RNA–Protein interactions for RNA: ENST00000518585.1

CTNNA1-209, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-209ENST00000518585 KIFC2Q96AC6 838 aa7.98□□□□□ -1.13
CTNNA1-209ENST00000518585 MSS51Q4VC12 460 aa7.97□□□□□ -1.13
CTNNA1-209ENST00000518585 SULF1Q8IWU6 871 aa7.97□□□□□ -1.13
CTNNA1-209ENST00000518585 FECHP22830 423 aa7.96□□□□□ -1.14
CTNNA1-209ENST00000518585 TRIM32Q13049 653 aa7.96□□□□□ -1.14
CTNNA1-209ENST00000518585 GRIPAP1Q4V328 841 aa7.96□□□□□ -1.14
CTNNA1-209ENST00000518585 BRICD5Q6PL45 260 aa7.96□□□□□ -1.14
CTNNA1-209ENST00000518585 MRGPRX2Q96LB1 330 aa7.96□□□□□ -1.14
CTNNA1-209ENST00000518585 REPIN1Q9BWE0 567 aaKnown RBP7.96□□□□□ -1.14
CTNNA1-209ENST00000518585 GCGRP47871 477 aa7.95□□□□□ -1.14
CTNNA1-209ENST00000518585 P3H3Q8IVL6 736 aa7.95□□□□□ -1.14
CTNNA1-209ENST00000518585 SLC16A10Q8TF71 515 aa7.95□□□□□ -1.14
CTNNA1-209ENST00000518585 J3QL48 77 aa7.93□□□□□ -1.14
CTNNA1-209ENST00000518585 RNF19BQ6ZMZ0 732 aa7.93□□□□□ -1.14
CTNNA1-209ENST00000518585 Q3C1V9 767 aa7.92□□□□□ -1.14
CTNNA1-209ENST00000518585 LCE2CQ5TA81 110 aa7.92□□□□□ -1.14
CTNNA1-209ENST00000518585 SEMA3EO15041 775 aa7.91□□□□□ -1.14
CTNNA1-209ENST00000518585 GNPATO15228 680 aa7.91□□□□□ -1.14
CTNNA1-209ENST00000518585 HPS1Q92902 700 aa7.91□□□□□ -1.14
CTNNA1-209ENST00000518585 MMP16P51512 607 aa7.89□□□□□ -1.15
CTNNA1-209ENST00000518585 NXF1Q9UBU9 619 aaKnown RBP7.89□□□□□ -1.15
CTNNA1-209ENST00000518585 SMYD5Q6GMV2 418 aa7.88□□□□□ -1.15
CTNNA1-209ENST00000518585 NLRP7Q8WX94 980 aa7.88□□□□□ -1.15
CTNNA1-209ENST00000518585 TSHZ2Q9NRE2 1034 aa7.88□□□□□ -1.15
CTNNA1-209ENST00000518585 AMER1Q5JTC6 1135 aaPredicted RBP7.87□□□□□ -1.15
CTNNA1-209ENST00000518585 CCDC24Q8N4L8 307 aa7.87□□□□□ -1.15
CTNNA1-209ENST00000518585 ZSCAN1Q8NBB4 408 aa7.87□□□□□ -1.15
CTNNA1-209ENST00000518585 IRF7Q92985 503 aa7.87□□□□□ -1.15
CTNNA1-209ENST00000518585 WNT7BP56706 349 aa7.86□□□□□ -1.15
CTNNA1-209ENST00000518585 RC3H1Q5TC82 1133 aaKnown RBP7.86□□□□□ -1.15
CTNNA1-209ENST00000518585 USB1Q9BQ65 265 aaKnown RBP7.86□□□□□ -1.15
CTNNA1-209ENST00000518585 ALDH1A1P00352 501 aa7.85□□□□□ -1.15
CTNNA1-209ENST00000518585 RBM26Q5T8P6 1007 aaKnown RBP7.85□□□□□ -1.15
CTNNA1-209ENST00000518585 NPAS3Q8IXF0 933 aa7.85□□□□□ -1.15
CTNNA1-209ENST00000518585 DXOO77932 396 aaKnown RBP7.84□□□□□ -1.15
CTNNA1-209ENST00000518585 GMPRP36959 345 aa7.84□□□□□ -1.15
CTNNA1-209ENST00000518585 SKOR1P84550 965 aa7.81□□□□□ -1.16
CTNNA1-209ENST00000518585 WASF2Q9Y6W5 498 aa7.81□□□□□ -1.16
CTNNA1-209ENST00000518585 CAPN5O15484 640 aaPredicted RBP7.8□□□□□ -1.16
CTNNA1-209ENST00000518585 KDM4AO75164 1064 aa7.8□□□□□ -1.16
CTNNA1-209ENST00000518585 BMP1P13497 986 aa7.8□□□□□ -1.16
CTNNA1-209ENST00000518585 EHBP1Q8NDI1 1231 aa7.8□□□□□ -1.16
CTNNA1-209ENST00000518585 PHOX2BQ99453 314 aa7.8□□□□□ -1.16
CTNNA1-209ENST00000518585 TESPA1A2RU30 521 aaPredicted RBP7.79□□□□□ -1.16
CTNNA1-209ENST00000518585 GPR37O15354 613 aa7.79□□□□□ -1.16
CTNNA1-209ENST00000518585 LOC100996750A0A140TA64 210 aa7.78□□□□□ -1.16
CTNNA1-209ENST00000518585 H3BM21 787 aa7.78□□□□□ -1.16
CTNNA1-209ENST00000518585 CD46P15529 392 aa7.78□□□□□ -1.16
CTNNA1-209ENST00000518585 VEGFBP49765 207 aa7.78□□□□□ -1.16
CTNNA1-209ENST00000518585 TRIM46Q7Z4K8 759 aa7.78□□□□□ -1.16
CTNNA1-209ENST00000518585 KRTAP4-6Q9BYQ5 205 aa7.78□□□□□ -1.16
CTNNA1-209ENST00000518585 USP46P62068 366 aa7.77□□□□□ -1.17
CTNNA1-209ENST00000518585 LORP23490 312 aaPredicted RBP7.76□□□□□ -1.17
CTNNA1-209ENST00000518585 JUNDP17535 347 aa7.75□□□□□ -1.17
CTNNA1-209ENST00000518585 GPIHBP1Q8IV16 184 aa7.74□□□□□ -1.17
CTNNA1-209ENST00000518585 NUDT12Q9BQG2 462 aa7.74□□□□□ -1.17
CTNNA1-209ENST00000518585 ERBB4Q15303 1308 aa7.74□□□□□ -1.17
CTNNA1-209ENST00000518585 SIAH2O43255 324 aa7.73□□□□□ -1.17
CTNNA1-209ENST00000518585 HLA-CQ95604 372 aa7.73□□□□□ -1.17
CTNNA1-209ENST00000518585 HOXA2O43364 376 aa7.72□□□□□ -1.17
CTNNA1-209ENST00000518585 ZFP42Q96MM3 310 aa7.72□□□□□ -1.17
CTNNA1-209ENST00000518585 RTN4Q9NQC3 1192 aaKnown RBP7.72□□□□□ -1.17
CTNNA1-209ENST00000518585 SCARF1Q14162 830 aa7.7□□□□□ -1.18
CTNNA1-209ENST00000518585 RB1CC1Q8TDY2 1594 aa7.69□□□□□ -1.18
CTNNA1-209ENST00000518585 RETREG3Q86VR2 466 aa7.69□□□□□ -1.18
CTNNA1-209ENST00000518585 PLEKHG3A1L390 1219 aa7.68□□□□□ -1.18
CTNNA1-209ENST00000518585 SH3BP2P78314 561 aa7.68□□□□□ -1.18
CTNNA1-209ENST00000518585 GUCA2AQ02747 115 aa7.68□□□□□ -1.18
CTNNA1-209ENST00000518585 SUZ12Q15022 739 aaKnown RBP7.68□□□□□ -1.18
CTNNA1-209ENST00000518585 PTCRAQ6ISU1 281 aaPredicted RBP7.68□□□□□ -1.18
CTNNA1-209ENST00000518585 MRPL14Q6P1L8 145 aaKnown RBP7.68□□□□□ -1.18
CTNNA1-209ENST00000518585 NACADO15069 1562 aa7.67□□□□□ -1.18
CTNNA1-209ENST00000518585 CCNYL3P0C7X3 344 aa7.67□□□□□ -1.18
CTNNA1-209ENST00000518585 MDM2Q00987 491 aaPredicted RBP7.67□□□□□ -1.18
CTNNA1-209ENST00000518585 SYMPKQ92797 1274 aaKnown RBP7.67□□□□□ -1.18
CTNNA1-209ENST00000518585 MAP2K5Q13163 448 aa7.66□□□□□ -1.18
CTNNA1-209ENST00000518585 NNTQ13423 1086 aa7.66□□□□□ -1.18
CTNNA1-209ENST00000518585 NUTM1Q86Y26 1132 aa7.66□□□□□ -1.18
CTNNA1-209ENST00000518585 TLL2Q9Y6L7 1015 aa7.66□□□□□ -1.18
CTNNA1-209ENST00000518585 VSIG8P0DPA2 414 aa7.65□□□□□ -1.18
CTNNA1-209ENST00000518585 MS4A1P11836 297 aa7.65□□□□□ -1.18
CTNNA1-209ENST00000518585 PURBQ96QR8 312 aaKnown RBP7.65□□□□□ -1.18
CTNNA1-209ENST00000518585 ADH1CP00326 375 aa7.64□□□□□ -1.19
CTNNA1-209ENST00000518585 KCNMA1Q12791 1236 aa7.64□□□□□ -1.19
CTNNA1-209ENST00000518585 LINC01559Q495D7 138 aa7.64□□□□□ -1.19
CTNNA1-209ENST00000518585 UNC93B1Q9H1C4 597 aa7.64□□□□□ -1.19
CTNNA1-209ENST00000518585 ZCCHC6Q5VYS8 1495 aaKnown RBP7.63□□□□□ -1.19
CTNNA1-209ENST00000518585 C6orf229H3BNL8 230 aa7.63□□□□□ -1.19
CTNNA1-209ENST00000518585 VARSP26640 1264 aaKnown RBP7.63□□□□□ -1.19
CTNNA1-209ENST00000518585 FDX1P10109 184 aa7.62□□□□□ -1.19
CTNNA1-209ENST00000518585 WDR4P57081 412 aaKnown RBP7.62□□□□□ -1.19
CTNNA1-209ENST00000518585 PTPRNQ16849 979 aa7.62□□□□□ -1.19
CTNNA1-209ENST00000518585 MPNDQ8N594 471 aa7.62□□□□□ -1.19
CTNNA1-209ENST00000518585 KCTD17Q8N5Z5 321 aa7.62□□□□□ -1.19
CTNNA1-209ENST00000518585 MYO15BQ96JP2 1530 aa7.62□□□□□ -1.19
CTNNA1-209ENST00000518585 SOBPA7XYQ1 873 aa7.61□□□□□ -1.19
CTNNA1-209ENST00000518585 IRF6O14896 467 aa7.61□□□□□ -1.19
CTNNA1-209ENST00000518585 MAN1A2O60476 641 aa7.61□□□□□ -1.19
CTNNA1-209ENST00000518585 BAP1Q92560 729 aa7.61□□□□□ -1.19
CTNNA1-209ENST00000518585 GPCPD1Q9NPB8 672 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms