RNA–Protein interactions for RNA: ENST00000518040.5

SH2D4A-202, Transcript of SH2 domain containing 4A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SH2D4A, Length 1,697 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-202ENST00000518040 EP400Q96L91 3159 aa15.26■□□□□ 0.03
SH2D4A-202ENST00000518040 NALCNQ8IZF0 1738 aa15.26■□□□□ 0.03
SH2D4A-202ENST00000518040 BLMP54132 1417 aaPredicted RBP15.26■□□□□ 0.03
SH2D4A-202ENST00000518040 U3KPZ7 1027 aaPredicted RBP15.25■□□□□ 0.03
SH2D4A-202ENST00000518040 COL22A1Q8NFW1 1626 aaPredicted RBP15.25■□□□□ 0.03
SH2D4A-202ENST00000518040 GJD4Q96KN9 370 aaPredicted RBP15.24■□□□□ 0.03
SH2D4A-202ENST00000518040 SF3B2Q13435 895 aaKnown RBP15.23■□□□□ 0.03
SH2D4A-202ENST00000518040 FAM50AQ14320 339 aaKnown RBP15.23■□□□□ 0.03
SH2D4A-202ENST00000518040 ZNF326Q5BKZ1 582 aaKnown RBP15.23■□□□□ 0.03
SH2D4A-202ENST00000518040 LRP5O75197 1615 aa15.23■□□□□ 0.03
SH2D4A-202ENST00000518040 BCL9LQ86UU0 1499 aa15.23■□□□□ 0.03
SH2D4A-202ENST00000518040 MYOM2P54296 1465 aa15.21■□□□□ 0.03
SH2D4A-202ENST00000518040 ORAI2Q96SN7 254 aa15.21■□□□□ 0.03
SH2D4A-202ENST00000518040 NPHP3Q7Z494 1330 aa15.21■□□□□ 0.02
SH2D4A-202ENST00000518040 NUP155O75694 1391 aa15.2■□□□□ 0.02
SH2D4A-202ENST00000518040 ROCK1Q13464 1354 aa15.19■□□□□ 0.02
SH2D4A-202ENST00000518040 MARF1Q9Y4F3 1742 aaKnown RBP15.19■□□□□ 0.02
SH2D4A-202ENST00000518040 SPHKAPQ2M3C7 1700 aa15.18■□□□□ 0.02
SH2D4A-202ENST00000518040 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.18■□□□□ 0.02
SH2D4A-202ENST00000518040 UNC5CLQ8IV45 518 aa15.17■□□□□ 0.02
SH2D4A-202ENST00000518040 LRPPRCP42704 1394 aaKnown RBP15.17■□□□□ 0.02
SH2D4A-202ENST00000518040 PRAG1Q86YV5 1406 aa15.17■□□□□ 0.02
SH2D4A-202ENST00000518040 HFM1A2PYH4 1435 aa15.15■□□□□ 0.02
SH2D4A-202ENST00000518040 DEFB132Q7Z7B7 95 aa15.15■□□□□ 0.02
SH2D4A-202ENST00000518040 RALGAPBQ86X10 1494 aa15.15■□□□□ 0.02
SH2D4A-202ENST00000518040 LOC105371045A0A1W2PR82 267 aa15.14■□□□□ 0.01
SH2D4A-202ENST00000518040 SLC4A2P04920 1241 aa15.14■□□□□ 0.01
SH2D4A-202ENST00000518040 NEXMIFQ5QGS0 1516 aa15.14■□□□□ 0.01
SH2D4A-202ENST00000518040 PXDNQ92626 1479 aa15.13■□□□□ 0.01
SH2D4A-202ENST00000518040 ROBO2Q9HCK4 1378 aa15.13■□□□□ 0.01
SH2D4A-202ENST00000518040 VGFO15240 615 aaPredicted RBP15.13■□□□□ 0.01
SH2D4A-202ENST00000518040 ESCO1Q5FWF5 840 aa15.13■□□□□ 0.01
SH2D4A-202ENST00000518040 SLIT2O94813 1529 aa15.13■□□□□ 0.01
SH2D4A-202ENST00000518040 GLI3P10071 1580 aa15.12■□□□□ 0.01
SH2D4A-202ENST00000518040 BAG6P46379 1132 aa15.11■□□□□ 0.01
SH2D4A-202ENST00000518040 SEPT12Q8IYM1 358 aa15.1■□□□□ 0.01
SH2D4A-202ENST00000518040 CDC42BPGQ6DT37 1551 aa15.1■□□□□ 0.01
SH2D4A-202ENST00000518040 FOXO3O43524 673 aa15.09■□□□□ 0.01
SH2D4A-202ENST00000518040 HRCP23327 699 aa15.09■□□□□ 0.01
SH2D4A-202ENST00000518040 ONECUT3O60422 494 aaPredicted RBP15.09■□□□□ 0.01
SH2D4A-202ENST00000518040 BRWD3Q6RI45 1802 aa15.08■□□□□ 0
SH2D4A-202ENST00000518040 VPS72Q15906 364 aa15.08■□□□□ 0
SH2D4A-202ENST00000518040 KRT27Q7Z3Y8 459 aa15.08■□□□□ 0
SH2D4A-202ENST00000518040 KIF1BO60333 1816 aa15.07■□□□□ 0
SH2D4A-202ENST00000518040 RPGRIP1LQ68CZ1 1315 aa15.07■□□□□ 0
SH2D4A-202ENST00000518040 CLTCL1P53675 1640 aa15.06■□□□□ 0
SH2D4A-202ENST00000518040 SPATA31A3Q5VYP0 1347 aa15.05■□□□□ 0
SH2D4A-202ENST00000518040 USP32Q8NFA0 1604 aa15.05■□□□□ -0
SH2D4A-202ENST00000518040 PSDA5PKW4 1024 aaPredicted RBP15.05■□□□□ -0
SH2D4A-202ENST00000518040 XPCQ01831 940 aaPredicted RBP15.05■□□□□ -0
SH2D4A-202ENST00000518040 CCDC144AA2RUR9 1427 aa15.04■□□□□ -0
SH2D4A-202ENST00000518040 HAP1P54257 671 aaPredicted RBP15.04■□□□□ -0
SH2D4A-202ENST00000518040 CCDC9Q9Y3X0 531 aaKnown RBP15.03■□□□□ -0
SH2D4A-202ENST00000518040 NWD2Q9ULI1 1742 aa15.03■□□□□ -0
SH2D4A-202ENST00000518040 NAIPQ13075 1403 aa15.02□□□□□ -0.01
SH2D4A-202ENST00000518040 KIF1AQ12756 1690 aa15.01□□□□□ -0.01
SH2D4A-202ENST00000518040 PSME1Q06323 249 aa15□□□□□ -0.01
SH2D4A-202ENST00000518040 SPINK5Q9NQ38 1064 aaPredicted RBP15□□□□□ -0.01
SH2D4A-202ENST00000518040 KRT28Q7Z3Y7 464 aa15□□□□□ -0.01
SH2D4A-202ENST00000518040 A0A0G2JS52 829 aa14.99□□□□□ -0.01
SH2D4A-202ENST00000518040 MYT1Q01538 1121 aa14.99□□□□□ -0.01
SH2D4A-202ENST00000518040 YY1P25490 414 aa14.98□□□□□ -0.01
SH2D4A-202ENST00000518040 RGPD1P0DJD0 1748 aa14.98□□□□□ -0.01
SH2D4A-202ENST00000518040 DISP2A7MBM2 1401 aa14.98□□□□□ -0.01
SH2D4A-202ENST00000518040 TECPR2O15040 1411 aa14.98□□□□□ -0.01
SH2D4A-202ENST00000518040 TNS3Q68CZ2 1445 aa14.98□□□□□ -0.01
SH2D4A-202ENST00000518040 CAPN15O75808 1086 aa14.97□□□□□ -0.01
SH2D4A-202ENST00000518040 R3HDM1Q15032 1099 aaKnown RBP14.97□□□□□ -0.01
SH2D4A-202ENST00000518040 PLCH1Q4KWH8 1693 aa14.97□□□□□ -0.01
SH2D4A-202ENST00000518040 NUTM2FA1L443 756 aa14.97□□□□□ -0.01
SH2D4A-202ENST00000518040 EN1Q05925 392 aaPredicted RBP14.97□□□□□ -0.01
SH2D4A-202ENST00000518040 ARHGEF10O15013 1369 aa14.96□□□□□ -0.01
SH2D4A-202ENST00000518040 ITGAEP38570 1179 aa14.95□□□□□ -0.02
SH2D4A-202ENST00000518040 SBNO1A3KN83 1393 aa14.95□□□□□ -0.02
SH2D4A-202ENST00000518040 PPLO60437 1756 aa14.95□□□□□ -0.02
SH2D4A-202ENST00000518040 FMN2Q9NZ56 1722 aa14.94□□□□□ -0.02
SH2D4A-202ENST00000518040 ABCC11Q96J66 1382 aa14.94□□□□□ -0.02
SH2D4A-202ENST00000518040 FAM98CQ17RN3 349 aaKnown RBP14.93□□□□□ -0.02
SH2D4A-202ENST00000518040 WAPLQ7Z5K2 1190 aa14.93□□□□□ -0.02
SH2D4A-202ENST00000518040 PHF8Q9UPP1 1060 aa14.93□□□□□ -0.02
SH2D4A-202ENST00000518040 PARD3Q8TEW0 1356 aa14.92□□□□□ -0.02
SH2D4A-202ENST00000518040 CABLES1Q8TDN4 633 aa14.92□□□□□ -0.02
SH2D4A-202ENST00000518040 ADGRB2O60241 1585 aa14.91□□□□□ -0.02
SH2D4A-202ENST00000518040 FAM83GA6ND36 823 aa14.91□□□□□ -0.02
SH2D4A-202ENST00000518040 STK26Q9P289 416 aa14.91□□□□□ -0.02
SH2D4A-202ENST00000518040 SIRT1Q96EB6 747 aa14.9□□□□□ -0.02
SH2D4A-202ENST00000518040 KNDC1Q76NI1 1749 aa14.9□□□□□ -0.02
SH2D4A-202ENST00000518040 ABCA3Q99758 1704 aa14.9□□□□□ -0.02
SH2D4A-202ENST00000518040 LMOD2Q6P5Q4 547 aa14.9□□□□□ -0.02
SH2D4A-202ENST00000518040 DSG3P32926 999 aa14.89□□□□□ -0.03
SH2D4A-202ENST00000518040 BTG4Q9NY30 223 aa14.89□□□□□ -0.03
SH2D4A-202ENST00000518040 NRAPQ86VF7 1730 aa14.89□□□□□ -0.03
SH2D4A-202ENST00000518040 NRXN1Q9ULB1 1477 aa14.88□□□□□ -0.03
SH2D4A-202ENST00000518040 EZH2Q15910 746 aaKnown RBP14.88□□□□□ -0.03
SH2D4A-202ENST00000518040 RRBP1Q9P2E9 1410 aaKnown RBP14.88□□□□□ -0.03
SH2D4A-202ENST00000518040 FAM196AQ6ZSG2 479 aa14.87□□□□□ -0.03
SH2D4A-202ENST00000518040 CAMKK2Q96RR4 588 aa14.87□□□□□ -0.03
SH2D4A-202ENST00000518040 ANKRD30BQ9BXX2 1392 aa14.87□□□□□ -0.03
SH2D4A-202ENST00000518040 PLEKHH1Q9ULM0 1364 aa14.87□□□□□ -0.03
SH2D4A-202ENST00000518040 TNS1Q9HBL0 1735 aaKnown RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms