RNA–Protein interactions for RNA: ENST00000518780.1

CLN8-203, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-203ENST00000518780 C14orf37Q86TY3 774 aa13.26□□□□□ -0.29
CLN8-203ENST00000518780 EVC2Q86UK5 1308 aa13.26□□□□□ -0.29
CLN8-203ENST00000518780 LRRC7Q96NW7 1537 aa13.26□□□□□ -0.29
CLN8-203ENST00000518780 DCCP43146 1447 aa13.25□□□□□ -0.29
CLN8-203ENST00000518780 ADGRL3Q9HAR2 1447 aa13.25□□□□□ -0.29
CLN8-203ENST00000518780 PLEKHH1Q9ULM0 1364 aa13.25□□□□□ -0.29
CLN8-203ENST00000518780 LTBP4Q8N2S1 1624 aa13.24□□□□□ -0.29
CLN8-203ENST00000518780 MSH6P52701 1360 aa13.24□□□□□ -0.29
CLN8-203ENST00000518780 WASLO00401 505 aaPredicted RBP13.24□□□□□ -0.29
CLN8-203ENST00000518780 SAFB2Q14151 953 aaKnown RBP eCLIP13.24□□□□□ -0.29
CLN8-203ENST00000518780 CADPS2Q86UW7 1296 aa13.24□□□□□ -0.29
CLN8-203ENST00000518780 MINK1Q8N4C8 1332 aaPredicted RBP13.23□□□□□ -0.29
CLN8-203ENST00000518780 ADRA2BP18089 450 aa13.23□□□□□ -0.29
CLN8-203ENST00000518780 IQSEC2Q5JU85 1478 aa13.23□□□□□ -0.29
CLN8-203ENST00000518780 ARHGEF28Q8N1W1 1705 aaKnown RBP13.22□□□□□ -0.29
CLN8-203ENST00000518780 ATF3P18847 181 aa13.22□□□□□ -0.29
CLN8-203ENST00000518780 CDK19Q9BWU1 502 aa13.21□□□□□ -0.29
CLN8-203ENST00000518780 ADGRB2O60241 1585 aa13.2□□□□□ -0.3
CLN8-203ENST00000518780 SRPK2P78362 688 aaKnown RBP13.19□□□□□ -0.3
CLN8-203ENST00000518780 CERKQ8TCT0 537 aa13.19□□□□□ -0.3
CLN8-203ENST00000518780 RBM33Q96EV2 1170 aaKnown RBP13.19□□□□□ -0.3
CLN8-203ENST00000518780 HIRIP3Q9BW71 556 aaPredicted RBP13.19□□□□□ -0.3
CLN8-203ENST00000518780 ANKARQ7Z5J8 1434 aa13.19□□□□□ -0.3
CLN8-203ENST00000518780 STRCP1A6NGW2 1772 aa13.19□□□□□ -0.3
CLN8-203ENST00000518780 ATAD2Q6PL18 1390 aa13.19□□□□□ -0.3
CLN8-203ENST00000518780 CCDC61Q9Y6R9 512 aa13.18□□□□□ -0.3
CLN8-203ENST00000518780 CDC42BPGQ6DT37 1551 aa13.18□□□□□ -0.3
CLN8-203ENST00000518780 TOM1O60784 492 aa13.17□□□□□ -0.3
CLN8-203ENST00000518780 NINLQ9Y2I6 1382 aa13.17□□□□□ -0.3
CLN8-203ENST00000518780 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.16□□□□□ -0.3
CLN8-203ENST00000518780 ZNF316A6NFI3 1004 aaPredicted RBP13.16□□□□□ -0.3
CLN8-203ENST00000518780 NUDT16Q96DE0 195 aaKnown RBP13.16□□□□□ -0.3
CLN8-203ENST00000518780 SLAIN2Q9P270 581 aa13.16□□□□□ -0.3
CLN8-203ENST00000518780 QRICH2Q9H0J4 1663 aa13.15□□□□□ -0.3
CLN8-203ENST00000518780 CABP2Q9NPB3 220 aa13.15□□□□□ -0.3
CLN8-203ENST00000518780 DISP3Q9P2K9 1392 aa13.15□□□□□ -0.3
CLN8-203ENST00000518780 TULP4Q9NRJ4 1543 aa13.14□□□□□ -0.31
CLN8-203ENST00000518780 PLEKHG3A1L390 1219 aa13.14□□□□□ -0.31
CLN8-203ENST00000518780 MST1RQ04912 1400 aa13.13□□□□□ -0.31
CLN8-203ENST00000518780 KIF7Q2M1P5 1343 aa13.13□□□□□ -0.31
CLN8-203ENST00000518780 C1orf167Q5SNV9 1468 aa13.12□□□□□ -0.31
CLN8-203ENST00000518780 CCDC7Q96M83 1385 aa13.12□□□□□ -0.31
CLN8-203ENST00000518780 C11orf95C9JLR9 678 aaPredicted RBP13.12□□□□□ -0.31
CLN8-203ENST00000518780 ZNF692Q9BU19 519 aaPredicted RBP13.12□□□□□ -0.31
CLN8-203ENST00000518780 WASHC2AQ641Q2 1341 aa13.12□□□□□ -0.31
CLN8-203ENST00000518780 PRR36Q9H6K5 1346 aa13.12□□□□□ -0.31
CLN8-203ENST00000518780 NALCNQ8IZF0 1738 aa13.11□□□□□ -0.31
CLN8-203ENST00000518780 ESCO1Q5FWF5 840 aa13.11□□□□□ -0.31
CLN8-203ENST00000518780 TERF2IPQ9NYB0 399 aa13.11□□□□□ -0.31
CLN8-203ENST00000518780 PHF8Q9UPP1 1060 aa13.11□□□□□ -0.31
CLN8-203ENST00000518780 ATP7BP35670 1465 aa13.1□□□□□ -0.31
CLN8-203ENST00000518780 CABP1Q9NZU7 370 aa13.1□□□□□ -0.31
CLN8-203ENST00000518780 BRD4O60885 1362 aaPredicted RBP13.09□□□□□ -0.31
CLN8-203ENST00000518780 NUTM2FA1L443 756 aa13.09□□□□□ -0.31
CLN8-203ENST00000518780 UBAP1LF5GYI3 381 aa13.09□□□□□ -0.31
CLN8-203ENST00000518780 PPIP5K1Q6PFW1 1433 aa13.09□□□□□ -0.31
CLN8-203ENST00000518780 HDGFL2Q7Z4V5 671 aaPredicted RBP13.09□□□□□ -0.31
CLN8-203ENST00000518780 PIAS4Q8N2W9 510 aaPredicted RBP13.09□□□□□ -0.31
CLN8-203ENST00000518780 TMC1Q8TDI8 760 aa13.09□□□□□ -0.31
CLN8-203ENST00000518780 XIRP1Q702N8 1843 aaKnown RBP13.09□□□□□ -0.31
CLN8-203ENST00000518780 FMN2Q9NZ56 1722 aa13.08□□□□□ -0.32
CLN8-203ENST00000518780 NGDNQ8NEJ9 315 aaKnown RBP13.08□□□□□ -0.32
CLN8-203ENST00000518780 ORAI2Q96SN7 254 aa13.08□□□□□ -0.32
CLN8-203ENST00000518780 SLC12A5Q9H2X9 1139 aa13.08□□□□□ -0.32
CLN8-203ENST00000518780 POLR3AO14802 1390 aaPredicted RBP13.07□□□□□ -0.32
CLN8-203ENST00000518780 BRINP3Q76B58 766 aa13.07□□□□□ -0.32
CLN8-203ENST00000518780 POLR3GLQ9BT43 218 aa13.07□□□□□ -0.32
CLN8-203ENST00000518780 NPHP3Q7Z494 1330 aa13.07□□□□□ -0.32
CLN8-203ENST00000518780 ANKRD36BQ8N2N9 1353 aa13.07□□□□□ -0.32
CLN8-203ENST00000518780 PSME1Q06323 249 aa13.06□□□□□ -0.32
CLN8-203ENST00000518780 ACEP12821 1306 aa13.06□□□□□ -0.32
CLN8-203ENST00000518780 CPSF1Q10570 1443 aaKnown RBP13.05□□□□□ -0.32
CLN8-203ENST00000518780 PMFBP1Q8TBY8 1022 aa13.05□□□□□ -0.32
CLN8-203ENST00000518780 FOXO3O43524 673 aa13.04□□□□□ -0.32
CLN8-203ENST00000518780 USP32Q8NFA0 1604 aa13.03□□□□□ -0.32
CLN8-203ENST00000518780 PANK3Q9H999 370 aa13.03□□□□□ -0.32
CLN8-203ENST00000518780 KRT28Q7Z3Y7 464 aa13.02□□□□□ -0.33
CLN8-203ENST00000518780 KTN1Q86UP2 1357 aaKnown RBP13.02□□□□□ -0.33
CLN8-203ENST00000518780 KIF1AQ12756 1690 aa13.02□□□□□ -0.33
CLN8-203ENST00000518780 PIP4K2BP78356 416 aa13.01□□□□□ -0.33
CLN8-203ENST00000518780 KNSTRNQ9Y448 316 aa13.01□□□□□ -0.33
CLN8-203ENST00000518780 SOS2Q07890 1332 aaPredicted RBP13.01□□□□□ -0.33
CLN8-203ENST00000518780 TTC21AQ8NDW8 1320 aa13.01□□□□□ -0.33
CLN8-203ENST00000518780 A0A1W2PP64 1363 aa13.01□□□□□ -0.33
CLN8-203ENST00000518780 SBNO1A3KN83 1393 aa13.01□□□□□ -0.33
CLN8-203ENST00000518780 USP6P35125 1406 aa13.01□□□□□ -0.33
CLN8-203ENST00000518780 TOPAZ1Q8N9V7 1692 aa13.01□□□□□ -0.33
CLN8-203ENST00000518780 ITSN1Q15811 1721 aa13.01□□□□□ -0.33
CLN8-203ENST00000518780 CD163L1Q9NR16 1453 aa13□□□□□ -0.33
CLN8-203ENST00000518780 EDC4Q6P2E9 1401 aaKnown RBP13□□□□□ -0.33
CLN8-203ENST00000518780 PER1O15534 1290 aaPredicted RBP13□□□□□ -0.33
CLN8-203ENST00000518780 LRRC59Q96AG4 307 aaKnown RBP13□□□□□ -0.33
CLN8-203ENST00000518780 SSH2Q76I76 1423 aa12.99□□□□□ -0.33
CLN8-203ENST00000518780 DDX10Q13206 875 aaKnown RBP12.99□□□□□ -0.33
CLN8-203ENST00000518780 CARD14Q9BXL6 1004 aa12.99□□□□□ -0.33
CLN8-203ENST00000518780 NPC1L1Q9UHC9 1359 aa12.98□□□□□ -0.33
CLN8-203ENST00000518780 CGNL1Q0VF96 1302 aa12.98□□□□□ -0.33
CLN8-203ENST00000518780 TTC21BQ7Z4L5 1316 aa12.98□□□□□ -0.33
CLN8-203ENST00000518780 SCAF1Q9H7N4 1312 aaKnown RBP12.98□□□□□ -0.33
CLN8-203ENST00000518780 FBXO41Q8TF61 875 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms