RNA–Protein interactions for RNA: ENST00000519273.6

ARFGAP1-210, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 2 BASIC

Gene ARFGAP1, Length 3,176 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-210ENST00000519273 PPRC1Q5VV67 1664 aaKnown RBP20.83■□□□□ 0.92
ARFGAP1-210ENST00000519273 POLR3AO14802 1390 aaPredicted RBP20.83■□□□□ 0.92
ARFGAP1-210ENST00000519273 CLUAP1Q96AJ1 413 aa20.81■□□□□ 0.92
ARFGAP1-210ENST00000519273 IL27Q8NEV9 243 aa20.81■□□□□ 0.92
ARFGAP1-210ENST00000519273 RUNDC1Q96C34 613 aa20.81■□□□□ 0.92
ARFGAP1-210ENST00000519273 C14orf93Q9H972 538 aaKnown RBP20.81■□□□□ 0.92
ARFGAP1-210ENST00000519273 CGNL1Q0VF96 1302 aa20.8■□□□□ 0.92
ARFGAP1-210ENST00000519273 PDE3AQ14432 1141 aa20.79■□□□□ 0.92
ARFGAP1-210ENST00000519273 KIDINS220Q9ULH0 1771 aa20.79■□□□□ 0.92
ARFGAP1-210ENST00000519273 RTN4Q9NQC3 1192 aaKnown RBP20.79■□□□□ 0.92
ARFGAP1-210ENST00000519273 NPATQ14207 1427 aa20.78■□□□□ 0.92
ARFGAP1-210ENST00000519273 SEC24BO95487 1268 aa20.78■□□□□ 0.92
ARFGAP1-210ENST00000519273 RLBP1P12271 317 aa20.78■□□□□ 0.92
ARFGAP1-210ENST00000519273 RARSP54136 660 aaKnown RBP20.78■□□□□ 0.92
ARFGAP1-210ENST00000519273 SBNO2Q9Y2G9 1366 aa20.77■□□□□ 0.92
ARFGAP1-210ENST00000519273 NRXN1Q9ULB1 1477 aa20.77■□□□□ 0.92
ARFGAP1-210ENST00000519273 CABP2Q9NPB3 220 aa20.77■□□□□ 0.91
ARFGAP1-210ENST00000519273 NGEFQ8N5V2 710 aa20.76■□□□□ 0.91
ARFGAP1-210ENST00000519273 IFT172Q9UG01 1749 aa20.76■□□□□ 0.91
ARFGAP1-210ENST00000519273 U2AF1L5P0DN76 240 aaPredicted RBP20.75■□□□□ 0.91
ARFGAP1-210ENST00000519273 U2AF1Q01081 240 aaKnown RBP eCLIP20.75■□□□□ 0.918e-11■■□□□ 11.7
ARFGAP1-210ENST00000519273 UBE2Q2Q8WVN8 375 aa20.75■□□□□ 0.91
ARFGAP1-210ENST00000519273 NEURL4Q96JN8 1562 aa20.75■□□□□ 0.91
ARFGAP1-210ENST00000519273 STK26Q9P289 416 aa20.74■□□□□ 0.91
ARFGAP1-210ENST00000519273 ADGRB3O60242 1522 aa20.74■□□□□ 0.91
ARFGAP1-210ENST00000519273 NPM1P06748 294 aaKnown RBP eCLIP20.74■□□□□ 0.91
ARFGAP1-210ENST00000519273 PCDHB15Q9Y5E8 787 aa20.74■□□□□ 0.91
ARFGAP1-210ENST00000519273 ZNF518AQ6AHZ1 1483 aa20.73■□□□□ 0.91
ARFGAP1-210ENST00000519273 CFAP53Q96M91 514 aa20.73■□□□□ 0.91
ARFGAP1-210ENST00000519273 FRAT2O75474 233 aaPredicted RBP20.71■□□□□ 0.91
ARFGAP1-210ENST00000519273 MYO3AQ8NEV4 1616 aa20.71■□□□□ 0.91
ARFGAP1-210ENST00000519273 RAPGEF3O95398 923 aa20.71■□□□□ 0.91
ARFGAP1-210ENST00000519273 SHPRHQ149N8 1683 aa20.71■□□□□ 0.91
ARFGAP1-210ENST00000519273 USP19O94966 1318 aa20.7■□□□□ 0.9
ARFGAP1-210ENST00000519273 QRICH2Q9H0J4 1663 aa20.7■□□□□ 0.9
ARFGAP1-210ENST00000519273 GSE1Q14687 1217 aa20.7■□□□□ 0.9
ARFGAP1-210ENST00000519273 TSR2Q969E8 191 aaKnown RBP20.69■□□□□ 0.9
ARFGAP1-210ENST00000519273 EVC2Q86UK5 1308 aa20.69■□□□□ 0.9
ARFGAP1-210ENST00000519273 ADGRB1O14514 1584 aa20.69■□□□□ 0.9
ARFGAP1-210ENST00000519273 U2SURPO15042 1029 aaKnown RBP20.69■□□□□ 0.9
ARFGAP1-210ENST00000519273 LMTK2Q8IWU2 1503 aa20.68■□□□□ 0.9
ARFGAP1-210ENST00000519273 WDR63Q8IWG1 891 aa20.68■□□□□ 0.9
ARFGAP1-210ENST00000519273 PHF23Q9BUL5 403 aaPredicted RBP20.68■□□□□ 0.9
ARFGAP1-210ENST00000519273 SETBP1Q9Y6X0 1596 aa20.68■□□□□ 0.9
ARFGAP1-210ENST00000519273 CD109Q6YHK3 1445 aa20.67■□□□□ 0.9
ARFGAP1-210ENST00000519273 GGNBP2Q9H3C7 697 aa20.67■□□□□ 0.9
ARFGAP1-210ENST00000519273 MAPK8IP3Q9UPT6 1336 aa20.67■□□□□ 0.9
ARFGAP1-210ENST00000519273 SRPK2P78362 688 aaKnown RBP20.66■□□□□ 0.9
ARFGAP1-210ENST00000519273 IQSEC2Q5JU85 1478 aa20.66■□□□□ 0.9
ARFGAP1-210ENST00000519273 PDZRN3Q9UPQ7 1066 aa20.66■□□□□ 0.9
ARFGAP1-210ENST00000519273 NINLQ9Y2I6 1382 aa20.66■□□□□ 0.9
ARFGAP1-210ENST00000519273 PMFBP1Q8TBY8 1022 aa20.65■□□□□ 0.9
ARFGAP1-210ENST00000519273 PPLO60437 1756 aa20.64■□□□□ 0.9
ARFGAP1-210ENST00000519273 FRMPD1Q5SYB0 1578 aa20.64■□□□□ 0.9
ARFGAP1-210ENST00000519273 VGFO15240 615 aaPredicted RBP20.64■□□□□ 0.89
ARFGAP1-210ENST00000519273 BRPF3Q9ULD4 1205 aa20.64■□□□□ 0.89
ARFGAP1-210ENST00000519273 RPGRIP1LQ68CZ1 1315 aa20.63■□□□□ 0.89
ARFGAP1-210ENST00000519273 POGZQ7Z3K3 1410 aa20.63■□□□□ 0.89
ARFGAP1-210ENST00000519273 SLKQ9H2G2 1235 aaPredicted RBP20.63■□□□□ 0.89
ARFGAP1-210ENST00000519273 MYH16Q9H6N6 1097 aa20.63■□□□□ 0.89
ARFGAP1-210ENST00000519273 IDI1Q13907 227 aa20.62■□□□□ 0.89
ARFGAP1-210ENST00000519273 ANKRD36BQ8N2N9 1353 aa20.62■□□□□ 0.89
ARFGAP1-210ENST00000519273 FTSJ3Q8IY81 847 aaKnown RBP20.62■□□□□ 0.89
ARFGAP1-210ENST00000519273 MINK1Q8N4C8 1332 aaPredicted RBP20.62■□□□□ 0.89
ARFGAP1-210ENST00000519273 ZC3H13Q5T200 1668 aaKnown RBP20.61■□□□□ 0.89
ARFGAP1-210ENST00000519273 TULP4Q9NRJ4 1543 aa20.61■□□□□ 0.89
ARFGAP1-210ENST00000519273 CCDC27Q2M243 656 aa20.6■□□□□ 0.89
ARFGAP1-210ENST00000519273 EXOSC9Q06265 439 aaKnown RBP20.6■□□□□ 0.89
ARFGAP1-210ENST00000519273 GLI2P10070 1586 aa20.6■□□□□ 0.89
ARFGAP1-210ENST00000519273 ABCC3O15438 1527 aa20.59■□□□□ 0.89
ARFGAP1-210ENST00000519273 SMC4Q9NTJ3 1288 aa20.59■□□□□ 0.89
ARFGAP1-210ENST00000519273 RWDD1Q9H446 243 aaPredicted RBP20.58■□□□□ 0.89
ARFGAP1-210ENST00000519273 A0A1W2PP64 1363 aa20.58■□□□□ 0.89
ARFGAP1-210ENST00000519273 MVPQ14764 893 aaKnown RBP20.58■□□□□ 0.89
ARFGAP1-210ENST00000519273 ZKSCAN2Q63HK3 967 aa20.58■□□□□ 0.89
ARFGAP1-210ENST00000519273 DZIP1LQ8IYY4 767 aaKnown RBP20.57■□□□□ 0.88
ARFGAP1-210ENST00000519273 MLH3Q9UHC1 1453 aa20.57■□□□□ 0.88
ARFGAP1-210ENST00000519273 TMPOP42166 694 aaKnown RBP20.56■□□□□ 0.88
ARFGAP1-210ENST00000519273 PODXL2Q9NZ53 605 aa20.56■□□□□ 0.88
ARFGAP1-210ENST00000519273 SPRYD3Q8NCJ5 442 aa20.55■□□□□ 0.88
ARFGAP1-210ENST00000519273 PRAM1Q96QH2 718 aa20.55■□□□□ 0.88
ARFGAP1-210ENST00000519273 FBLN1P23142 703 aa20.55■□□□□ 0.88
ARFGAP1-210ENST00000519273 SIGLEC1Q9BZZ2 1709 aa20.55■□□□□ 0.88
ARFGAP1-210ENST00000519273 HECW2Q9P2P5 1572 aa20.55■□□□□ 0.88
ARFGAP1-210ENST00000519273 ITPRIPQ8IWB1 547 aa20.54■□□□□ 0.88
ARFGAP1-210ENST00000519273 SSH1Q8WYL5 1049 aa20.54■□□□□ 0.88
ARFGAP1-210ENST00000519273 POGKQ9P215 609 aa20.54■□□□□ 0.88
ARFGAP1-210ENST00000519273 TRIM35Q9UPQ4 493 aa20.54■□□□□ 0.88
ARFGAP1-210ENST00000519273 BECN1Q14457 450 aa20.54■□□□□ 0.88
ARFGAP1-210ENST00000519273 PLEKHF1Q96S99 279 aa20.54■□□□□ 0.88
ARFGAP1-210ENST00000519273 UPF2Q9HAU5 1272 aaKnown RBP20.54■□□□□ 0.88
ARFGAP1-210ENST00000519273 FYB1O15117 783 aa20.53■□□□□ 0.88
ARFGAP1-210ENST00000519273 TRIM27P14373 513 aa20.53■□□□□ 0.88
ARFGAP1-210ENST00000519273 ARHGEF28Q8N1W1 1705 aaKnown RBP20.52■□□□□ 0.88
ARFGAP1-210ENST00000519273 NSD2O96028 1365 aa20.52■□□□□ 0.88
ARFGAP1-210ENST00000519273 NEXMIFQ5QGS0 1516 aa20.52■□□□□ 0.88
ARFGAP1-210ENST00000519273 RIPK4P57078 832 aa20.52■□□□□ 0.87
ARFGAP1-210ENST00000519273 NLRP1Q9C000 1473 aa20.52■□□□□ 0.87
ARFGAP1-210ENST00000519273 CAMSAP1Q5T5Y3 1602 aa20.52■□□□□ 0.87
ARFGAP1-210ENST00000519273 NOB1Q9ULX3 412 aaKnown RBP20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms