RNA–Protein interactions for RNA: ENST00000519339.5

TNIP1-206, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 1 (best)

Gene TNIP1, Length 1,815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-206ENST00000519339 HDGFP51858 240 aaKnown RBP20.47■□□□□ 0.87
TNIP1-206ENST00000519339 NSD2O96028 1365 aa20.46■□□□□ 0.87
TNIP1-206ENST00000519339 UBR1Q8IWV7 1749 aa20.46■□□□□ 0.87
TNIP1-206ENST00000519339 KDM4FA0A1W2PPD8 638 aa20.46■□□□□ 0.87
TNIP1-206ENST00000519339 WDR43Q15061 677 aaKnown RBP eCLIP20.45■□□□□ 0.86
TNIP1-206ENST00000519339 NSD3Q9BZ95 1437 aa20.45■□□□□ 0.86
TNIP1-206ENST00000519339 ATAD2Q6PL18 1390 aa20.45■□□□□ 0.86
TNIP1-206ENST00000519339 BCANQ96GW7 911 aa20.44■□□□□ 0.86
TNIP1-206ENST00000519339 NLRP1Q9C000 1473 aa20.44■□□□□ 0.86
TNIP1-206ENST00000519339 SLC12A5Q9H2X9 1139 aa20.43■□□□□ 0.86
TNIP1-206ENST00000519339 POLR3AO14802 1390 aaPredicted RBP20.43■□□□□ 0.86
TNIP1-206ENST00000519339 CGNL1Q0VF96 1302 aa20.42■□□□□ 0.86
TNIP1-206ENST00000519339 PPP4R2Q9NY27 417 aa20.42■□□□□ 0.86
TNIP1-206ENST00000519339 ADAMTS8Q9UP79 889 aa20.42■□□□□ 0.86
TNIP1-206ENST00000519339 SETD1AO15047 1707 aaKnown RBP20.42■□□□□ 0.86
TNIP1-206ENST00000519339 NGEFQ8N5V2 710 aa20.41■□□□□ 0.86
TNIP1-206ENST00000519339 ABCC11Q96J66 1382 aa20.41■□□□□ 0.86
TNIP1-206ENST00000519339 SIRT1Q96EB6 747 aa20.39■□□□□ 0.85
TNIP1-206ENST00000519339 PRAM1Q96QH2 718 aa20.39■□□□□ 0.85
TNIP1-206ENST00000519339 POGKQ9P215 609 aa20.39■□□□□ 0.85
TNIP1-206ENST00000519339 SETD1BQ9UPS6 1966 aaKnown RBP20.39■□□□□ 0.85
TNIP1-206ENST00000519339 STK26Q9P289 416 aa20.38■□□□□ 0.85
TNIP1-206ENST00000519339 CEP170BQ9Y4F5 1589 aaPredicted RBP20.37■□□□□ 0.85
TNIP1-206ENST00000519339 MORC1Q86VD1 984 aa20.37■□□□□ 0.85
TNIP1-206ENST00000519339 NRXN3Q9Y4C0 1643 aa20.36■□□□□ 0.85
TNIP1-206ENST00000519339 CABP2Q9NPB3 220 aa20.35■□□□□ 0.85
TNIP1-206ENST00000519339 SENP3Q9H4L4 574 aaPredicted RBP20.34■□□□□ 0.85
TNIP1-206ENST00000519339 TMEM2Q9UHN6 1383 aa20.34■□□□□ 0.85
TNIP1-206ENST00000519339 ZNF142P52746 1687 aaPredicted RBP20.34■□□□□ 0.85
TNIP1-206ENST00000519339 TECPR2O15040 1411 aa20.34■□□□□ 0.85
TNIP1-206ENST00000519339 MED14O60244 1454 aa20.34■□□□□ 0.85
TNIP1-206ENST00000519339 SRPK2P78362 688 aaKnown RBP20.34■□□□□ 0.85
TNIP1-206ENST00000519339 TERF2IPQ9NYB0 399 aa20.34■□□□□ 0.85
TNIP1-206ENST00000519339 FAM135BQ49AJ0 1406 aa20.33■□□□□ 0.84
TNIP1-206ENST00000519339 KNDC1Q76NI1 1749 aa20.32■□□□□ 0.84
TNIP1-206ENST00000519339 ZNF521Q96K83 1311 aa20.32■□□□□ 0.84
TNIP1-206ENST00000519339 IRX6P78412 446 aaPredicted RBP20.32■□□□□ 0.84
TNIP1-206ENST00000519339 A0A1W2PP64 1363 aa20.31■□□□□ 0.84
TNIP1-206ENST00000519339 SLIT1O75093 1534 aa20.3■□□□□ 0.84
TNIP1-206ENST00000519339 MINK1Q8N4C8 1332 aaPredicted RBP20.3■□□□□ 0.84
TNIP1-206ENST00000519339 LTKP29376 864 aa20.3■□□□□ 0.84
TNIP1-206ENST00000519339 RCAN3Q9UKA8 241 aa20.3■□□□□ 0.84
TNIP1-206ENST00000519339 ARHGAP23Q9P227 1491 aa20.3■□□□□ 0.84
TNIP1-206ENST00000519339 SAFB2Q14151 953 aaKnown RBP eCLIP20.3■□□□□ 0.84
TNIP1-206ENST00000519339 CD163L1Q9NR16 1453 aa20.29■□□□□ 0.84
TNIP1-206ENST00000519339 CDK19Q9BWU1 502 aa20.28■□□□□ 0.84
TNIP1-206ENST00000519339 NCBP3Q53F19 620 aaKnown RBP20.27■□□□□ 0.84
TNIP1-206ENST00000519339 THEMISQ8N1K5 641 aaPredicted RBP20.27■□□□□ 0.84
TNIP1-206ENST00000519339 ATP7BP35670 1465 aa20.27■□□□□ 0.84
TNIP1-206ENST00000519339 CPS1P31327 1500 aa20.27■□□□□ 0.84
TNIP1-206ENST00000519339 HDGFL2Q7Z4V5 671 aaPredicted RBP20.27■□□□□ 0.84
TNIP1-206ENST00000519339 CFAP53Q96M91 514 aa20.27■□□□□ 0.84
TNIP1-206ENST00000519339 PLEKHG1Q9ULL1 1385 aa20.26■□□□□ 0.83
TNIP1-206ENST00000519339 PLEKHH1Q9ULM0 1364 aa20.26■□□□□ 0.83
TNIP1-206ENST00000519339 RRP1P56182 461 aaKnown RBP20.26■□□□□ 0.83
TNIP1-206ENST00000519339 SALL2Q9Y467 1007 aaPredicted RBP20.26■□□□□ 0.83
TNIP1-206ENST00000519339 METP08581 1390 aa20.26■□□□□ 0.83
TNIP1-206ENST00000519339 TSHZ2Q9NRE2 1034 aa20.25■□□□□ 0.83
TNIP1-206ENST00000519339 ANKRD26Q9UPS8 1709 aa20.25■□□□□ 0.83
TNIP1-206ENST00000519339 GOLGA2Q08379 1002 aa20.25■□□□□ 0.83
TNIP1-206ENST00000519339 CDCA7LQ96GN5 454 aa20.25■□□□□ 0.83
TNIP1-206ENST00000519339 SHPRHQ149N8 1683 aa20.24■□□□□ 0.83
TNIP1-206ENST00000519339 TXNDC2Q86VQ3 553 aa20.24■□□□□ 0.83
TNIP1-206ENST00000519339 SENP3-EIF4A1A0A087X0R7 540 aa20.23■□□□□ 0.83
TNIP1-206ENST00000519339 ADAMTS13Q76LX8 1427 aa20.22■□□□□ 0.83
TNIP1-206ENST00000519339 MTHFSP49914 203 aa20.22■□□□□ 0.83
TNIP1-206ENST00000519339 TRMT2AQ8IZ69 625 aaKnown RBP20.22■□□□□ 0.83
TNIP1-206ENST00000519339 DUSP27Q5VZP5 1158 aa20.21■□□□□ 0.83
TNIP1-206ENST00000519339 WASLO00401 505 aaPredicted RBP20.2■□□□□ 0.82
TNIP1-206ENST00000519339 WAPLQ7Z5K2 1190 aa20.2■□□□□ 0.82
TNIP1-206ENST00000519339 FYB1O15117 783 aa20.2■□□□□ 0.82
TNIP1-206ENST00000519339 APAF1O14727 1248 aa20.19■□□□□ 0.82
TNIP1-206ENST00000519339 SLFN5Q08AF3 891 aa20.19■□□□□ 0.82
TNIP1-206ENST00000519339 CABP1Q9NZU7 370 aa20.19■□□□□ 0.82
TNIP1-206ENST00000519339 RUNDC1Q96C34 613 aa20.18■□□□□ 0.82
TNIP1-206ENST00000519339 EID1Q9Y6B2 187 aa20.18■□□□□ 0.82
TNIP1-206ENST00000519339 CPSF1Q10570 1443 aaKnown RBP20.18■□□□□ 0.82
TNIP1-206ENST00000519339 E9PSI1 815 aa20.17■□□□□ 0.82
TNIP1-206ENST00000519339 ADGRB2O60241 1585 aa20.16■□□□□ 0.82
TNIP1-206ENST00000519339 CCDC146Q8IYE0 955 aa20.16■□□□□ 0.82
TNIP1-206ENST00000519339 IQSEC2Q5JU85 1478 aa20.15■□□□□ 0.82
TNIP1-206ENST00000519339 LMTK3Q96Q04 1460 aa20.15■□□□□ 0.82
TNIP1-206ENST00000519339 TNNT2P45379 298 aaPredicted RBP20.15■□□□□ 0.82
TNIP1-206ENST00000519339 CCDC27Q2M243 656 aa20.15■□□□□ 0.82
TNIP1-206ENST00000519339 KIF20BQ96Q89 1820 aa20.15■□□□□ 0.82
TNIP1-206ENST00000519339 B4GALNT3Q6L9W6 998 aa20.14■□□□□ 0.81
TNIP1-206ENST00000519339 PHF23Q9BUL5 403 aaPredicted RBP20.14■□□□□ 0.81
TNIP1-206ENST00000519339 EDC4Q6P2E9 1401 aaKnown RBP20.14■□□□□ 0.81
TNIP1-206ENST00000519339 DIP2AQ14689 1571 aa20.14■□□□□ 0.81
TNIP1-206ENST00000519339 HSPA2P54652 639 aa20.13■□□□□ 0.81
TNIP1-206ENST00000519339 ANKLE2Q86XL3 938 aa20.13■□□□□ 0.81
TNIP1-206ENST00000519339 SLC26A8Q96RN1 970 aa20.13■□□□□ 0.81
TNIP1-206ENST00000519339 CCDC61Q9Y6R9 512 aa20.13■□□□□ 0.81
TNIP1-206ENST00000519339 PNPLA6Q8IY17 1366 aa20.13■□□□□ 0.81
TNIP1-206ENST00000519339 CDC42BPGQ6DT37 1551 aa20.13■□□□□ 0.81
TNIP1-206ENST00000519339 GGNBP2Q9H3C7 697 aa20.13■□□□□ 0.81
TNIP1-206ENST00000519339 TBX22Q9Y458 520 aa20.13■□□□□ 0.81
TNIP1-206ENST00000519339 PPIP5K1Q6PFW1 1433 aa20.12■□□□□ 0.81
TNIP1-206ENST00000519339 COL3A1P02461 1466 aaPredicted RBP20.12■□□□□ 0.81
TNIP1-206ENST00000519339 NKTRP30414 1462 aaKnown RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms