RNA–Protein interactions for RNA: ENST00000518343.5

MSR1-208, Transcript of macrophage scavenger receptor 1, humanhuman

TSL 4

Gene MSR1, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-208ENST00000518343 MST1RQ04912 1400 aa8.71□□□□□ -1.02
MSR1-208ENST00000518343 ADGRL3Q9HAR2 1447 aa8.71□□□□□ -1.02
MSR1-208ENST00000518343 SRCAPQ6ZRS2 3230 aa8.7□□□□□ -1.02
MSR1-208ENST00000518343 LAMC1P11047 1609 aa8.7□□□□□ -1.02
MSR1-208ENST00000518343 NUTM2DQ5VT03 806 aaPredicted RBP8.7□□□□□ -1.02
MSR1-208ENST00000518343 REM2Q8IYK8 340 aaPredicted RBP8.7□□□□□ -1.02
MSR1-208ENST00000518343 C8orf37Q96NL8 207 aa8.7□□□□□ -1.02
MSR1-208ENST00000518343 XRN1Q8IZH2 1706 aaKnown RBP8.7□□□□□ -1.02
MSR1-208ENST00000518343 RGS12O14924 1447 aa8.7□□□□□ -1.02
MSR1-208ENST00000518343 PIP4P2Q8N4L2 257 aa8.69□□□□□ -1.02
MSR1-208ENST00000518343 PNPLA6Q8IY17 1366 aa8.69□□□□□ -1.02
MSR1-208ENST00000518343 E9PCH4 1651 aa8.68□□□□□ -1.02
MSR1-208ENST00000518343 LRPPRCP42704 1394 aaKnown RBP8.67□□□□□ -1.02
MSR1-208ENST00000518343 FAM50AQ14320 339 aaKnown RBP8.67□□□□□ -1.02
MSR1-208ENST00000518343 FNBP4Q8N3X1 1017 aaPredicted RBP8.67□□□□□ -1.02
MSR1-208ENST00000518343 USP21Q9UK80 565 aa8.67□□□□□ -1.02
MSR1-208ENST00000518343 PRAG1Q86YV5 1406 aa8.66□□□□□ -1.02
MSR1-208ENST00000518343 SOS2Q07890 1332 aaPredicted RBP8.66□□□□□ -1.02
MSR1-208ENST00000518343 PTPRUQ92729 1446 aa8.65□□□□□ -1.02
MSR1-208ENST00000518343 NUP155O75694 1391 aa8.65□□□□□ -1.02
MSR1-208ENST00000518343 NPHP3Q7Z494 1330 aa8.65□□□□□ -1.02
MSR1-208ENST00000518343 VGFO15240 615 aaPredicted RBP8.65□□□□□ -1.02
MSR1-208ENST00000518343 ZNF326Q5BKZ1 582 aaKnown RBP8.65□□□□□ -1.02
MSR1-208ENST00000518343 COL22A1Q8NFW1 1626 aaPredicted RBP8.65□□□□□ -1.03
MSR1-208ENST00000518343 C1orf167Q5SNV9 1468 aa8.64□□□□□ -1.03
MSR1-208ENST00000518343 HFM1A2PYH4 1435 aa8.64□□□□□ -1.03
MSR1-208ENST00000518343 ATRNO75882 1429 aa8.63□□□□□ -1.03
MSR1-208ENST00000518343 SPHKAPQ2M3C7 1700 aa8.63□□□□□ -1.03
MSR1-208ENST00000518343 RPGRIP1LQ68CZ1 1315 aa8.63□□□□□ -1.03
MSR1-208ENST00000518343 NRXN3Q9Y4C0 1643 aa8.63□□□□□ -1.03
MSR1-208ENST00000518343 PITPNM1O00562 1244 aa8.63□□□□□ -1.03
MSR1-208ENST00000518343 ADAMTS2O95450 1211 aa8.63□□□□□ -1.03
MSR1-208ENST00000518343 SF3B2Q13435 895 aaKnown RBP8.63□□□□□ -1.03
MSR1-208ENST00000518343 ZBTB12Q9Y330 459 aaPredicted RBP8.63□□□□□ -1.03
MSR1-208ENST00000518343 BLMP54132 1417 aaPredicted RBP8.63□□□□□ -1.03
MSR1-208ENST00000518343 NALCNQ8IZF0 1738 aa8.62□□□□□ -1.03
MSR1-208ENST00000518343 EP400Q96L91 3159 aa8.62□□□□□ -1.03
MSR1-208ENST00000518343 METP08581 1390 aa8.61□□□□□ -1.03
MSR1-208ENST00000518343 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.61□□□□□ -1.03
MSR1-208ENST00000518343 KIF1BO60333 1816 aa8.61□□□□□ -1.03
MSR1-208ENST00000518343 MARF1Q9Y4F3 1742 aaKnown RBP8.6□□□□□ -1.03
MSR1-208ENST00000518343 MYOM2P54296 1465 aa8.6□□□□□ -1.03
MSR1-208ENST00000518343 GJD4Q96KN9 370 aaPredicted RBP8.6□□□□□ -1.03
MSR1-208ENST00000518343 FXR2P51116 673 aaKnown RBP eCLIP8.59□□□□□ -1.03
MSR1-208ENST00000518343 CDC42BPGQ6DT37 1551 aa8.59□□□□□ -1.03
MSR1-208ENST00000518343 NEXMIFQ5QGS0 1516 aa8.59□□□□□ -1.03
MSR1-208ENST00000518343 LRP5O75197 1615 aa8.58□□□□□ -1.04
MSR1-208ENST00000518343 LOC105371045A0A1W2PR82 267 aa8.58□□□□□ -1.04
MSR1-208ENST00000518343 UNC5CLQ8IV45 518 aa8.58□□□□□ -1.04
MSR1-208ENST00000518343 BCL9LQ86UU0 1499 aa8.57□□□□□ -1.04
MSR1-208ENST00000518343 CCDC144AA2RUR9 1427 aa8.57□□□□□ -1.04
MSR1-208ENST00000518343 ACIN1Q9UKV3 1341 aaKnown RBP8.56□□□□□ -1.04
MSR1-208ENST00000518343 ESCO1Q5FWF5 840 aa8.56□□□□□ -1.04
MSR1-208ENST00000518343 ORAI2Q96SN7 254 aa8.56□□□□□ -1.04
MSR1-208ENST00000518343 KIF1AQ12756 1690 aa8.56□□□□□ -1.04
MSR1-208ENST00000518343 EVX2Q03828 476 aa8.55□□□□□ -1.04
MSR1-208ENST00000518343 PSME1Q06323 249 aa8.55□□□□□ -1.04
MSR1-208ENST00000518343 DDX17Q92841 729 aaKnown RBP8.55□□□□□ -1.04
MSR1-208ENST00000518343 ROBO2Q9HCK4 1378 aa8.55□□□□□ -1.04
MSR1-208ENST00000518343 PXDNQ92626 1479 aa8.55□□□□□ -1.04
MSR1-208ENST00000518343 SLIT2O94813 1529 aa8.54□□□□□ -1.04
MSR1-208ENST00000518343 ARHGEF10O15013 1369 aa8.54□□□□□ -1.04
MSR1-208ENST00000518343 HAX1O00165 279 aa8.54□□□□□ -1.04
MSR1-208ENST00000518343 ONECUT3O60422 494 aaPredicted RBP8.54□□□□□ -1.04
MSR1-208ENST00000518343 BAG6P46379 1132 aa8.54□□□□□ -1.04
MSR1-208ENST00000518343 NWD2Q9ULI1 1742 aa8.54□□□□□ -1.04
MSR1-208ENST00000518343 CLTCL1P53675 1640 aa8.54□□□□□ -1.04
MSR1-208ENST00000518343 TECPR2O15040 1411 aa8.54□□□□□ -1.04
MSR1-208ENST00000518343 RALGAPBQ86X10 1494 aa8.53□□□□□ -1.04
MSR1-208ENST00000518343 ANKRD30BQ9BXX2 1392 aa8.53□□□□□ -1.04
MSR1-208ENST00000518343 HAP1P54257 671 aaPredicted RBP8.53□□□□□ -1.04
MSR1-208ENST00000518343 VPS72Q15906 364 aa8.53□□□□□ -1.04
MSR1-208ENST00000518343 SPATA31A3Q5VYP0 1347 aa8.53□□□□□ -1.04
MSR1-208ENST00000518343 ABCC11Q96J66 1382 aa8.52□□□□□ -1.05
MSR1-208ENST00000518343 USP32Q8NFA0 1604 aa8.52□□□□□ -1.05
MSR1-208ENST00000518343 FOXO3O43524 673 aa8.52□□□□□ -1.05
MSR1-208ENST00000518343 KRT27Q7Z3Y8 459 aa8.52□□□□□ -1.05
MSR1-208ENST00000518343 SIRT1Q96EB6 747 aa8.52□□□□□ -1.05
MSR1-208ENST00000518343 SBNO1A3KN83 1393 aa8.51□□□□□ -1.05
MSR1-208ENST00000518343 SEPT12Q8IYM1 358 aa8.51□□□□□ -1.05
MSR1-208ENST00000518343 NAIPQ13075 1403 aa8.51□□□□□ -1.05
MSR1-208ENST00000518343 PPLO60437 1756 aa8.5□□□□□ -1.05
MSR1-208ENST00000518343 C11orf95C9JLR9 678 aaPredicted RBP8.5□□□□□ -1.05
MSR1-208ENST00000518343 GLI3P10071 1580 aa8.5□□□□□ -1.05
MSR1-208ENST00000518343 EIF3AQ14152 1382 aaKnown RBP8.49□□□□□ -1.05
MSR1-208ENST00000518343 PARD3Q8TEW0 1356 aa8.49□□□□□ -1.05
MSR1-208ENST00000518343 KNDC1Q76NI1 1749 aa8.49□□□□□ -1.05
MSR1-208ENST00000518343 DISP2A7MBM2 1401 aa8.49□□□□□ -1.05
MSR1-208ENST00000518343 TNS3Q68CZ2 1445 aa8.49□□□□□ -1.05
MSR1-208ENST00000518343 ATXN8OSP0DMR3 200 aa8.49□□□□□ -1.05
MSR1-208ENST00000518343 RRBP1Q9P2E9 1410 aaKnown RBP8.48□□□□□ -1.05
MSR1-208ENST00000518343 KRT28Q7Z3Y7 464 aa8.48□□□□□ -1.05
MSR1-208ENST00000518343 CCDC9Q9Y3X0 531 aaKnown RBP8.48□□□□□ -1.05
MSR1-208ENST00000518343 RGPD1P0DJD0 1748 aa8.48□□□□□ -1.05
MSR1-208ENST00000518343 FMN2Q9NZ56 1722 aa8.48□□□□□ -1.05
MSR1-208ENST00000518343 ADGRB2O60241 1585 aa8.48□□□□□ -1.05
MSR1-208ENST00000518343 BRWD3Q6RI45 1802 aa8.47□□□□□ -1.05
MSR1-208ENST00000518343 HRCP23327 699 aa8.47□□□□□ -1.05
MSR1-208ENST00000518343 ANKARQ7Z5J8 1434 aa8.46□□□□□ -1.05
MSR1-208ENST00000518343 ITGAEP38570 1179 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms