RNA–Protein interactions for RNA: ENST00000518877.1

PCM1-208, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-208ENST00000518877 C11orf95C9JLR9 678 aaPredicted RBP8.08□□□□□ -1.12
PCM1-208ENST00000518877 PLCB2Q00722 1185 aa8.07□□□□□ -1.12
PCM1-208ENST00000518877 Q3C1V9 767 aa8.07□□□□□ -1.12
PCM1-208ENST00000518877 WNT7AO00755 349 aa8.04□□□□□ -1.12
PCM1-208ENST00000518877 WFS1O76024 890 aa8.04□□□□□ -1.12
PCM1-208ENST00000518877 CD46P15529 392 aa8.04□□□□□ -1.12
PCM1-208ENST00000518877 SMCPP49901 116 aaPredicted RBP8.04□□□□□ -1.12
PCM1-208ENST00000518877 TRIM32Q13049 653 aa8.04□□□□□ -1.12
PCM1-208ENST00000518877 KDM4AO75164 1064 aa8.03□□□□□ -1.12
PCM1-208ENST00000518877 CCDC24Q8N4L8 307 aa8.03□□□□□ -1.12
PCM1-208ENST00000518877 SNIP1Q8TAD8 396 aaKnown RBP8.03□□□□□ -1.12
PCM1-208ENST00000518877 USB1Q9BQ65 265 aaKnown RBP8.03□□□□□ -1.12
PCM1-208ENST00000518877 MMP16P51512 607 aa8.02□□□□□ -1.13
PCM1-208ENST00000518877 MRGPRX2Q96LB1 330 aa8.02□□□□□ -1.13
PCM1-208ENST00000518877 SMPD1P17405 629 aa8.01□□□□□ -1.13
PCM1-208ENST00000518877 HAP1P54257 671 aaPredicted RBP8.01□□□□□ -1.13
PCM1-208ENST00000518877 MAP2K5Q13163 448 aa8.01□□□□□ -1.13
PCM1-208ENST00000518877 LCE2AQ5TA79 106 aaPredicted RBP8.01□□□□□ -1.13
PCM1-208ENST00000518877 J3QL48 77 aa8□□□□□ -1.13
PCM1-208ENST00000518877 TULP1O00294 542 aaPredicted RBP8□□□□□ -1.13
PCM1-208ENST00000518877 MDM2Q00987 491 aaPredicted RBP8□□□□□ -1.13
PCM1-208ENST00000518877 REPIN1Q9BWE0 567 aaKnown RBP8□□□□□ -1.13
PCM1-208ENST00000518877 ATP13A2Q9NQ11 1180 aa8□□□□□ -1.13
PCM1-208ENST00000518877 DXOO77932 396 aaKnown RBP7.99□□□□□ -1.13
PCM1-208ENST00000518877 HLA-CQ95604 372 aa7.99□□□□□ -1.13
PCM1-208ENST00000518877 USP46P62068 366 aa7.98□□□□□ -1.13
PCM1-208ENST00000518877 SENP2Q9HC62 589 aa7.97□□□□□ -1.13
PCM1-208ENST00000518877 IRF6O14896 467 aa7.96□□□□□ -1.14
PCM1-208ENST00000518877 HOXA2O43364 376 aa7.96□□□□□ -1.14
PCM1-208ENST00000518877 NFX1Q12986 1120 aaKnown RBP7.96□□□□□ -1.14
PCM1-208ENST00000518877 RC3H1Q5TC82 1133 aaKnown RBP7.96□□□□□ -1.14
PCM1-208ENST00000518877 HPS1Q92902 700 aa7.96□□□□□ -1.14
PCM1-208ENST00000518877 SNRPBP14678 240 aaKnown RBP7.95□□□□□ -1.14
PCM1-208ENST00000518877 GUCA2AQ02747 115 aa7.95□□□□□ -1.14
PCM1-208ENST00000518877 WNT7BP56706 349 aa7.94□□□□□ -1.14
PCM1-208ENST00000518877 SKOR1P84550 965 aa7.94□□□□□ -1.14
PCM1-208ENST00000518877 KRI1Q8N9T8 703 aaKnown RBP7.94□□□□□ -1.14
PCM1-208ENST00000518877 TRIM47Q96LD4 638 aa7.94□□□□□ -1.14
PCM1-208ENST00000518877 MINK1Q8N4C8 1332 aaPredicted RBP7.94□□□□□ -1.14
PCM1-208ENST00000518877 ALDH1A1P00352 501 aa7.93□□□□□ -1.14
PCM1-208ENST00000518877 JUNDP17535 347 aa7.93□□□□□ -1.14
PCM1-208ENST00000518877 INSM1Q01101 510 aaPredicted RBP7.93□□□□□ -1.14
PCM1-208ENST00000518877 NUTM1Q86Y26 1132 aa7.93□□□□□ -1.14
PCM1-208ENST00000518877 CCDC102AQ96A19 550 aa7.93□□□□□ -1.14
PCM1-208ENST00000518877 KIFC2Q96AC6 838 aa7.93□□□□□ -1.14
PCM1-208ENST00000518877 TERTO14746 1132 aaKnown RBP7.92□□□□□ -1.14
PCM1-208ENST00000518877 SYMPKQ92797 1274 aaKnown RBP7.92□□□□□ -1.14
PCM1-208ENST00000518877 GPCPD1Q9NPB8 672 aa7.92□□□□□ -1.14
PCM1-208ENST00000518877 CLCN1P35523 988 aa7.91□□□□□ -1.14
PCM1-208ENST00000518877 NUDT12Q9BQG2 462 aa7.91□□□□□ -1.14
PCM1-208ENST00000518877 STK17AQ9UEE5 414 aa7.91□□□□□ -1.14
PCM1-208ENST00000518877 WIPF1O43516 503 aa7.9□□□□□ -1.14
PCM1-208ENST00000518877 EHBP1Q8NDI1 1231 aa7.9□□□□□ -1.14
PCM1-208ENST00000518877 KDM2AQ9Y2K7 1162 aa7.9□□□□□ -1.14
PCM1-208ENST00000518877 RETREG3Q86VR2 466 aa7.89□□□□□ -1.15
PCM1-208ENST00000518877 FAM217BQ9NTX9 383 aaPredicted RBP7.89□□□□□ -1.15
PCM1-208ENST00000518877 WASF2Q9Y6W5 498 aa7.89□□□□□ -1.15
PCM1-208ENST00000518877 C6orf229H3BNL8 230 aa7.88□□□□□ -1.15
PCM1-208ENST00000518877 FDX1P10109 184 aa7.87□□□□□ -1.15
PCM1-208ENST00000518877 PTCRAQ6ISU1 281 aaPredicted RBP7.87□□□□□ -1.15
PCM1-208ENST00000518877 SLC16A10Q8TF71 515 aa7.86□□□□□ -1.15
PCM1-208ENST00000518877 CAPN5O15484 640 aaPredicted RBP7.85□□□□□ -1.15
PCM1-208ENST00000518877 CCNYL3P0C7X3 344 aa7.85□□□□□ -1.15
PCM1-208ENST00000518877 MS4A1P11836 297 aa7.85□□□□□ -1.15
PCM1-208ENST00000518877 BMP1P13497 986 aa7.85□□□□□ -1.15
PCM1-208ENST00000518877 SIAH2O43255 324 aa7.84□□□□□ -1.15
PCM1-208ENST00000518877 LCE2CQ5TA81 110 aa7.84□□□□□ -1.15
PCM1-208ENST00000518877 SH3BP2P78314 561 aa7.83□□□□□ -1.16
PCM1-208ENST00000518877 PCDHGC3Q9UN70 934 aa7.83□□□□□ -1.16
PCM1-208ENST00000518877 LINC01559Q495D7 138 aa7.82□□□□□ -1.16
PCM1-208ENST00000518877 UNC93B1Q9H1C4 597 aa7.82□□□□□ -1.16
PCM1-208ENST00000518877 NXF1Q9UBU9 619 aaKnown RBP7.82□□□□□ -1.16
PCM1-208ENST00000518877 SSTR3P32745 418 aaPredicted RBP7.81□□□□□ -1.16
PCM1-208ENST00000518877 TRIM46Q7Z4K8 759 aa7.81□□□□□ -1.16
PCM1-208ENST00000518877 NDUFV2P19404 249 aa7.8□□□□□ -1.16
PCM1-208ENST00000518877 TTLL12Q14166 644 aaPredicted RBP7.8□□□□□ -1.16
PCM1-208ENST00000518877 PTPRNQ16849 979 aa7.8□□□□□ -1.16
PCM1-208ENST00000518877 SPIRE2Q8WWL2 714 aa7.8□□□□□ -1.16
PCM1-208ENST00000518877 BAP1Q92560 729 aa7.8□□□□□ -1.16
PCM1-208ENST00000518877 TLL2Q9Y6L7 1015 aa7.8□□□□□ -1.16
PCM1-208ENST00000518877 FAM181BA6NEQ2 426 aa7.79□□□□□ -1.16
PCM1-208ENST00000518877 VEGFBP49765 207 aa7.79□□□□□ -1.16
PCM1-208ENST00000518877 PRR7Q8TB68 274 aa7.79□□□□□ -1.16
PCM1-208ENST00000518877 PLEKHG3A1L390 1219 aa7.78□□□□□ -1.16
PCM1-208ENST00000518877 MOXD2PA6NHM9 499 aa7.78□□□□□ -1.16
PCM1-208ENST00000518877 KCNH2Q12809 1159 aa7.78□□□□□ -1.16
PCM1-208ENST00000518877 VSIG10Q8N0Z9 540 aa7.78□□□□□ -1.16
PCM1-208ENST00000518877 IRF7Q92985 503 aa7.78□□□□□ -1.16
PCM1-208ENST00000518877 EVA1BQ9NVM1 165 aa7.78□□□□□ -1.16
PCM1-208ENST00000518877 GMPRP36959 345 aa7.77□□□□□ -1.17
PCM1-208ENST00000518877 MTMR2Q13614 643 aa7.77□□□□□ -1.17
PCM1-208ENST00000518877 ZNF511Q8NB15 262 aa7.77□□□□□ -1.17
PCM1-208ENST00000518877 ZFP42Q96MM3 310 aa7.77□□□□□ -1.17
PCM1-208ENST00000518877 VARSP26640 1264 aaKnown RBP7.76□□□□□ -1.17
PCM1-208ENST00000518877 CTHP32929 405 aa7.76□□□□□ -1.17
PCM1-208ENST00000518877 NNTQ13423 1086 aa7.76□□□□□ -1.17
PCM1-208ENST00000518877 NPAS3Q8IXF0 933 aa7.76□□□□□ -1.17
PCM1-208ENST00000518877 SPDYE5A6NIY4 337 aa7.75□□□□□ -1.17
PCM1-208ENST00000518877 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.75□□□□□ -1.17
PCM1-208ENST00000518877 SCARF1Q14162 830 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms