RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 CENPJQ9HC77 1338 aaPredicted RBP19.89■□□□□ 0.77
SDC2-203ENST00000519587 ROBO2Q9HCK4 1378 aa19.89■□□□□ 0.77
SDC2-203ENST00000519587 POGKQ9P215 609 aa19.89■□□□□ 0.77
SDC2-203ENST00000519587 PRAM1Q96QH2 718 aa19.87■□□□□ 0.77
SDC2-203ENST00000519587 SBNO2Q9Y2G9 1366 aa19.86■□□□□ 0.77
SDC2-203ENST00000519587 SLC24A1O60721 1099 aa19.85■□□□□ 0.77
SDC2-203ENST00000519587 ADGRB2O60241 1585 aa19.85■□□□□ 0.77
SDC2-203ENST00000519587 NALCNQ8IZF0 1738 aa19.85■□□□□ 0.77
SDC2-203ENST00000519587 HSPA5P11021 654 aaKnown RBP19.84■□□□□ 0.77
SDC2-203ENST00000519587 PROSER2Q86WR7 435 aaPredicted RBP19.84■□□□□ 0.77
SDC2-203ENST00000519587 NCOA3Q9Y6Q9 1424 aa19.84■□□□□ 0.77
SDC2-203ENST00000519587 ST20-MTHFSA0A0A6YYL1 179 aa19.83■□□□□ 0.77
SDC2-203ENST00000519587 ADGRL3Q9HAR2 1447 aa19.83■□□□□ 0.76
SDC2-203ENST00000519587 PLEKHH1Q9ULM0 1364 aa19.82■□□□□ 0.76
SDC2-203ENST00000519587 LRRC7Q96NW7 1537 aa19.81■□□□□ 0.76
SDC2-203ENST00000519587 CDC42BPGQ6DT37 1551 aa19.81■□□□□ 0.76
SDC2-203ENST00000519587 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.81■□□□□ 0.76
SDC2-203ENST00000519587 XIRP1Q702N8 1843 aaKnown RBP19.81■□□□□ 0.76
SDC2-203ENST00000519587 SAFB2Q14151 953 aaKnown RBP eCLIP19.8■□□□□ 0.76
SDC2-203ENST00000519587 WAPLQ7Z5K2 1190 aa19.8■□□□□ 0.76
SDC2-203ENST00000519587 C14orf37Q86TY3 774 aa19.8■□□□□ 0.76
SDC2-203ENST00000519587 TMEM94Q12767 1356 aa19.8■□□□□ 0.76
SDC2-203ENST00000519587 MINK1Q8N4C8 1332 aaPredicted RBP19.77■□□□□ 0.76
SDC2-203ENST00000519587 DCCP43146 1447 aa19.77■□□□□ 0.76
SDC2-203ENST00000519587 EVC2Q86UK5 1308 aa19.76■□□□□ 0.75
SDC2-203ENST00000519587 TULP4Q9NRJ4 1543 aa19.76■□□□□ 0.75
SDC2-203ENST00000519587 MSH6P52701 1360 aa19.76■□□□□ 0.75
SDC2-203ENST00000519587 TMF1P82094 1093 aa19.76■□□□□ 0.75
SDC2-203ENST00000519587 RGS17Q9UGC6 210 aaPredicted RBP19.76■□□□□ 0.75
SDC2-203ENST00000519587 CDCA8Q53HL2 280 aa19.75■□□□□ 0.75
SDC2-203ENST00000519587 TESK2Q96S53 571 aa19.75■□□□□ 0.75
SDC2-203ENST00000519587 FMN2Q9NZ56 1722 aa19.75■□□□□ 0.75
SDC2-203ENST00000519587 ITSN1Q15811 1721 aa19.73■□□□□ 0.75
SDC2-203ENST00000519587 HIRIP3Q9BW71 556 aaPredicted RBP19.72■□□□□ 0.75
SDC2-203ENST00000519587 C19orf44Q9H6X5 657 aa19.72■□□□□ 0.75
SDC2-203ENST00000519587 WASLO00401 505 aaPredicted RBP19.7■□□□□ 0.74
SDC2-203ENST00000519587 RBM33Q96EV2 1170 aaKnown RBP19.7■□□□□ 0.74
SDC2-203ENST00000519587 ATF3P18847 181 aa19.69■□□□□ 0.74
SDC2-203ENST00000519587 SRPK2P78362 688 aaKnown RBP19.69■□□□□ 0.74
SDC2-203ENST00000519587 ATAD2Q6PL18 1390 aa19.69■□□□□ 0.74
SDC2-203ENST00000519587 ANKARQ7Z5J8 1434 aa19.68■□□□□ 0.74
SDC2-203ENST00000519587 CADPS2Q86UW7 1296 aa19.68■□□□□ 0.74
SDC2-203ENST00000519587 PUS7Q96PZ0 661 aaKnown RBP19.67■□□□□ 0.74
SDC2-203ENST00000519587 CDK19Q9BWU1 502 aa19.67■□□□□ 0.74
SDC2-203ENST00000519587 TOPAZ1Q8N9V7 1692 aa19.67■□□□□ 0.74
SDC2-203ENST00000519587 ATP7BP35670 1465 aa19.66■□□□□ 0.74
SDC2-203ENST00000519587 NINLQ9Y2I6 1382 aa19.65■□□□□ 0.74
SDC2-203ENST00000519587 USP32Q8NFA0 1604 aa19.65■□□□□ 0.74
SDC2-203ENST00000519587 ZNF316A6NFI3 1004 aaPredicted RBP19.64■□□□□ 0.73
SDC2-203ENST00000519587 MYOM1P52179 1685 aa19.63■□□□□ 0.73
SDC2-203ENST00000519587 KIF1AQ12756 1690 aa19.63■□□□□ 0.73
SDC2-203ENST00000519587 CCDC7Q96M83 1385 aa19.63■□□□□ 0.73
SDC2-203ENST00000519587 RGPD8O14715 1765 aaPredicted RBP19.62■□□□□ 0.73
SDC2-203ENST00000519587 MST1RQ04912 1400 aa19.62■□□□□ 0.73
SDC2-203ENST00000519587 KIF7Q2M1P5 1343 aa19.62■□□□□ 0.73
SDC2-203ENST00000519587 POTEAQ6S8J7 498 aa19.62■□□□□ 0.73
SDC2-203ENST00000519587 CABP2Q9NPB3 220 aa19.62■□□□□ 0.73
SDC2-203ENST00000519587 POLR3GLQ9BT43 218 aa19.61■□□□□ 0.73
SDC2-203ENST00000519587 C1orf167Q5SNV9 1468 aa19.6■□□□□ 0.73
SDC2-203ENST00000519587 NUDT16Q96DE0 195 aaKnown RBP19.59■□□□□ 0.73
SDC2-203ENST00000519587 PPIP5K1Q6PFW1 1433 aa19.59■□□□□ 0.73
SDC2-203ENST00000519587 WASHC2AQ641Q2 1341 aa19.58■□□□□ 0.73
SDC2-203ENST00000519587 CCDC61Q9Y6R9 512 aa19.58■□□□□ 0.72
SDC2-203ENST00000519587 PRR36Q9H6K5 1346 aa19.57■□□□□ 0.72
SDC2-203ENST00000519587 NUTM2FA1L443 756 aa19.57■□□□□ 0.72
SDC2-203ENST00000519587 C11orf95C9JLR9 678 aaPredicted RBP19.57■□□□□ 0.72
SDC2-203ENST00000519587 AKAP12Q02952 1782 aa19.55■□□□□ 0.72
SDC2-203ENST00000519587 TMC1Q8TDI8 760 aa19.55■□□□□ 0.72
SDC2-203ENST00000519587 SLAIN2Q9P270 581 aa19.54■□□□□ 0.72
SDC2-203ENST00000519587 TERF2IPQ9NYB0 399 aa19.53■□□□□ 0.72
SDC2-203ENST00000519587 MON2Q7Z3U7 1717 aa19.52■□□□□ 0.72
SDC2-203ENST00000519587 ESCO1Q5FWF5 840 aa19.52■□□□□ 0.72
SDC2-203ENST00000519587 ROBO1Q9Y6N7 1651 aa19.52■□□□□ 0.71
SDC2-203ENST00000519587 HDGFL2Q7Z4V5 671 aaPredicted RBP19.51■□□□□ 0.71
SDC2-203ENST00000519587 PHF8Q9UPP1 1060 aa19.51■□□□□ 0.71
SDC2-203ENST00000519587 ANKRD36BQ8N2N9 1353 aa19.51■□□□□ 0.71
SDC2-203ENST00000519587 PLEKHG3A1L390 1219 aa19.5■□□□□ 0.71
SDC2-203ENST00000519587 CABP1Q9NZU7 370 aa19.5■□□□□ 0.71
SDC2-203ENST00000519587 POLR3AO14802 1390 aaPredicted RBP19.49■□□□□ 0.71
SDC2-203ENST00000519587 NGDNQ8NEJ9 315 aaKnown RBP19.49■□□□□ 0.71
SDC2-203ENST00000519587 NHSL1Q5SYE7 1610 aa19.49■□□□□ 0.71
SDC2-203ENST00000519587 SLC12A5Q9H2X9 1139 aa19.48■□□□□ 0.71
SDC2-203ENST00000519587 A0A1W2PP64 1363 aa19.47■□□□□ 0.71
SDC2-203ENST00000519587 CPSF1Q10570 1443 aaKnown RBP19.47■□□□□ 0.71
SDC2-203ENST00000519587 NRKQ7Z2Y5 1582 aa19.47■□□□□ 0.71
SDC2-203ENST00000519587 CD163L1Q9NR16 1453 aa19.47■□□□□ 0.71
SDC2-203ENST00000519587 BRINP3Q76B58 766 aa19.46■□□□□ 0.71
SDC2-203ENST00000519587 PMFBP1Q8TBY8 1022 aa19.46■□□□□ 0.71
SDC2-203ENST00000519587 ORAI2Q96SN7 254 aa19.46■□□□□ 0.71
SDC2-203ENST00000519587 ACEP12821 1306 aa19.46■□□□□ 0.71
SDC2-203ENST00000519587 NPHP3Q7Z494 1330 aa19.46■□□□□ 0.71
SDC2-203ENST00000519587 BRD4O60885 1362 aaPredicted RBP19.45■□□□□ 0.7
SDC2-203ENST00000519587 KTN1Q86UP2 1357 aaKnown RBP19.45■□□□□ 0.7
SDC2-203ENST00000519587 ZNF692Q9BU19 519 aaPredicted RBP19.45■□□□□ 0.7
SDC2-203ENST00000519587 AHDC1Q5TGY3 1603 aaPredicted RBP19.44■□□□□ 0.7
SDC2-203ENST00000519587 USP6P35125 1406 aa19.44■□□□□ 0.7
SDC2-203ENST00000519587 EDC4Q6P2E9 1401 aaKnown RBP19.44■□□□□ 0.7
SDC2-203ENST00000519587 KIF20BQ96Q89 1820 aa19.43■□□□□ 0.7
SDC2-203ENST00000519587 DDX10Q13206 875 aaKnown RBP19.42■□□□□ 0.7
SDC2-203ENST00000519587 PANK3Q9H999 370 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms