RNA–Protein interactions for RNA: ENST00000519770.1

IGHV3-52-201, Transcript of immunoglobulin heavy variable 3-52 (pseudogene), humanhuman

BASIC

Gene IGHV3-52, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-52-201ENST00000519770 C14orf37Q86TY3 774 aa24.36■■□□□ 1.49
IGHV3-52-201ENST00000519770 CCDC7Q96M83 1385 aa24.35■■□□□ 1.49
IGHV3-52-201ENST00000519770 PLEKHH1Q9ULM0 1364 aa24.35■■□□□ 1.49
IGHV3-52-201ENST00000519770 NWD1Q149M9 1564 aa24.34■■□□□ 1.49
IGHV3-52-201ENST00000519770 NKTRP30414 1462 aaKnown RBP24.34■■□□□ 1.49
IGHV3-52-201ENST00000519770 KIF7Q2M1P5 1343 aa24.34■■□□□ 1.49
IGHV3-52-201ENST00000519770 SRPK2P78362 688 aaKnown RBP24.33■■□□□ 1.49
IGHV3-52-201ENST00000519770 WASHC2AQ641Q2 1341 aa24.33■■□□□ 1.48
IGHV3-52-201ENST00000519770 DISP3Q9P2K9 1392 aa24.32■■□□□ 1.48
IGHV3-52-201ENST00000519770 C11orf95C9JLR9 678 aaPredicted RBP24.31■■□□□ 1.48
IGHV3-52-201ENST00000519770 PUS7Q96PZ0 661 aaKnown RBP24.3■■□□□ 1.48
IGHV3-52-201ENST00000519770 CDK19Q9BWU1 502 aa24.29■■□□□ 1.48
IGHV3-52-201ENST00000519770 WASLO00401 505 aaPredicted RBP24.28■■□□□ 1.48
IGHV3-52-201ENST00000519770 DDX10Q13206 875 aaKnown RBP24.26■■□□□ 1.47
IGHV3-52-201ENST00000519770 ZNF335Q9H4Z2 1342 aaPredicted RBP24.26■■□□□ 1.47
IGHV3-52-201ENST00000519770 CABP2Q9NPB3 220 aa24.25■■□□□ 1.47
IGHV3-52-201ENST00000519770 ATAD2Q6PL18 1390 aa24.25■■□□□ 1.47
IGHV3-52-201ENST00000519770 NCOA3Q9Y6Q9 1424 aa24.24■■□□□ 1.47
IGHV3-52-201ENST00000519770 TMC1Q8TDI8 760 aa24.23■■□□□ 1.47
IGHV3-52-201ENST00000519770 TULP4Q9NRJ4 1543 aa24.23■■□□□ 1.47
IGHV3-52-201ENST00000519770 ADGRB2O60241 1585 aa24.22■■□□□ 1.47
IGHV3-52-201ENST00000519770 RBM33Q96EV2 1170 aaKnown RBP24.22■■□□□ 1.47
IGHV3-52-201ENST00000519770 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.21■■□□□ 1.47
IGHV3-52-201ENST00000519770 ADGRL3Q9HAR2 1447 aa24.21■■□□□ 1.47
IGHV3-52-201ENST00000519770 TMEM94Q12767 1356 aa24.21■■□□□ 1.47
IGHV3-52-201ENST00000519770 C19orf44Q9H6X5 657 aa24.2■■□□□ 1.46
IGHV3-52-201ENST00000519770 NINLQ9Y2I6 1382 aa24.18■■□□□ 1.46
IGHV3-52-201ENST00000519770 ATF3P18847 181 aa24.18■■□□□ 1.46
IGHV3-52-201ENST00000519770 DIEXFQ68CQ4 756 aaKnown RBP24.18■■□□□ 1.46
IGHV3-52-201ENST00000519770 MSH6P52701 1360 aa24.17■■□□□ 1.46
IGHV3-52-201ENST00000519770 STRCP1A6NGW2 1772 aa24.17■■□□□ 1.46
IGHV3-52-201ENST00000519770 NUDT16Q96DE0 195 aaKnown RBP24.17■■□□□ 1.46
IGHV3-52-201ENST00000519770 CCDC61Q9Y6R9 512 aa24.15■■□□□ 1.46
IGHV3-52-201ENST00000519770 CDC42BPGQ6DT37 1551 aa24.14■■□□□ 1.45
IGHV3-52-201ENST00000519770 CADPS2Q86UW7 1296 aa24.14■■□□□ 1.45
IGHV3-52-201ENST00000519770 LRRC7Q96NW7 1537 aa24.14■■□□□ 1.45
IGHV3-52-201ENST00000519770 NALCNQ8IZF0 1738 aa24.13■■□□□ 1.45
IGHV3-52-201ENST00000519770 NUTM2FA1L443 756 aa24.13■■□□□ 1.45
IGHV3-52-201ENST00000519770 TERF2IPQ9NYB0 399 aa24.13■■□□□ 1.45
IGHV3-52-201ENST00000519770 HDGFL2Q7Z4V5 671 aaPredicted RBP24.12■■□□□ 1.45
IGHV3-52-201ENST00000519770 ANKARQ7Z5J8 1434 aa24.11■■□□□ 1.45
IGHV3-52-201ENST00000519770 SLC12A5Q9H2X9 1139 aa24.11■■□□□ 1.45
IGHV3-52-201ENST00000519770 PANK3Q9H999 370 aa24.11■■□□□ 1.45
IGHV3-52-201ENST00000519770 DCCP43146 1447 aa24.1■■□□□ 1.45
IGHV3-52-201ENST00000519770 CABP1Q9NZU7 370 aa24.1■■□□□ 1.45
IGHV3-52-201ENST00000519770 PPIP5K1Q6PFW1 1433 aa24.09■■□□□ 1.45
IGHV3-52-201ENST00000519770 FMN2Q9NZ56 1722 aa24.07■■□□□ 1.44
IGHV3-52-201ENST00000519770 KNSTRNQ9Y448 316 aa24.07■■□□□ 1.44
IGHV3-52-201ENST00000519770 ATP7BP35670 1465 aa24.07■■□□□ 1.44
IGHV3-52-201ENST00000519770 PRR36Q9H6K5 1346 aa24.06■■□□□ 1.44
IGHV3-52-201ENST00000519770 ANKRD36BQ8N2N9 1353 aa24.04■■□□□ 1.44
IGHV3-52-201ENST00000519770 ITSN1Q15811 1721 aa24.04■■□□□ 1.44
IGHV3-52-201ENST00000519770 ESCO1Q5FWF5 840 aa24.04■■□□□ 1.44
IGHV3-52-201ENST00000519770 NGDNQ8NEJ9 315 aaKnown RBP24.04■■□□□ 1.44
IGHV3-52-201ENST00000519770 ZNF692Q9BU19 519 aaPredicted RBP24.04■■□□□ 1.44
IGHV3-52-201ENST00000519770 MYOM1P52179 1685 aa24.03■■□□□ 1.44
IGHV3-52-201ENST00000519770 PLEKHG3A1L390 1219 aa24.03■■□□□ 1.44
IGHV3-52-201ENST00000519770 ANP32CO43423 234 aa24.02■■□□□ 1.44
IGHV3-52-201ENST00000519770 LTBP4Q8N2S1 1624 aa24.02■■□□□ 1.44
IGHV3-52-201ENST00000519770 PHF8Q9UPP1 1060 aa24.01■■□□□ 1.43
IGHV3-52-201ENST00000519770 PMFBP1Q8TBY8 1022 aa24■■□□□ 1.43
IGHV3-52-201ENST00000519770 XIRP1Q702N8 1843 aaKnown RBP23.99■■□□□ 1.43
IGHV3-52-201ENST00000519770 KTN1Q86UP2 1357 aaKnown RBP23.99■■□□□ 1.43
IGHV3-52-201ENST00000519770 ACEP12821 1306 aa23.98■■□□□ 1.43
IGHV3-52-201ENST00000519770 A0A1W2PP64 1363 aa23.98■■□□□ 1.43
IGHV3-52-201ENST00000519770 USP32Q8NFA0 1604 aa23.98■■□□□ 1.43
IGHV3-52-201ENST00000519770 C1orf167Q5SNV9 1468 aa23.97■■□□□ 1.43
IGHV3-52-201ENST00000519770 TOPAZ1Q8N9V7 1692 aa23.96■■□□□ 1.43
IGHV3-52-201ENST00000519770 MST1RQ04912 1400 aa23.96■■□□□ 1.43
IGHV3-52-201ENST00000519770 CGNL1Q0VF96 1302 aa23.96■■□□□ 1.43
IGHV3-52-201ENST00000519770 NSD3Q9BZ95 1437 aa23.95■■□□□ 1.42
IGHV3-52-201ENST00000519770 SLAIN2Q9P270 581 aa23.95■■□□□ 1.42
IGHV3-52-201ENST00000519770 RGPD8O14715 1765 aaPredicted RBP23.94■■□□□ 1.42
IGHV3-52-201ENST00000519770 PER1O15534 1290 aaPredicted RBP23.94■■□□□ 1.42
IGHV3-52-201ENST00000519770 PSME1Q06323 249 aa23.94■■□□□ 1.42
IGHV3-52-201ENST00000519770 CNGB1Q14028 1251 aaPredicted RBP23.93■■□□□ 1.42
IGHV3-52-201ENST00000519770 ORAI2Q96SN7 254 aa23.93■■□□□ 1.42
IGHV3-52-201ENST00000519770 CARD14Q9BXL6 1004 aa23.93■■□□□ 1.42
IGHV3-52-201ENST00000519770 CPSF1Q10570 1443 aaKnown RBP23.93■■□□□ 1.42
IGHV3-52-201ENST00000519770 POLR3AO14802 1390 aaPredicted RBP23.92■■□□□ 1.42
IGHV3-52-201ENST00000519770 TOM1O60784 492 aa23.91■■□□□ 1.42
IGHV3-52-201ENST00000519770 CD163L1Q9NR16 1453 aa23.91■■□□□ 1.42
IGHV3-52-201ENST00000519770 EDC4Q6P2E9 1401 aaKnown RBP23.91■■□□□ 1.42
IGHV3-52-201ENST00000519770 KIF1AQ12756 1690 aa23.9■■□□□ 1.42
IGHV3-52-201ENST00000519770 CC2D1BQ5T0F9 858 aaKnown RBP23.89■■□□□ 1.41
IGHV3-52-201ENST00000519770 BRD4O60885 1362 aaPredicted RBP23.89■■□□□ 1.41
IGHV3-52-201ENST00000519770 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.88■■□□□ 1.41
IGHV3-52-201ENST00000519770 NSD2O96028 1365 aa23.88■■□□□ 1.41
IGHV3-52-201ENST00000519770 NPC1L1Q9UHC9 1359 aa23.88■■□□□ 1.41
IGHV3-52-201ENST00000519770 AKAP12Q02952 1782 aa23.88■■□□□ 1.41
IGHV3-52-201ENST00000519770 USP6P35125 1406 aa23.87■■□□□ 1.41
IGHV3-52-201ENST00000519770 FOXO3O43524 673 aa23.87■■□□□ 1.41
IGHV3-52-201ENST00000519770 RALBP1Q15311 655 aa23.87■■□□□ 1.41
IGHV3-52-201ENST00000519770 IQSEC2Q5JU85 1478 aa23.87■■□□□ 1.41
IGHV3-52-201ENST00000519770 NPHP3Q7Z494 1330 aa23.86■■□□□ 1.41
IGHV3-52-201ENST00000519770 TTC21AQ8NDW8 1320 aa23.86■■□□□ 1.41
IGHV3-52-201ENST00000519770 PAK3O75914 559 aaPredicted RBP23.86■■□□□ 1.41
IGHV3-52-201ENST00000519770 AMER1Q5JTC6 1135 aaPredicted RBP23.86■■□□□ 1.41
IGHV3-52-201ENST00000519770 CERKQ8TCT0 537 aa23.86■■□□□ 1.41
IGHV3-52-201ENST00000519770 TTC21BQ7Z4L5 1316 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms