RNA–Protein interactions for RNA: ENST00000519381.1

VPS37A-204, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 4

Gene VPS37A, Length 575 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-204ENST00000519381 ADGRF5Q8IZF2 1346 aa23.58■■□□□ 1.36
VPS37A-204ENST00000519381 ACIN1Q9UKV3 1341 aaKnown RBP23.58■■□□□ 1.36
VPS37A-204ENST00000519381 NPHP3Q7Z494 1330 aa23.57■■□□□ 1.36
VPS37A-204ENST00000519381 QTRT2Q9H974 415 aaKnown RBP23.56■■□□□ 1.36
VPS37A-204ENST00000519381 SOS2Q07890 1332 aaPredicted RBP23.56■■□□□ 1.36
VPS37A-204ENST00000519381 RBM6P78332 1123 aaKnown RBP23.55■■□□□ 1.36
VPS37A-204ENST00000519381 UPF1Q92900 1129 aaKnown RBP eCLIP23.55■■□□□ 1.36
VPS37A-204ENST00000519381 IFT172Q9UG01 1749 aa23.55■■□□□ 1.36
VPS37A-204ENST00000519381 SPATA31E1Q6ZUB1 1445 aa23.54■■□□□ 1.36
VPS37A-204ENST00000519381 LRPPRCP42704 1394 aaKnown RBP23.52■■□□□ 1.36
VPS37A-204ENST00000519381 KNDC1Q76NI1 1749 aa23.51■■□□□ 1.35
VPS37A-204ENST00000519381 NUTM2FA1L443 756 aa23.51■■□□□ 1.35
VPS37A-204ENST00000519381 RGS12O14924 1447 aa23.5■■□□□ 1.35
VPS37A-204ENST00000519381 TECPR2O15040 1411 aa23.5■■□□□ 1.35
VPS37A-204ENST00000519381 WAPLQ7Z5K2 1190 aa23.5■■□□□ 1.35
VPS37A-204ENST00000519381 USP21Q9UK80 565 aa23.5■■□□□ 1.35
VPS37A-204ENST00000519381 PIK3C2GO75747 1445 aa23.5■■□□□ 1.35
VPS37A-204ENST00000519381 TMEM132EQ6IEE7 984 aa23.49■■□□□ 1.35
VPS37A-204ENST00000519381 ABCC11Q96J66 1382 aa23.48■■□□□ 1.35
VPS37A-204ENST00000519381 COL22A1Q8NFW1 1626 aaPredicted RBP23.48■■□□□ 1.35
VPS37A-204ENST00000519381 FOXO3O43524 673 aa23.47■■□□□ 1.35
VPS37A-204ENST00000519381 XPCQ01831 940 aaPredicted RBP23.47■■□□□ 1.35
VPS37A-204ENST00000519381 TRPC5Q9UL62 973 aaPredicted RBP23.47■■□□□ 1.35
VPS37A-204ENST00000519381 YTHDC2Q9H6S0 1430 aaKnown RBP23.46■■□□□ 1.35
VPS37A-204ENST00000519381 PXDNQ92626 1479 aa23.44■■□□□ 1.34
VPS37A-204ENST00000519381 KIF1AQ12756 1690 aa23.44■■□□□ 1.34
VPS37A-204ENST00000519381 FMN2Q9NZ56 1722 aa23.42■■□□□ 1.34
VPS37A-204ENST00000519381 DHX57Q6P158 1386 aaKnown RBP23.42■■□□□ 1.34
VPS37A-204ENST00000519381 PLEKHH1Q9ULM0 1364 aa23.42■■□□□ 1.34
VPS37A-204ENST00000519381 MYOM2P54296 1465 aa23.42■■□□□ 1.34
VPS37A-204ENST00000519381 ATAD2Q6PL18 1390 aa23.4■■□□□ 1.34
VPS37A-204ENST00000519381 HAP1P54257 671 aaPredicted RBP23.4■■□□□ 1.34
VPS37A-204ENST00000519381 FNBP4Q8N3X1 1017 aaPredicted RBP23.39■■□□□ 1.33
VPS37A-204ENST00000519381 MARF1Q9Y4F3 1742 aaKnown RBP23.39■■□□□ 1.33
VPS37A-204ENST00000519381 C14orf93Q9H972 538 aaKnown RBP23.38■■□□□ 1.33
VPS37A-204ENST00000519381 RAB3GAP2Q9H2M9 1393 aa23.38■■□□□ 1.33
VPS37A-204ENST00000519381 ATRNO75882 1429 aa23.36■■□□□ 1.33
VPS37A-204ENST00000519381 SAFB2Q14151 953 aaKnown RBP eCLIP23.36■■□□□ 1.33
VPS37A-204ENST00000519381 CFAP70Q5T0N1 1121 aa23.36■■□□□ 1.33
VPS37A-204ENST00000519381 POGKQ9P215 609 aa23.36■■□□□ 1.33
VPS37A-204ENST00000519381 SIRT1Q96EB6 747 aa23.35■■□□□ 1.33
VPS37A-204ENST00000519381 PSME1Q06323 249 aa23.34■■□□□ 1.33
VPS37A-204ENST00000519381 KRT28Q7Z3Y7 464 aa23.34■■□□□ 1.33
VPS37A-204ENST00000519381 NRXN1Q9ULB1 1477 aa23.34■■□□□ 1.33
VPS37A-204ENST00000519381 PRAM1Q96QH2 718 aa23.33■■□□□ 1.33
VPS37A-204ENST00000519381 PHF8Q9UPP1 1060 aa23.33■■□□□ 1.33
VPS37A-204ENST00000519381 SPATA31A3Q5VYP0 1347 aa23.33■■□□□ 1.32
VPS37A-204ENST00000519381 LMOD2Q6P5Q4 547 aa23.32■■□□□ 1.32
VPS37A-204ENST00000519381 PLEKHG5O94827 1062 aa23.31■■□□□ 1.32
VPS37A-204ENST00000519381 TNS3Q68CZ2 1445 aa23.3■■□□□ 1.32
VPS37A-204ENST00000519381 RGPD8O14715 1765 aaPredicted RBP23.29■■□□□ 1.32
VPS37A-204ENST00000519381 USP32Q8NFA0 1604 aa23.29■■□□□ 1.32
VPS37A-204ENST00000519381 BCL9LQ86UU0 1499 aa23.29■■□□□ 1.32
VPS37A-204ENST00000519381 DLC1Q96QB1 1528 aa23.28■■□□□ 1.32
VPS37A-204ENST00000519381 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.28■■□□□ 1.32
VPS37A-204ENST00000519381 GJD4Q96KN9 370 aaPredicted RBP23.27■■□□□ 1.32
VPS37A-204ENST00000519381 EIF3AQ14152 1382 aaKnown RBP23.27■■□□□ 1.31
VPS37A-204ENST00000519381 UNC5CLQ8IV45 518 aa23.26■■□□□ 1.31
VPS37A-204ENST00000519381 KDM2AQ9Y2K7 1162 aa23.26■■□□□ 1.31
VPS37A-204ENST00000519381 ARHGEF10O15013 1369 aa23.26■■□□□ 1.31
VPS37A-204ENST00000519381 ANKARQ7Z5J8 1434 aa23.25■■□□□ 1.31
VPS37A-204ENST00000519381 TRAK1Q9UPV9 953 aa23.25■■□□□ 1.31
VPS37A-204ENST00000519381 CCDC9Q9Y3X0 531 aaKnown RBP23.24■■□□□ 1.31
VPS37A-204ENST00000519381 SBNO1A3KN83 1393 aa23.24■■□□□ 1.31
VPS37A-204ENST00000519381 DCAF11Q8TEB1 546 aa23.23■■□□□ 1.31
VPS37A-204ENST00000519381 ADGRB2O60241 1585 aa23.23■■□□□ 1.31
VPS37A-204ENST00000519381 PMFBP1Q8TBY8 1022 aa23.22■■□□□ 1.31
VPS37A-204ENST00000519381 HIRIP3Q9BW71 556 aaPredicted RBP23.22■■□□□ 1.31
VPS37A-204ENST00000519381 SLIT2O94813 1529 aa23.22■■□□□ 1.31
VPS37A-204ENST00000519381 MINK1Q8N4C8 1332 aaPredicted RBP23.21■■□□□ 1.31
VPS37A-204ENST00000519381 GPRASP1Q5JY77 1395 aa23.21■■□□□ 1.31
VPS37A-204ENST00000519381 RALGAPBQ86X10 1494 aa23.21■■□□□ 1.31
VPS37A-204ENST00000519381 CABLES1Q8TDN4 633 aa23.2■■□□□ 1.3
VPS37A-204ENST00000519381 ADGRB1O14514 1584 aa23.19■■□□□ 1.3
VPS37A-204ENST00000519381 STAC3Q96MF2 364 aa23.19■■□□□ 1.3
VPS37A-204ENST00000519381 CCDC125Q86Z20 511 aa23.18■■□□□ 1.3
VPS37A-204ENST00000519381 PLCH1Q4KWH8 1693 aa23.18■■□□□ 1.3
VPS37A-204ENST00000519381 ABCA3Q99758 1704 aa23.17■■□□□ 1.3
VPS37A-204ENST00000519381 A0A0G2JS52 829 aa23.17■■□□□ 1.3
VPS37A-204ENST00000519381 MYT1Q01538 1121 aa23.17■■□□□ 1.3
VPS37A-204ENST00000519381 ZRANB1Q9UGI0 708 aa23.17■■□□□ 1.3
VPS37A-204ENST00000519381 GLI3P10071 1580 aa23.17■■□□□ 1.3
VPS37A-204ENST00000519381 TULP4Q9NRJ4 1543 aa23.16■■□□□ 1.3
VPS37A-204ENST00000519381 NWD2Q9ULI1 1742 aa23.16■■□□□ 1.3
VPS37A-204ENST00000519381 SF3B2Q13435 895 aaKnown RBP23.14■■□□□ 1.29
VPS37A-204ENST00000519381 NGDNQ8NEJ9 315 aaKnown RBP23.14■■□□□ 1.29
VPS37A-204ENST00000519381 EP400Q96L91 3159 aa23.13■■□□□ 1.29
VPS37A-204ENST00000519381 VPS72Q15906 364 aa23.13■■□□□ 1.29
VPS37A-204ENST00000519381 WASLO00401 505 aaPredicted RBP23.12■■□□□ 1.29
VPS37A-204ENST00000519381 PAK3O75914 559 aaPredicted RBP23.12■■□□□ 1.29
VPS37A-204ENST00000519381 SEPT12Q8IYM1 358 aa23.11■■□□□ 1.29
VPS37A-204ENST00000519381 HRCP23327 699 aa23.1■■□□□ 1.29
VPS37A-204ENST00000519381 ITSN1Q15811 1721 aa23.1■■□□□ 1.29
VPS37A-204ENST00000519381 BLMP54132 1417 aaPredicted RBP23.09■■□□□ 1.29
VPS37A-204ENST00000519381 TRPM3Q9HCF6 1732 aaPredicted RBP23.09■■□□□ 1.29
VPS37A-204ENST00000519381 ARHGEF28Q8N1W1 1705 aaKnown RBP23.08■■□□□ 1.29
VPS37A-204ENST00000519381 BRWD3Q6RI45 1802 aa23.08■■□□□ 1.28
VPS37A-204ENST00000519381 PRR36Q9H6K5 1346 aa23.08■■□□□ 1.28
VPS37A-204ENST00000519381 ALS2Q96Q42 1657 aa23.06■■□□□ 1.28
VPS37A-204ENST00000519381 FAM83GA6ND36 823 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms