058 SPATA31A3Q5VYP0 1347 aa26■■□□□ 1.75
SREK1-207ENST00000520058 LRP6O75581 1613 aa25.99■■□□□ 1.75
SREK1-207ENST00000520058 TNS3Q68CZ2 1445 aa25.99■■□□□ 1.75
SREK1-207ENST00000520058 SBNO2Q9Y2G9 1366 aa25.99■■□□□ 1.75
SREK1-207ENST00000520058 LMOD2Q6P5Q4 547 aa25.99■■□□□ 1.75
SREK1-207ENST00000520058 CABP2Q9NPB3 220 aa25.99■■□□□ 1.75
SREK1-207ENST00000520058 ARHGEF10O15013 1369 aa25.98■■□□□ 1.75
SREK1-207ENST00000520058 MARF1Q9Y4F3 1742 aaKnown RBP25.98■■□□□ 1.75
SREK1-207ENST00000520058 TRPM3Q9HCF6 1732 aaPredicted RBP25.96■■□□□ 1.75
SREK1-207ENST00000520058 PPIP5K1Q6PFW1 1433 aa25.96■■□□□ 1.75
SREK1-207ENST00000520058 PLEKHG3A1L390 1219 aa25.95■■□□□ 1.74
SREK1-207ENST00000520058 HAP1P54257 671 aaPredicted RBP25.95■■□□□ 1.74
SREK1-207ENST00000520058 ZNF772Q68DY9 489 aaPredicted RBP25.95■■□□□ 1.74
SREK1-207ENST00000520058 PAK3O75914 559 aaPredicted RBP25.94■■□□□ 1.74
SREK1-207ENST00000520058 ACEP12821 1306 aa25.92■■□□□ 1.74
SREK1-207ENST00000520058 ADAMTS2O95450 1211 aa25.92■■□□□ 1.74
SREK1-207ENST00000520058 POLR3AO14802 1390 aaPredicted RBP25.92■■□□□ 1.74
SREK1-207ENST00000520058 ATAD2Q6PL18 1390 aa25.92■■□□□ 1.74
SREK1-207ENST00000520058 ALS2Q96Q42 1657 aa25.91■■□□□ 1.74
SREK1-207ENST00000520058 C8orf37Q96NL8 207 aa25.91■■□□□ 1.74
SREK1-207ENST00000520058 NGLY1Q96IV0 654 aa25.9■■□□□ 1.74
SREK1-207ENST00000520058 ST20-MTHFSA0A0A6YYL1 179 aa25.88■■□□□ 1.73
SREK1-207ENST00000520058 BRD4O60885 1362 aaPredicted RBP25.87■■□□□ 1.73
SREK1-207ENST00000520058 USP47Q96K76 1375 aa25.87■■□□□ 1.73
SREK1-207ENST00000520058 CABP1Q9NZU7 370 aa25.87■■□□□ 1.73
SREK1-207ENST00000520058 RGS17Q9UGC6 210 aaPredicted RBP25.87■■□□□ 1.73
SREK1-207ENST00000520058 AFF2P51816 1311 aa25.86■■□□□ 1.73
SREK1-207ENST00000520058 ABCA3Q99758 1704 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms