RNA–Protein interactions for RNA: ENST00000518504.5

SMN1-210, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 5

Gene SMN1, Length 453 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-210ENST00000518504 MSS51Q4VC12 460 aa10.2□□□□□ -0.78
SMN1-210ENST00000518504 SMPD1P17405 629 aa10.19□□□□□ -0.78
SMN1-210ENST00000518504 J3QL48 77 aa10.18□□□□□ -0.78
SMN1-210ENST00000518504 TRIM32Q13049 653 aa10.18□□□□□ -0.78
SMN1-210ENST00000518504 MRGPRX2Q96LB1 330 aa10.18□□□□□ -0.78
SMN1-210ENST00000518504 WNT7AO00755 349 aa10.17□□□□□ -0.78
SMN1-210ENST00000518504 SMCPP49901 116 aaPredicted RBP10.17□□□□□ -0.78
SMN1-210ENST00000518504 GRIPAP1Q4V328 841 aa10.17□□□□□ -0.78
SMN1-210ENST00000518504 NFX1Q12986 1120 aaKnown RBP10.16□□□□□ -0.78
SMN1-210ENST00000518504 GPIHBP1Q8IV16 184 aa10.16□□□□□ -0.78
SMN1-210ENST00000518504 SNIP1Q8TAD8 396 aaKnown RBP10.16□□□□□ -0.78
SMN1-210ENST00000518504 HLA-CQ95604 372 aa10.16□□□□□ -0.78
SMN1-210ENST00000518504 SNRPBP14678 240 aaKnown RBP10.15□□□□□ -0.78
SMN1-210ENST00000518504 CCDC24Q8N4L8 307 aa10.15□□□□□ -0.78
SMN1-210ENST00000518504 ATP13A2Q9NQ11 1180 aa10.15□□□□□ -0.78
SMN1-210ENST00000518504 MMP16P51512 607 aa10.13□□□□□ -0.79
SMN1-210ENST00000518504 Q3C1V9 767 aa10.13□□□□□ -0.79
SMN1-210ENST00000518504 HPS1Q92902 700 aa10.13□□□□□ -0.79
SMN1-210ENST00000518504 CD46P15529 392 aa10.12□□□□□ -0.79
SMN1-210ENST00000518504 USB1Q9BQ65 265 aaKnown RBP10.11□□□□□ -0.79
SMN1-210ENST00000518504 KDM4AO75164 1064 aa10.1□□□□□ -0.79
SMN1-210ENST00000518504 LCE2CQ5TA81 110 aa10.1□□□□□ -0.79
SMN1-210ENST00000518504 DXOO77932 396 aaKnown RBP10.09□□□□□ -0.79
SMN1-210ENST00000518504 GUCA2AQ02747 115 aa10.09□□□□□ -0.79
SMN1-210ENST00000518504 SKOR1P84550 965 aa10.08□□□□□ -0.8
SMN1-210ENST00000518504 MDM2Q00987 491 aaPredicted RBP10.08□□□□□ -0.8
SMN1-210ENST00000518504 RC3H1Q5TC82 1133 aaKnown RBP10.07□□□□□ -0.8
SMN1-210ENST00000518504 TRIM47Q96LD4 638 aa10.07□□□□□ -0.8
SMN1-210ENST00000518504 TERTO14746 1132 aaKnown RBP10.06□□□□□ -0.8
SMN1-210ENST00000518504 SYMPKQ92797 1274 aaKnown RBP10.06□□□□□ -0.8
SMN1-210ENST00000518504 WIPF1O43516 503 aa10.05□□□□□ -0.8
SMN1-210ENST00000518504 REPIN1Q9BWE0 567 aaKnown RBP10.05□□□□□ -0.8
SMN1-210ENST00000518504 PLCB2Q00722 1185 aa10.04□□□□□ -0.8
SMN1-210ENST00000518504 SENP2Q9HC62 589 aa10.04□□□□□ -0.8
SMN1-210ENST00000518504 STK17AQ9UEE5 414 aa10.04□□□□□ -0.8
SMN1-210ENST00000518504 HOXA2O43364 376 aa10.03□□□□□ -0.8
SMN1-210ENST00000518504 ALDH1A1P00352 501 aa10.03□□□□□ -0.8
SMN1-210ENST00000518504 MAP2K5Q13163 448 aa10.03□□□□□ -0.8
SMN1-210ENST00000518504 INSM1Q01101 510 aaPredicted RBP10.02□□□□□ -0.81
SMN1-210ENST00000518504 IRF6O14896 467 aa10.01□□□□□ -0.81
SMN1-210ENST00000518504 WNT7BP56706 349 aa10□□□□□ -0.81
SMN1-210ENST00000518504 USP46P62068 366 aa10□□□□□ -0.81
SMN1-210ENST00000518504 PTCRAQ6ISU1 281 aaPredicted RBP10□□□□□ -0.81
SMN1-210ENST00000518504 JUNDP17535 347 aa9.99□□□□□ -0.81
SMN1-210ENST00000518504 BMP1P13497 986 aa9.98□□□□□ -0.81
SMN1-210ENST00000518504 KIFC2Q96AC6 838 aa9.98□□□□□ -0.81
SMN1-210ENST00000518504 EHBP1Q8NDI1 1231 aa9.97□□□□□ -0.81
SMN1-210ENST00000518504 HAP1P54257 671 aaPredicted RBP9.96□□□□□ -0.82
SMN1-210ENST00000518504 CCDC102AQ96A19 550 aa9.96□□□□□ -0.82
SMN1-210ENST00000518504 NUDT12Q9BQG2 462 aa9.96□□□□□ -0.82
SMN1-210ENST00000518504 VEGFBP49765 207 aa9.95□□□□□ -0.82
SMN1-210ENST00000518504 KDM2AQ9Y2K7 1162 aa9.95□□□□□ -0.82
SMN1-210ENST00000518504 MINK1Q8N4C8 1332 aaPredicted RBP9.94□□□□□ -0.82
SMN1-210ENST00000518504 SIAH2O43255 324 aa9.94□□□□□ -0.82
SMN1-210ENST00000518504 TRIM46Q7Z4K8 759 aa9.94□□□□□ -0.82
SMN1-210ENST00000518504 NUTM1Q86Y26 1132 aa9.94□□□□□ -0.82
SMN1-210ENST00000518504 GPCPD1Q9NPB8 672 aa9.93□□□□□ -0.82
SMN1-210ENST00000518504 FAM217BQ9NTX9 383 aaPredicted RBP9.93□□□□□ -0.82
SMN1-210ENST00000518504 WASF2Q9Y6W5 498 aa9.93□□□□□ -0.82
SMN1-210ENST00000518504 CAPN5O15484 640 aaPredicted RBP9.92□□□□□ -0.82
SMN1-210ENST00000518504 RETREG3Q86VR2 466 aa9.92□□□□□ -0.82
SMN1-210ENST00000518504 NXF1Q9UBU9 619 aaKnown RBP9.92□□□□□ -0.82
SMN1-210ENST00000518504 PCDHGC3Q9UN70 934 aa9.92□□□□□ -0.82
SMN1-210ENST00000518504 C6orf229H3BNL8 230 aa9.91□□□□□ -0.82
SMN1-210ENST00000518504 SH3BP2P78314 561 aa9.91□□□□□ -0.82
SMN1-210ENST00000518504 SLC16A10Q8TF71 515 aa9.91□□□□□ -0.82
SMN1-210ENST00000518504 GMPRP36959 345 aa9.9□□□□□ -0.82
SMN1-210ENST00000518504 LINC01559Q495D7 138 aa9.9□□□□□ -0.82
SMN1-210ENST00000518504 FDX1P10109 184 aa9.89□□□□□ -0.83
SMN1-210ENST00000518504 CLCN1P35523 988 aa9.89□□□□□ -0.83
SMN1-210ENST00000518504 KRI1Q8N9T8 703 aaKnown RBP9.89□□□□□ -0.83
SMN1-210ENST00000518504 TLL2Q9Y6L7 1015 aa9.89□□□□□ -0.83
SMN1-210ENST00000518504 MS4A1P11836 297 aa9.88□□□□□ -0.83
SMN1-210ENST00000518504 CCNYL3P0C7X3 344 aa9.87□□□□□ -0.83
SMN1-210ENST00000518504 TULP1O00294 542 aaPredicted RBP9.86□□□□□ -0.83
SMN1-210ENST00000518504 NDUFV2P19404 249 aa9.86□□□□□ -0.83
SMN1-210ENST00000518504 BAP1Q92560 729 aa9.86□□□□□ -0.83
SMN1-210ENST00000518504 ZFP42Q96MM3 310 aa9.86□□□□□ -0.83
SMN1-210ENST00000518504 UNC93B1Q9H1C4 597 aa9.86□□□□□ -0.83
SMN1-210ENST00000518504 IRF7Q92985 503 aa9.84□□□□□ -0.83
SMN1-210ENST00000518504 ERBB4Q15303 1308 aa9.83□□□□□ -0.84
SMN1-210ENST00000518504 LORP23490 312 aaPredicted RBP9.83□□□□□ -0.84
SMN1-210ENST00000518504 SPIRE2Q8WWL2 714 aa9.83□□□□□ -0.84
SMN1-210ENST00000518504 MOXD2PA6NHM9 499 aa9.82□□□□□ -0.84
SMN1-210ENST00000518504 SSTR3P32745 418 aaPredicted RBP9.82□□□□□ -0.84
SMN1-210ENST00000518504 ZSCAN1Q8NBB4 408 aa9.82□□□□□ -0.84
SMN1-210ENST00000518504 EVA1BQ9NVM1 165 aa9.82□□□□□ -0.84
SMN1-210ENST00000518504 SOBPA7XYQ1 873 aa9.81□□□□□ -0.84
SMN1-210ENST00000518504 H3BM21 787 aa9.81□□□□□ -0.84
SMN1-210ENST00000518504 NNTQ13423 1086 aa9.81□□□□□ -0.84
SMN1-210ENST00000518504 PTPRNQ16849 979 aa9.81□□□□□ -0.84
SMN1-210ENST00000518504 PRR7Q8TB68 274 aa9.81□□□□□ -0.84
SMN1-210ENST00000518504 KCNH2Q12809 1159 aa9.8□□□□□ -0.84
SMN1-210ENST00000518504 FAM181BA6NEQ2 426 aa9.79□□□□□ -0.84
SMN1-210ENST00000518504 ZNF511Q8NB15 262 aa9.79□□□□□ -0.84
SMN1-210ENST00000518504 PURBQ96QR8 312 aaKnown RBP9.79□□□□□ -0.84
SMN1-210ENST00000518504 MRPL14Q6P1L8 145 aaKnown RBP9.77□□□□□ -0.85
SMN1-210ENST00000518504 NPAS3Q8IXF0 933 aa9.77□□□□□ -0.85
SMN1-210ENST00000518504 TIMP2P16035 220 aa9.76□□□□□ -0.85
SMN1-210ENST00000518504 VARSP26640 1264 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms