RNA–Protein interactions for RNA: ENST00000519529.1

CHMP7-206, Transcript of charged multivesicular body protein 7, humanhuman

TSL 3

Gene CHMP7, Length 690 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-206ENST00000519529 CDC42BPGQ6DT37 1551 aa29.53■■■□□ 2.32
CHMP7-206ENST00000519529 WAPLQ7Z5K2 1190 aa29.53■■■□□ 2.32
CHMP7-206ENST00000519529 MYOM2P54296 1465 aa29.53■■■□□ 2.32
CHMP7-206ENST00000519529 YTHDC2Q9H6S0 1430 aaKnown RBP29.52■■■□□ 2.32
CHMP7-206ENST00000519529 ABCC11Q96J66 1382 aa29.52■■■□□ 2.32
CHMP7-206ENST00000519529 NRXN1Q9ULB1 1477 aa29.5■■■□□ 2.31
CHMP7-206ENST00000519529 HRCP23327 699 aa29.49■■■□□ 2.31
CHMP7-206ENST00000519529 C14orf93Q9H972 538 aaKnown RBP29.49■■■□□ 2.31
CHMP7-206ENST00000519529 CFAP70Q5T0N1 1121 aa29.48■■■□□ 2.31
CHMP7-206ENST00000519529 PLEKHH1Q9ULM0 1364 aa29.48■■■□□ 2.31
CHMP7-206ENST00000519529 PNPLA6Q8IY17 1366 aa29.46■■■□□ 2.31
CHMP7-206ENST00000519529 ESCO1Q5FWF5 840 aa29.45■■■□□ 2.31
CHMP7-206ENST00000519529 DHX57Q6P158 1386 aaKnown RBP29.44■■■□□ 2.3
CHMP7-206ENST00000519529 NUTM2FA1L443 756 aa29.44■■■□□ 2.3
CHMP7-206ENST00000519529 FMN2Q9NZ56 1722 aa29.43■■■□□ 2.3
CHMP7-206ENST00000519529 ZNF772Q68DY9 489 aaPredicted RBP29.43■■■□□ 2.3
CHMP7-206ENST00000519529 SOS2Q07890 1332 aaPredicted RBP29.42■■■□□ 2.3
CHMP7-206ENST00000519529 KDM2AQ9Y2K7 1162 aa29.41■■■□□ 2.3
CHMP7-206ENST00000519529 RGPD8O14715 1765 aaPredicted RBP29.4■■■□□ 2.3
CHMP7-206ENST00000519529 DCAF11Q8TEB1 546 aa29.39■■■□□ 2.3
CHMP7-206ENST00000519529 SIRT1Q96EB6 747 aa29.38■■■□□ 2.29
CHMP7-206ENST00000519529 NPHP3Q7Z494 1330 aa29.37■■■□□ 2.29
CHMP7-206ENST00000519529 FOXO3O43524 673 aa29.35■■■□□ 2.29
CHMP7-206ENST00000519529 SAFB2Q14151 953 aaKnown RBP eCLIP29.35■■■□□ 2.29
CHMP7-206ENST00000519529 C8orf37Q96NL8 207 aa29.35■■■□□ 2.29
CHMP7-206ENST00000519529 AFF2P51816 1311 aa29.35■■■□□ 2.29
CHMP7-206ENST00000519529 PRAM1Q96QH2 718 aa29.34■■■□□ 2.29
CHMP7-206ENST00000519529 ADAMTS2O95450 1211 aa29.33■■■□□ 2.29
CHMP7-206ENST00000519529 XPCQ01831 940 aaPredicted RBP29.33■■■□□ 2.29
CHMP7-206ENST00000519529 KIF1AQ12756 1690 aa29.32■■■□□ 2.28
CHMP7-206ENST00000519529 POGKQ9P215 609 aa29.32■■■□□ 2.28
CHMP7-206ENST00000519529 ADGRB1O14514 1584 aa29.31■■■□□ 2.28
CHMP7-206ENST00000519529 DLC1Q96QB1 1528 aa29.31■■■□□ 2.28
CHMP7-206ENST00000519529 PXDNQ92626 1479 aa29.31■■■□□ 2.28
CHMP7-206ENST00000519529 COL22A1Q8NFW1 1626 aaPredicted RBP29.31■■■□□ 2.28
CHMP7-206ENST00000519529 TRAK1Q9UPV9 953 aa29.29■■■□□ 2.28
CHMP7-206ENST00000519529 STAC3Q96MF2 364 aa29.28■■■□□ 2.28
CHMP7-206ENST00000519529 RXRBP28702 533 aa29.27■■■□□ 2.28
CHMP7-206ENST00000519529 NGLY1Q96IV0 654 aa29.27■■■□□ 2.28
CHMP7-206ENST00000519529 MARF1Q9Y4F3 1742 aaKnown RBP29.24■■■□□ 2.27
CHMP7-206ENST00000519529 ADGRB2O60241 1585 aa29.22■■■□□ 2.27
CHMP7-206ENST00000519529 PHF8Q9UPP1 1060 aa29.21■■■□□ 2.27
CHMP7-206ENST00000519529 QTRT2Q9H974 415 aaKnown RBP29.2■■■□□ 2.26
CHMP7-206ENST00000519529 HIRIP3Q9BW71 556 aaPredicted RBP29.19■■■□□ 2.26
CHMP7-206ENST00000519529 ARHGEF28Q8N1W1 1705 aaKnown RBP29.19■■■□□ 2.26
CHMP7-206ENST00000519529 USP32Q8NFA0 1604 aa29.19■■■□□ 2.26
CHMP7-206ENST00000519529 MINK1Q8N4C8 1332 aaPredicted RBP29.19■■■□□ 2.26
CHMP7-206ENST00000519529 KRT28Q7Z3Y7 464 aa29.18■■■□□ 2.26
CHMP7-206ENST00000519529 SPATA31A3Q5VYP0 1347 aa29.16■■■□□ 2.26
CHMP7-206ENST00000519529 CDK12Q9NYV4 1490 aaPredicted RBP29.16■■■□□ 2.26
CHMP7-206ENST00000519529 USP21Q9UK80 565 aa29.15■■■□□ 2.26
CHMP7-206ENST00000519529 KIAA1210Q9ULL0 1709 aa29.14■■■□□ 2.26
CHMP7-206ENST00000519529 ANKARQ7Z5J8 1434 aa29.14■■■□□ 2.26
CHMP7-206ENST00000519529 RBM6P78332 1123 aaKnown RBP29.14■■■□□ 2.26
CHMP7-206ENST00000519529 PSME1Q06323 249 aa29.13■■■□□ 2.25
CHMP7-206ENST00000519529 PMFBP1Q8TBY8 1022 aa29.13■■■□□ 2.25
CHMP7-206ENST00000519529 FNBP4Q8N3X1 1017 aaPredicted RBP29.1■■■□□ 2.25
CHMP7-206ENST00000519529 EIF3AQ14152 1382 aaKnown RBP29.1■■■□□ 2.25
CHMP7-206ENST00000519529 TNS3Q68CZ2 1445 aa29.1■■■□□ 2.25
CHMP7-206ENST00000519529 TULP4Q9NRJ4 1543 aa29.09■■■□□ 2.25
CHMP7-206ENST00000519529 WASLO00401 505 aaPredicted RBP29.08■■■□□ 2.25
CHMP7-206ENST00000519529 LMOD2Q6P5Q4 547 aa29.08■■■□□ 2.25
CHMP7-206ENST00000519529 TRPC5Q9UL62 973 aaPredicted RBP29.08■■■□□ 2.25
CHMP7-206ENST00000519529 RGS12O14924 1447 aa29.08■■■□□ 2.25
CHMP7-206ENST00000519529 PLEKHG5O94827 1062 aa29.07■■■□□ 2.24
CHMP7-206ENST00000519529 HAP1P54257 671 aaPredicted RBP29.06■■■□□ 2.24
CHMP7-206ENST00000519529 ITSN1Q15811 1721 aa29.06■■■□□ 2.24
CHMP7-206ENST00000519529 SBNO1A3KN83 1393 aa29.04■■■□□ 2.24
CHMP7-206ENST00000519529 PRR36Q9H6K5 1346 aa29.04■■■□□ 2.24
CHMP7-206ENST00000519529 ABCA3Q99758 1704 aa29.03■■■□□ 2.24
CHMP7-206ENST00000519529 UPF1Q92900 1129 aaKnown RBP eCLIP29.03■■■□□ 2.24
CHMP7-206ENST00000519529 TRPM3Q9HCF6 1732 aaPredicted RBP29.03■■■□□ 2.24
CHMP7-206ENST00000519529 ATRNO75882 1429 aa29.03■■■□□ 2.24
CHMP7-206ENST00000519529 CABLES1Q8TDN4 633 aa29.02■■■□□ 2.24
CHMP7-206ENST00000519529 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.01■■■□□ 2.23
CHMP7-206ENST00000519529 NBPF1Q3BBV0 1214 aa29.01■■■□□ 2.23
CHMP7-206ENST00000519529 BCL9LQ86UU0 1499 aa29.01■■■□□ 2.23
CHMP7-206ENST00000519529 ARHGEF10O15013 1369 aa29.01■■■□□ 2.23
CHMP7-206ENST00000519529 GPRASP1Q5JY77 1395 aa29■■■□□ 2.23
CHMP7-206ENST00000519529 SIN3AQ96ST3 1273 aa28.98■■■□□ 2.23
CHMP7-206ENST00000519529 ALS2Q96Q42 1657 aa28.97■■■□□ 2.23
CHMP7-206ENST00000519529 NGDNQ8NEJ9 315 aaKnown RBP28.97■■■□□ 2.23
CHMP7-206ENST00000519529 ATP7BP35670 1465 aa28.96■■■□□ 2.23
CHMP7-206ENST00000519529 PLCH1Q4KWH8 1693 aa28.96■■■□□ 2.23
CHMP7-206ENST00000519529 NEUROD1Q13562 356 aa28.95■■■□□ 2.22
CHMP7-206ENST00000519529 L3MBTL2Q969R5 705 aa28.95■■■□□ 2.22
CHMP7-206ENST00000519529 NUDT16Q96DE0 195 aaKnown RBP28.95■■■□□ 2.22
CHMP7-206ENST00000519529 SLIT2O94813 1529 aa28.94■■■□□ 2.22
CHMP7-206ENST00000519529 CDK19Q9BWU1 502 aa28.94■■■□□ 2.22
CHMP7-206ENST00000519529 UNC5CLQ8IV45 518 aa28.93■■■□□ 2.22
CHMP7-206ENST00000519529 NWD2Q9ULI1 1742 aa28.91■■■□□ 2.22
CHMP7-206ENST00000519529 TOPAZ1Q8N9V7 1692 aa28.91■■■□□ 2.22
CHMP7-206ENST00000519529 QRICH2Q9H0J4 1663 aa28.91■■■□□ 2.22
CHMP7-206ENST00000519529 PAK3O75914 559 aaPredicted RBP28.91■■■□□ 2.22
CHMP7-206ENST00000519529 GJD4Q96KN9 370 aaPredicted RBP28.91■■■□□ 2.22
CHMP7-206ENST00000519529 TRPM1Q7Z4N2 1603 aa28.89■■■□□ 2.22
CHMP7-206ENST00000519529 CENPJQ9HC77 1338 aaPredicted RBP28.87■■■□□ 2.21
CHMP7-206ENST00000519529 GLI3P10071 1580 aa28.87■■■□□ 2.21
CHMP7-206ENST00000519529 ATAD2Q6PL18 1390 aa28.86■■■□□ 2.21
CHMP7-206ENST00000519529 CRYBG1Q9Y4K1 1723 aa28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms