RNA–Protein interactions for RNA: ENST00000518931.1

SQLE-203, Transcript of squalene epoxidase, humanhuman

TSL 4

Gene SQLE, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-203ENST00000518931 Q3C1V9 767 aa11.44□□□□□ -0.58
SQLE-203ENST00000518931 C6orf229H3BNL8 230 aa11.43□□□□□ -0.58
SQLE-203ENST00000518931 FMNL1O95466 1100 aaPredicted RBP11.43□□□□□ -0.58
SQLE-203ENST00000518931 ITGBL1O95965 494 aaPredicted RBP11.43□□□□□ -0.58
SQLE-203ENST00000518931 TUSC1Q2TAM9 212 aa11.43□□□□□ -0.58
SQLE-203ENST00000518931 BRICD5Q6PL45 260 aa11.43□□□□□ -0.58
SQLE-203ENST00000518931 RNF19BQ6ZMZ0 732 aa11.43□□□□□ -0.58
SQLE-203ENST00000518931 SALL2Q9Y467 1007 aaPredicted RBP11.43□□□□□ -0.58
SQLE-203ENST00000518931 THAP11Q96EK4 314 aa11.42□□□□□ -0.58
SQLE-203ENST00000518931 NUTM2BA6NNL0 878 aaPredicted RBP11.41□□□□□ -0.58
SQLE-203ENST00000518931 NUTM2EB1AL46 878 aaPredicted RBP11.41□□□□□ -0.58
SQLE-203ENST00000518931 HRCP23327 699 aa11.41□□□□□ -0.58
SQLE-203ENST00000518931 NUTM2DQ5VT03 806 aaPredicted RBP11.41□□□□□ -0.58
SQLE-203ENST00000518931 NUTM2AQ8IVF1 878 aaPredicted RBP11.41□□□□□ -0.58
SQLE-203ENST00000518931 NKX2-3Q8TAU0 364 aa11.41□□□□□ -0.58
SQLE-203ENST00000518931 SPSB2Q99619 263 aa11.41□□□□□ -0.58
SQLE-203ENST00000518931 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.41□□□□□ -0.58
SQLE-203ENST00000518931 TLL1O43897 1013 aa11.4□□□□□ -0.58
SQLE-203ENST00000518931 LILRB3O75022 631 aa11.4□□□□□ -0.58
SQLE-203ENST00000518931 MTMR2Q13614 643 aa11.4□□□□□ -0.58
SQLE-203ENST00000518931 QPCTQ16769 361 aa11.4□□□□□ -0.58
SQLE-203ENST00000518931 PRPF38BQ5VTL8 546 aaKnown RBP11.4□□□□□ -0.58
SQLE-203ENST00000518931 CABLES1Q8TDN4 633 aa11.4□□□□□ -0.58
SQLE-203ENST00000518931 ZBTB3Q9H5J0 574 aa11.4□□□□□ -0.58
SQLE-203ENST00000518931 USB1Q9BQ65 265 aaKnown RBP11.38□□□□□ -0.59
SQLE-203ENST00000518931 ADH1BP00325 375 aa11.37□□□□□ -0.59
SQLE-203ENST00000518931 RTL5Q5HYW3 569 aaPredicted RBP11.37□□□□□ -0.59
SQLE-203ENST00000518931 PLA2G2EQ9NZK7 142 aa11.37□□□□□ -0.59
SQLE-203ENST00000518931 SPDYE5A6NIY4 337 aa11.36□□□□□ -0.59
SQLE-203ENST00000518931 FBXO31Q5XUX0 539 aaPredicted RBP11.36□□□□□ -0.59
SQLE-203ENST00000518931 RETREG3Q86VR2 466 aa11.36□□□□□ -0.59
SQLE-203ENST00000518931 FAM160A2Q8N612 972 aaPredicted RBP11.36□□□□□ -0.59
SQLE-203ENST00000518931 PPP2R2DQ66LE6 453 aa11.34□□□□□ -0.59
SQLE-203ENST00000518931 PRR7Q8TB68 274 aa11.34□□□□□ -0.59
SQLE-203ENST00000518931 SLC6A16Q9GZN6 736 aa11.33□□□□□ -0.6
SQLE-203ENST00000518931 CFAP99D6REC4 459 aa11.31□□□□□ -0.6
SQLE-203ENST00000518931 MSS51Q4VC12 460 aa11.31□□□□□ -0.6
SQLE-203ENST00000518931 TSC1Q92574 1164 aa11.31□□□□□ -0.6
SQLE-203ENST00000518931 RFC5P40937 340 aa11.3□□□□□ -0.6
SQLE-203ENST00000518931 IFFO2Q5TF58 517 aa11.3□□□□□ -0.6
SQLE-203ENST00000518931 PRDM9Q9NQV7 894 aa11.3□□□□□ -0.6
SQLE-203ENST00000518931 S1PR4O95977 384 aa11.29□□□□□ -0.6
SQLE-203ENST00000518931 PPP1R18Q6NYC8 613 aa11.28□□□□□ -0.6
SQLE-203ENST00000518931 AP1G2O75843 785 aa11.26□□□□□ -0.61
SQLE-203ENST00000518931 JUNDP17535 347 aa11.26□□□□□ -0.61
SQLE-203ENST00000518931 DESI1Q6ICB0 168 aa11.26□□□□□ -0.61
SQLE-203ENST00000518931 PPEF1O14829 653 aaPredicted RBP11.25□□□□□ -0.61
SQLE-203ENST00000518931 GGCXP38435 758 aa11.25□□□□□ -0.61
SQLE-203ENST00000518931 MMP16P51512 607 aa11.25□□□□□ -0.61
SQLE-203ENST00000518931 CTDSPL2Q05D32 466 aa11.25□□□□□ -0.61
SQLE-203ENST00000518931 TMEM259Q4ZIN3 620 aa11.25□□□□□ -0.61
SQLE-203ENST00000518931 HELBQ8NG08 1087 aaPredicted RBP11.25□□□□□ -0.61
SQLE-203ENST00000518931 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.25□□□□□ -0.61
SQLE-203ENST00000518931 DXOO77932 396 aaKnown RBP11.24□□□□□ -0.61
SQLE-203ENST00000518931 RNF223E7ERA6 249 aa11.23□□□□□ -0.61
SQLE-203ENST00000518931 PER1O15534 1290 aaPredicted RBP11.22□□□□□ -0.61
SQLE-203ENST00000518931 LYPD8Q6UX82 237 aa11.22□□□□□ -0.61
SQLE-203ENST00000518931 A0A0G2JS52 829 aa11.2□□□□□ -0.62
SQLE-203ENST00000518931 CCDC24Q8N4L8 307 aa11.2□□□□□ -0.62
SQLE-203ENST00000518931 FCF1Q9Y324 198 aaKnown RBP11.2□□□□□ -0.62
SQLE-203ENST00000518931 PTPRNQ16849 979 aa11.19□□□□□ -0.62
SQLE-203ENST00000518931 NUDT12Q9BQG2 462 aa11.19□□□□□ -0.62
SQLE-203ENST00000518931 ANKLE1Q8NAG6 615 aa11.18□□□□□ -0.62
SQLE-203ENST00000518931 BANK1Q8NDB2 785 aa11.18□□□□□ -0.62
SQLE-203ENST00000518931 LRRN4Q8WUT4 740 aa11.18□□□□□ -0.62
SQLE-203ENST00000518931 USP17L8P0C7I0 530 aa11.17□□□□□ -0.62
SQLE-203ENST00000518931 EVA1BQ9NVM1 165 aa11.17□□□□□ -0.62
SQLE-203ENST00000518931 GTF3C3Q9Y5Q9 886 aa11.17□□□□□ -0.62
SQLE-203ENST00000518931 CCNYL3P0C7X3 344 aa11.16□□□□□ -0.62
SQLE-203ENST00000518931 CTHP32929 405 aa11.15□□□□□ -0.62
SQLE-203ENST00000518931 SNRKQ9NRH2 765 aa11.15□□□□□ -0.62
SQLE-203ENST00000518931 KCNH2Q12809 1159 aa11.13□□□□□ -0.63
SQLE-203ENST00000518931 PLA2G2CQ5R387 149 aa11.13□□□□□ -0.63
SQLE-203ENST00000518931 PTCRAQ6ISU1 281 aaPredicted RBP11.13□□□□□ -0.63
SQLE-203ENST00000518931 HMX1Q9NP08 348 aaPredicted RBP11.12□□□□□ -0.63
SQLE-203ENST00000518931 MAP10Q9P2G4 905 aa11.12□□□□□ -0.63
SQLE-203ENST00000518931 ZBTB24O43167 697 aaPredicted RBP11.11□□□□□ -0.63
SQLE-203ENST00000518931 F12P00748 615 aaPredicted RBP11.11□□□□□ -0.63
SQLE-203ENST00000518931 NR6A1Q15406 480 aa11.11□□□□□ -0.63
SQLE-203ENST00000518931 EPS8L1Q8TE68 723 aa11.09□□□□□ -0.63
SQLE-203ENST00000518931 FLIIQ13045 1269 aa11.08□□□□□ -0.64
SQLE-203ENST00000518931 LIAT1Q6ZQX7 453 aa11.08□□□□□ -0.64
SQLE-203ENST00000518931 MTMR14Q8NCE2 650 aa11.08□□□□□ -0.64
SQLE-203ENST00000518931 UNC93B1Q9H1C4 597 aa11.08□□□□□ -0.64
SQLE-203ENST00000518931 SLC19A1P41440 591 aa11.07□□□□□ -0.64
SQLE-203ENST00000518931 EMID1Q96A84 441 aaPredicted RBP11.07□□□□□ -0.64
SQLE-203ENST00000518931 MCM6Q14566 821 aa11.06□□□□□ -0.64
SQLE-203ENST00000518931 GJD4Q96KN9 370 aaPredicted RBP11.06□□□□□ -0.64
SQLE-203ENST00000518931 TRIM34Q9BYJ4 488 aa11.06□□□□□ -0.64
SQLE-203ENST00000518931 CD2BP2O95400 341 aaKnown RBP11.05□□□□□ -0.64
SQLE-203ENST00000518931 RPIAP49247 311 aa11.05□□□□□ -0.64
SQLE-203ENST00000518931 PRKD2Q9BZL6 878 aa11.05□□□□□ -0.64
SQLE-203ENST00000518931 APBB1O00213 710 aa11.03□□□□□ -0.64
SQLE-203ENST00000518931 BAP1Q92560 729 aa11.03□□□□□ -0.64
SQLE-203ENST00000518931 SOCS7O14512 581 aa11.02□□□□□ -0.65
SQLE-203ENST00000518931 TRIM32Q13049 653 aa11.02□□□□□ -0.65
SQLE-203ENST00000518931 ARMC2Q8NEN0 867 aa11.02□□□□□ -0.65
SQLE-203ENST00000518931 V9GY48 417 aaPredicted RBP11.01□□□□□ -0.65
SQLE-203ENST00000518931 LINC01559Q495D7 138 aa11□□□□□ -0.65
SQLE-203ENST00000518931 SPRYD7Q5W111 196 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms