RNA–Protein interactions for RNA: ENST00000518692.1

SPIDR-207, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 726 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-207ENST00000518692 PNPLA6Q8IY17 1366 aa25.9■■□□□ 1.74
SPIDR-207ENST00000518692 KNDC1Q76NI1 1749 aa25.89■■□□□ 1.74
SPIDR-207ENST00000518692 PLEKHH1Q9ULM0 1364 aa25.89■■□□□ 1.74
SPIDR-207ENST00000518692 CDC42BPGQ6DT37 1551 aa25.89■■□□□ 1.73
SPIDR-207ENST00000518692 ABCC11Q96J66 1382 aa25.88■■□□□ 1.73
SPIDR-207ENST00000518692 NRXN1Q9ULB1 1477 aa25.87■■□□□ 1.73
SPIDR-207ENST00000518692 YTHDC2Q9H6S0 1430 aaKnown RBP25.86■■□□□ 1.73
SPIDR-207ENST00000518692 SOS2Q07890 1332 aaPredicted RBP25.86■■□□□ 1.73
SPIDR-207ENST00000518692 C14orf93Q9H972 538 aaKnown RBP25.85■■□□□ 1.73
SPIDR-207ENST00000518692 MYOM2P54296 1465 aa25.85■■□□□ 1.73
SPIDR-207ENST00000518692 ZNF772Q68DY9 489 aaPredicted RBP25.84■■□□□ 1.73
SPIDR-207ENST00000518692 CFAP70Q5T0N1 1121 aa25.83■■□□□ 1.73
SPIDR-207ENST00000518692 NUTM2FA1L443 756 aa25.8■■□□□ 1.72
SPIDR-207ENST00000518692 ESCO1Q5FWF5 840 aa25.8■■□□□ 1.72
SPIDR-207ENST00000518692 AFF2P51816 1311 aa25.8■■□□□ 1.72
SPIDR-207ENST00000518692 FMN2Q9NZ56 1722 aa25.77■■□□□ 1.72
SPIDR-207ENST00000518692 SIRT1Q96EB6 747 aa25.76■■□□□ 1.71
SPIDR-207ENST00000518692 C8orf37Q96NL8 207 aa25.76■■□□□ 1.71
SPIDR-207ENST00000518692 PXDNQ92626 1479 aa25.75■■□□□ 1.71
SPIDR-207ENST00000518692 HRCP23327 699 aa25.75■■□□□ 1.71
SPIDR-207ENST00000518692 DHX57Q6P158 1386 aaKnown RBP25.74■■□□□ 1.71
SPIDR-207ENST00000518692 FOXO3O43524 673 aa25.74■■□□□ 1.71
SPIDR-207ENST00000518692 ADAMTS2O95450 1211 aa25.74■■□□□ 1.71
SPIDR-207ENST00000518692 NPHP3Q7Z494 1330 aa25.73■■□□□ 1.71
SPIDR-207ENST00000518692 XPCQ01831 940 aaPredicted RBP25.73■■□□□ 1.71
SPIDR-207ENST00000518692 COL22A1Q8NFW1 1626 aaPredicted RBP25.72■■□□□ 1.71
SPIDR-207ENST00000518692 ADGRB1O14514 1584 aa25.71■■□□□ 1.71
SPIDR-207ENST00000518692 RXRBP28702 533 aa25.71■■□□□ 1.71
SPIDR-207ENST00000518692 RGPD8O14715 1765 aaPredicted RBP25.7■■□□□ 1.7
SPIDR-207ENST00000518692 PRAM1Q96QH2 718 aa25.69■■□□□ 1.7
SPIDR-207ENST00000518692 KDM2AQ9Y2K7 1162 aa25.69■■□□□ 1.7
SPIDR-207ENST00000518692 SAFB2Q14151 953 aaKnown RBP eCLIP25.68■■□□□ 1.7
SPIDR-207ENST00000518692 DCAF11Q8TEB1 546 aa25.68■■□□□ 1.7
SPIDR-207ENST00000518692 DLC1Q96QB1 1528 aa25.68■■□□□ 1.7
SPIDR-207ENST00000518692 NGLY1Q96IV0 654 aa25.67■■□□□ 1.7
SPIDR-207ENST00000518692 QTRT2Q9H974 415 aaKnown RBP25.66■■□□□ 1.7
SPIDR-207ENST00000518692 KIF1AQ12756 1690 aa25.65■■□□□ 1.7
SPIDR-207ENST00000518692 CDK12Q9NYV4 1490 aaPredicted RBP25.65■■□□□ 1.7
SPIDR-207ENST00000518692 TRAK1Q9UPV9 953 aa25.63■■□□□ 1.69
SPIDR-207ENST00000518692 POGKQ9P215 609 aa25.61■■□□□ 1.69
SPIDR-207ENST00000518692 USP32Q8NFA0 1604 aa25.6■■□□□ 1.69
SPIDR-207ENST00000518692 RBM6P78332 1123 aaKnown RBP25.6■■□□□ 1.69
SPIDR-207ENST00000518692 FNBP4Q8N3X1 1017 aaPredicted RBP25.6■■□□□ 1.69
SPIDR-207ENST00000518692 RGS12O14924 1447 aa25.6■■□□□ 1.69
SPIDR-207ENST00000518692 SPATA31A3Q5VYP0 1347 aa25.6■■□□□ 1.69
SPIDR-207ENST00000518692 KRT28Q7Z3Y7 464 aa25.59■■□□□ 1.69
SPIDR-207ENST00000518692 UPF1Q92900 1129 aaKnown RBP eCLIP25.59■■□□□ 1.69
SPIDR-207ENST00000518692 USP21Q9UK80 565 aa25.59■■□□□ 1.69
SPIDR-207ENST00000518692 PHF8Q9UPP1 1060 aa25.59■■□□□ 1.69
SPIDR-207ENST00000518692 ADGRB2O60241 1585 aa25.59■■□□□ 1.69
SPIDR-207ENST00000518692 MARF1Q9Y4F3 1742 aaKnown RBP25.59■■□□□ 1.69
SPIDR-207ENST00000518692 STAC3Q96MF2 364 aa25.56■■□□□ 1.68
SPIDR-207ENST00000518692 HIRIP3Q9BW71 556 aaPredicted RBP25.56■■□□□ 1.68
SPIDR-207ENST00000518692 MINK1Q8N4C8 1332 aaPredicted RBP25.54■■□□□ 1.68
SPIDR-207ENST00000518692 ATRNO75882 1429 aa25.53■■□□□ 1.68
SPIDR-207ENST00000518692 ANKARQ7Z5J8 1434 aa25.53■■□□□ 1.68
SPIDR-207ENST00000518692 BCL9LQ86UU0 1499 aa25.53■■□□□ 1.68
SPIDR-207ENST00000518692 PMFBP1Q8TBY8 1022 aa25.52■■□□□ 1.68
SPIDR-207ENST00000518692 TRPC5Q9UL62 973 aaPredicted RBP25.52■■□□□ 1.68
SPIDR-207ENST00000518692 ARHGEF28Q8N1W1 1705 aaKnown RBP25.51■■□□□ 1.68
SPIDR-207ENST00000518692 PRR36Q9H6K5 1346 aa25.51■■□□□ 1.67
SPIDR-207ENST00000518692 TNS3Q68CZ2 1445 aa25.51■■□□□ 1.67
SPIDR-207ENST00000518692 SBNO1A3KN83 1393 aa25.48■■□□□ 1.67
SPIDR-207ENST00000518692 PSME1Q06323 249 aa25.48■■□□□ 1.67
SPIDR-207ENST00000518692 TULP4Q9NRJ4 1543 aa25.47■■□□□ 1.67
SPIDR-207ENST00000518692 WASLO00401 505 aaPredicted RBP25.47■■□□□ 1.67
SPIDR-207ENST00000518692 CABLES1Q8TDN4 633 aa25.47■■□□□ 1.67
SPIDR-207ENST00000518692 PLEKHG5O94827 1062 aa25.45■■□□□ 1.66
SPIDR-207ENST00000518692 SLIT2O94813 1529 aa25.45■■□□□ 1.66
SPIDR-207ENST00000518692 ABCA3Q99758 1704 aa25.45■■□□□ 1.66
SPIDR-207ENST00000518692 TRPM3Q9HCF6 1732 aaPredicted RBP25.45■■□□□ 1.66
SPIDR-207ENST00000518692 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.43■■□□□ 1.66
SPIDR-207ENST00000518692 KIAA1210Q9ULL0 1709 aa25.43■■□□□ 1.66
SPIDR-207ENST00000518692 LMOD2Q6P5Q4 547 aa25.42■■□□□ 1.66
SPIDR-207ENST00000518692 EIF3AQ14152 1382 aaKnown RBP25.42■■□□□ 1.66
SPIDR-207ENST00000518692 NBPF1Q3BBV0 1214 aa25.41■■□□□ 1.66
SPIDR-207ENST00000518692 ARHGEF10O15013 1369 aa25.41■■□□□ 1.66
SPIDR-207ENST00000518692 GJD4Q96KN9 370 aaPredicted RBP25.4■■□□□ 1.66
SPIDR-207ENST00000518692 ALS2Q96Q42 1657 aa25.39■■□□□ 1.66
SPIDR-207ENST00000518692 UNC5CLQ8IV45 518 aa25.39■■□□□ 1.66
SPIDR-207ENST00000518692 ATP7BP35670 1465 aa25.39■■□□□ 1.65
SPIDR-207ENST00000518692 HAP1P54257 671 aaPredicted RBP25.38■■□□□ 1.65
SPIDR-207ENST00000518692 GLI3P10071 1580 aa25.38■■□□□ 1.65
SPIDR-207ENST00000518692 PLCH1Q4KWH8 1693 aa25.36■■□□□ 1.65
SPIDR-207ENST00000518692 RALGAPBQ86X10 1494 aa25.36■■□□□ 1.65
SPIDR-207ENST00000518692 GPRASP1Q5JY77 1395 aa25.36■■□□□ 1.65
SPIDR-207ENST00000518692 NUDT16Q96DE0 195 aaKnown RBP25.36■■□□□ 1.65
SPIDR-207ENST00000518692 ITSN1Q15811 1721 aa25.34■■□□□ 1.65
SPIDR-207ENST00000518692 ATAD2Q6PL18 1390 aa25.34■■□□□ 1.65
SPIDR-207ENST00000518692 NGDNQ8NEJ9 315 aaKnown RBP25.34■■□□□ 1.65
SPIDR-207ENST00000518692 CDK19Q9BWU1 502 aa25.34■■□□□ 1.65
SPIDR-207ENST00000518692 SIN3AQ96ST3 1273 aa25.33■■□□□ 1.65
SPIDR-207ENST00000518692 NWD2Q9ULI1 1742 aa25.32■■□□□ 1.64
SPIDR-207ENST00000518692 FAM83GA6ND36 823 aa25.32■■□□□ 1.64
SPIDR-207ENST00000518692 L3MBTL2Q969R5 705 aa25.32■■□□□ 1.64
SPIDR-207ENST00000518692 CRYBG1Q9Y4K1 1723 aa25.31■■□□□ 1.64
SPIDR-207ENST00000518692 TOPAZ1Q8N9V7 1692 aa25.3■■□□□ 1.64
SPIDR-207ENST00000518692 EP400Q96L91 3159 aa25.29■■□□□ 1.64
SPIDR-207ENST00000518692 PAK3O75914 559 aaPredicted RBP25.28■■□□□ 1.64
SPIDR-207ENST00000518692 VPS72Q15906 364 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms