RNA–Protein interactions for RNA: ENST00000519245.1

LAMA4-212, Transcript of laminin subunit alpha 4, humanhuman

TSL 3

Gene LAMA4, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-212ENST00000519245 TTC24A2A3L6 582 aaPredicted RBP11.02□□□□□ -0.65
LAMA4-212ENST00000519245 FECHP22830 423 aa11.02□□□□□ -0.65
LAMA4-212ENST00000519245 BRICD5Q6PL45 260 aa11.02□□□□□ -0.65
LAMA4-212ENST00000519245 ATP13A2Q9NQ11 1180 aa11.02□□□□□ -0.65
LAMA4-212ENST00000519245 SALL2Q9Y467 1007 aaPredicted RBP11.02□□□□□ -0.65
LAMA4-212ENST00000519245 WNT7AO00755 349 aa11.01□□□□□ -0.65
LAMA4-212ENST00000519245 NLRP7Q8WX94 980 aa11.01□□□□□ -0.65
LAMA4-212ENST00000519245 CC2D2AQ9P2K1 1620 aa11□□□□□ -0.65
LAMA4-212ENST00000519245 DDX11L8A8MPP1 907 aa11□□□□□ -0.65
LAMA4-212ENST00000519245 GCGRP47871 477 aa11□□□□□ -0.65
LAMA4-212ENST00000519245 INSM1Q01101 510 aaPredicted RBP11□□□□□ -0.65
LAMA4-212ENST00000519245 MSS51Q4VC12 460 aa11□□□□□ -0.65
LAMA4-212ENST00000519245 RNF19BQ6ZMZ0 732 aa10.99□□□□□ -0.65
LAMA4-212ENST00000519245 SNIP1Q8TAD8 396 aaKnown RBP10.99□□□□□ -0.65
LAMA4-212ENST00000519245 EIF4G1Q04637 1599 aaKnown RBP10.99□□□□□ -0.65
LAMA4-212ENST00000519245 TERTO14746 1132 aaKnown RBP10.98□□□□□ -0.65
LAMA4-212ENST00000519245 TRIM47Q96LD4 638 aa10.98□□□□□ -0.65
LAMA4-212ENST00000519245 GPR37O15354 613 aa10.97□□□□□ -0.65
LAMA4-212ENST00000519245 ZBTB24O43167 697 aaPredicted RBP10.97□□□□□ -0.65
LAMA4-212ENST00000519245 TRIM32Q13049 653 aa10.97□□□□□ -0.65
LAMA4-212ENST00000519245 J3QL48 77 aa10.96□□□□□ -0.65
LAMA4-212ENST00000519245 MRGPRX2Q96LB1 330 aa10.96□□□□□ -0.65
LAMA4-212ENST00000519245 RBM26Q5T8P6 1007 aaKnown RBP10.95□□□□□ -0.66
LAMA4-212ENST00000519245 PHOX2BQ99453 314 aa10.95□□□□□ -0.66
LAMA4-212ENST00000519245 GNPATO15228 680 aa10.94□□□□□ -0.66
LAMA4-212ENST00000519245 CECR2Q9BXF3 1484 aa10.93□□□□□ -0.66
LAMA4-212ENST00000519245 MMP16P51512 607 aa10.92□□□□□ -0.66
LAMA4-212ENST00000519245 AMER1Q5JTC6 1135 aaPredicted RBP10.92□□□□□ -0.66
LAMA4-212ENST00000519245 P3H3Q8IVL6 736 aa10.92□□□□□ -0.66
LAMA4-212ENST00000519245 HPS1Q92902 700 aa10.92□□□□□ -0.66
LAMA4-212ENST00000519245 SENP2Q9HC62 589 aa10.92□□□□□ -0.66
LAMA4-212ENST00000519245 SULF1Q8IWU6 871 aa10.91□□□□□ -0.66
LAMA4-212ENST00000519245 RTN4Q9NQC3 1192 aaKnown RBP10.91□□□□□ -0.66
LAMA4-212ENST00000519245 TESPA1A2RU30 521 aaPredicted RBP10.89□□□□□ -0.67
LAMA4-212ENST00000519245 DXOO77932 396 aaKnown RBP10.86□□□□□ -0.67
LAMA4-212ENST00000519245 KIFC2Q96AC6 838 aa10.86□□□□□ -0.67
LAMA4-212ENST00000519245 SKOR1P84550 965 aa10.85□□□□□ -0.67
LAMA4-212ENST00000519245 Q3C1V9 767 aa10.85□□□□□ -0.67
LAMA4-212ENST00000519245 REPIN1Q9BWE0 567 aaKnown RBP10.85□□□□□ -0.67
LAMA4-212ENST00000519245 GRIPAP1Q4V328 841 aa10.84□□□□□ -0.67
LAMA4-212ENST00000519245 LORP23490 312 aaPredicted RBP10.83□□□□□ -0.68
LAMA4-212ENST00000519245 RC3H1Q5TC82 1133 aaKnown RBP10.83□□□□□ -0.68
LAMA4-212ENST00000519245 USB1Q9BQ65 265 aaKnown RBP10.83□□□□□ -0.68
LAMA4-212ENST00000519245 CD46P15529 392 aa10.8□□□□□ -0.68
LAMA4-212ENST00000519245 WNT7BP56706 349 aa10.8□□□□□ -0.68
LAMA4-212ENST00000519245 HLA-CQ95604 372 aa10.79□□□□□ -0.68
LAMA4-212ENST00000519245 GMPRP36959 345 aa10.78□□□□□ -0.68
LAMA4-212ENST00000519245 NXF1Q9UBU9 619 aaKnown RBP10.78□□□□□ -0.68
LAMA4-212ENST00000519245 SMYD5Q6GMV2 418 aa10.77□□□□□ -0.69
LAMA4-212ENST00000519245 CCDC24Q8N4L8 307 aa10.77□□□□□ -0.69
LAMA4-212ENST00000519245 ALDH1A1P00352 501 aa10.76□□□□□ -0.69
LAMA4-212ENST00000519245 BMP1P13497 986 aa10.76□□□□□ -0.69
LAMA4-212ENST00000519245 TRIM46Q7Z4K8 759 aa10.76□□□□□ -0.69
LAMA4-212ENST00000519245 SLC16A10Q8TF71 515 aa10.76□□□□□ -0.69
LAMA4-212ENST00000519245 LOC100996750A0A140TA64 210 aa10.75□□□□□ -0.69
LAMA4-212ENST00000519245 KDM4AO75164 1064 aa10.75□□□□□ -0.69
LAMA4-212ENST00000519245 KRTAP4-6Q9BYQ5 205 aa10.75□□□□□ -0.69
LAMA4-212ENST00000519245 FAM181BA6NEQ2 426 aa10.73□□□□□ -0.69
LAMA4-212ENST00000519245 SIAH2O43255 324 aa10.73□□□□□ -0.69
LAMA4-212ENST00000519245 ZSCAN1Q8NBB4 408 aa10.73□□□□□ -0.69
LAMA4-212ENST00000519245 NPAS3Q8IXF0 933 aa10.72□□□□□ -0.69
LAMA4-212ENST00000519245 H3BM21 787 aa10.71□□□□□ -0.69
LAMA4-212ENST00000519245 VEGFBP49765 207 aa10.71□□□□□ -0.69
LAMA4-212ENST00000519245 IRF7Q92985 503 aa10.71□□□□□ -0.69
LAMA4-212ENST00000519245 ERBB4Q15303 1308 aa10.7□□□□□ -0.7
LAMA4-212ENST00000519245 HOXA2O43364 376 aa10.7□□□□□ -0.7
LAMA4-212ENST00000519245 SMARCA4P51532 1647 aa10.69□□□□□ -0.7
LAMA4-212ENST00000519245 ATAD2BQ9ULI0 1458 aa10.69□□□□□ -0.7
LAMA4-212ENST00000519245 JUNDP17535 347 aa10.69□□□□□ -0.7
LAMA4-212ENST00000519245 USP46P62068 366 aa10.69□□□□□ -0.7
LAMA4-212ENST00000519245 GUCA2AQ02747 115 aa10.69□□□□□ -0.7
LAMA4-212ENST00000519245 PTCRAQ6ISU1 281 aaPredicted RBP10.69□□□□□ -0.7
LAMA4-212ENST00000519245 GPIHBP1Q8IV16 184 aa10.69□□□□□ -0.7
LAMA4-212ENST00000519245 NCAPD3P42695 1498 aa10.68□□□□□ -0.7
LAMA4-212ENST00000519245 CAPN5O15484 640 aaPredicted RBP10.68□□□□□ -0.7
LAMA4-212ENST00000519245 EHBP1Q8NDI1 1231 aa10.67□□□□□ -0.7
LAMA4-212ENST00000519245 SYMPKQ92797 1274 aaKnown RBP10.66□□□□□ -0.7
LAMA4-212ENST00000519245 MROH2BQ7Z745 1585 aa10.65□□□□□ -0.71
LAMA4-212ENST00000519245 NUDT12Q9BQG2 462 aa10.64□□□□□ -0.71
LAMA4-212ENST00000519245 WASF2Q9Y6W5 498 aa10.64□□□□□ -0.71
LAMA4-212ENST00000519245 MDM2Q00987 491 aaPredicted RBP10.63□□□□□ -0.71
LAMA4-212ENST00000519245 BAZ1AQ9NRL2 1556 aaPredicted RBP10.62□□□□□ -0.71
LAMA4-212ENST00000519245 SH3BP2P78314 561 aa10.62□□□□□ -0.71
LAMA4-212ENST00000519245 MAP2K5Q13163 448 aa10.62□□□□□ -0.71
LAMA4-212ENST00000519245 ZFP42Q96MM3 310 aa10.62□□□□□ -0.71
LAMA4-212ENST00000519245 SMARCA2P51531 1590 aa10.6□□□□□ -0.71
LAMA4-212ENST00000519245 RETREG3Q86VR2 466 aa10.6□□□□□ -0.71
LAMA4-212ENST00000519245 TLL2Q9Y6L7 1015 aa10.59□□□□□ -0.71
LAMA4-212ENST00000519245 IRF6O14896 467 aa10.58□□□□□ -0.72
LAMA4-212ENST00000519245 HMGXB3Q12766 1538 aa10.58□□□□□ -0.72
LAMA4-212ENST00000519245 PEG3Q9GZU2 1588 aa10.56□□□□□ -0.72
LAMA4-212ENST00000519245 CCNYL3P0C7X3 344 aa10.55□□□□□ -0.72
LAMA4-212ENST00000519245 VSIG8P0DPA2 414 aa10.55□□□□□ -0.72
LAMA4-212ENST00000519245 PCDHGC3Q9UN70 934 aa10.55□□□□□ -0.72
LAMA4-212ENST00000519245 BAZ1BQ9UIG0 1483 aaKnown RBP10.55□□□□□ -0.72
LAMA4-212ENST00000519245 FAM217BQ9NTX9 383 aaPredicted RBP10.54□□□□□ -0.72
LAMA4-212ENST00000519245 NESP48681 1621 aa10.54□□□□□ -0.72
LAMA4-212ENST00000519245 MS4A1P11836 297 aa10.53□□□□□ -0.72
LAMA4-212ENST00000519245 LINC01559Q495D7 138 aa10.53□□□□□ -0.72
LAMA4-212ENST00000519245 MRPL14Q6P1L8 145 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms