RNA–Protein interactions for RNA: ENST00000517484.5

EFCAB13-203, Transcript of EF-hand calcium binding domain 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene EFCAB13, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-203ENST00000517484 FOXO3O43524 673 aa12.92□□□□□ -0.34
EFCAB13-203ENST00000517484 YTHDC2Q9H6S0 1430 aaKnown RBP12.91□□□□□ -0.34
EFCAB13-203ENST00000517484 TMEM2Q9UHN6 1383 aa12.91□□□□□ -0.34
EFCAB13-203ENST00000517484 CCDC61Q9Y6R9 512 aa12.9□□□□□ -0.34
EFCAB13-203ENST00000517484 DDX17Q92841 729 aaKnown RBP12.9□□□□□ -0.34
EFCAB13-203ENST00000517484 B4GALNT3Q6L9W6 998 aa12.89□□□□□ -0.35
EFCAB13-203ENST00000517484 EMILIN1Q9Y6C2 1016 aa12.89□□□□□ -0.35
EFCAB13-203ENST00000517484 NLRP6P59044 892 aa12.89□□□□□ -0.35
EFCAB13-203ENST00000517484 RICTORQ6R327 1708 aa12.89□□□□□ -0.35
EFCAB13-203ENST00000517484 FYB1O15117 783 aa12.89□□□□□ -0.35
EFCAB13-203ENST00000517484 NEFMP07197 916 aa12.89□□□□□ -0.35
EFCAB13-203ENST00000517484 PSME1Q06323 249 aa12.88□□□□□ -0.35
EFCAB13-203ENST00000517484 COG3Q96JB2 828 aa12.88□□□□□ -0.35
EFCAB13-203ENST00000517484 BCL2L13Q9BXK5 485 aa12.88□□□□□ -0.35
EFCAB13-203ENST00000517484 SPHKAPQ2M3C7 1700 aa12.88□□□□□ -0.35
EFCAB13-203ENST00000517484 PIK3C2GO75747 1445 aa12.88□□□□□ -0.35
EFCAB13-203ENST00000517484 CANXP27824 592 aaKnown RBP12.87□□□□□ -0.35
EFCAB13-203ENST00000517484 A2ML1A8K2U0 1454 aa12.87□□□□□ -0.35
EFCAB13-203ENST00000517484 ELL2O00472 640 aaPredicted RBP12.87□□□□□ -0.35
EFCAB13-203ENST00000517484 CLTCQ00610 1675 aaKnown RBP12.87□□□□□ -0.35
EFCAB13-203ENST00000517484 ABTB2Q8N961 1025 aa12.86□□□□□ -0.35
EFCAB13-203ENST00000517484 TCERG1O14776 1098 aaKnown RBP12.86□□□□□ -0.35
EFCAB13-203ENST00000517484 FRAT1Q92837 279 aaPredicted RBP12.86□□□□□ -0.35
EFCAB13-203ENST00000517484 NUDCQ9Y266 331 aa12.86□□□□□ -0.35
EFCAB13-203ENST00000517484 ACEP12821 1306 aa12.85□□□□□ -0.35
EFCAB13-203ENST00000517484 HAP1P54257 671 aaPredicted RBP12.85□□□□□ -0.35
EFCAB13-203ENST00000517484 ROBO2Q9HCK4 1378 aa12.85□□□□□ -0.35
EFCAB13-203ENST00000517484 ARHGAP31Q2M1Z3 1444 aa12.85□□□□□ -0.35
EFCAB13-203ENST00000517484 AMPHP49418 695 aa12.85□□□□□ -0.35
EFCAB13-203ENST00000517484 MAPK8IP3Q9UPT6 1336 aa12.84□□□□□ -0.35
EFCAB13-203ENST00000517484 SYNMO15061 1565 aa12.84□□□□□ -0.35
EFCAB13-203ENST00000517484 ORAI2Q96SN7 254 aa12.84□□□□□ -0.35
EFCAB13-203ENST00000517484 A0A1W2PP64 1363 aa12.84□□□□□ -0.35
EFCAB13-203ENST00000517484 KIF13AQ9H1H9 1805 aa12.83□□□□□ -0.36
EFCAB13-203ENST00000517484 CAMSAP1Q5T5Y3 1602 aa12.83□□□□□ -0.36
EFCAB13-203ENST00000517484 VWDEQ8N2E2 1590 aa12.83□□□□□ -0.36
EFCAB13-203ENST00000517484 A0A0G2JS52 829 aa12.83□□□□□ -0.36
EFCAB13-203ENST00000517484 THUMPD2Q9BTF0 503 aaKnown RBP12.83□□□□□ -0.36
EFCAB13-203ENST00000517484 TCP11L2Q8N4U5 519 aa12.82□□□□□ -0.36
EFCAB13-203ENST00000517484 BRD4O60885 1362 aaPredicted RBP12.82□□□□□ -0.36
EFCAB13-203ENST00000517484 MADDQ8WXG6 1647 aa12.82□□□□□ -0.36
EFCAB13-203ENST00000517484 KIF1BO60333 1816 aa12.81□□□□□ -0.36
EFCAB13-203ENST00000517484 ZBED9Q6R2W3 1325 aa12.81□□□□□ -0.36
EFCAB13-203ENST00000517484 PRR36Q9H6K5 1346 aa12.81□□□□□ -0.36
EFCAB13-203ENST00000517484 TRPM1Q7Z4N2 1603 aa12.81□□□□□ -0.36
EFCAB13-203ENST00000517484 DIAPH1O60610 1272 aaKnown RBP12.81□□□□□ -0.36
EFCAB13-203ENST00000517484 PELP1Q8IZL8 1130 aaKnown RBP12.81□□□□□ -0.36
EFCAB13-203ENST00000517484 LMTK2Q8IWU2 1503 aa12.81□□□□□ -0.36
EFCAB13-203ENST00000517484 EIF2AK4Q9P2K8 1649 aaKnown RBP12.8□□□□□ -0.36
EFCAB13-203ENST00000517484 ATF3P18847 181 aa12.8□□□□□ -0.36
EFCAB13-203ENST00000517484 ZC3H6P61129 1189 aaKnown RBP12.8□□□□□ -0.36
EFCAB13-203ENST00000517484 CLUAP1Q96AJ1 413 aa12.8□□□□□ -0.36
EFCAB13-203ENST00000517484 TBX22Q9Y458 520 aa12.8□□□□□ -0.36
EFCAB13-203ENST00000517484 DEPDC5O75140 1603 aa12.8□□□□□ -0.36
EFCAB13-203ENST00000517484 ADGRB3O60242 1522 aa12.79□□□□□ -0.36
EFCAB13-203ENST00000517484 MROH2AA6NES4 1674 aa12.79□□□□□ -0.36
EFCAB13-203ENST00000517484 CABLES1Q8TDN4 633 aa12.79□□□□□ -0.36
EFCAB13-203ENST00000517484 SIGLEC1Q9BZZ2 1709 aa12.79□□□□□ -0.36
EFCAB13-203ENST00000517484 USHBP1Q8N6Y0 703 aa12.79□□□□□ -0.36
EFCAB13-203ENST00000517484 RCAN3Q9UKA8 241 aa12.79□□□□□ -0.36
EFCAB13-203ENST00000517484 LRPPRCP42704 1394 aaKnown RBP12.79□□□□□ -0.36
EFCAB13-203ENST00000517484 ATAD2Q6PL18 1390 aa12.79□□□□□ -0.36
EFCAB13-203ENST00000517484 PARD3Q8TEW0 1356 aa12.79□□□□□ -0.36
EFCAB13-203ENST00000517484 PPIP5K1Q6PFW1 1433 aa12.78□□□□□ -0.36
EFCAB13-203ENST00000517484 PRKAR2BP31323 418 aa12.78□□□□□ -0.36
EFCAB13-203ENST00000517484 GOLGA2Q08379 1002 aa12.78□□□□□ -0.36
EFCAB13-203ENST00000517484 DCTN1Q14203 1278 aa12.78□□□□□ -0.36
EFCAB13-203ENST00000517484 HSP90AB2PQ58FF8 381 aa12.78□□□□□ -0.36
EFCAB13-203ENST00000517484 ARHGEF40Q8TER5 1519 aa12.78□□□□□ -0.36
EFCAB13-203ENST00000517484 TSR2Q969E8 191 aaKnown RBP12.78□□□□□ -0.36
EFCAB13-203ENST00000517484 CCDC136Q96JN2 1154 aa12.78□□□□□ -0.36
EFCAB13-203ENST00000517484 DMRT2Q9Y5R5 561 aa12.78□□□□□ -0.36
EFCAB13-203ENST00000517484 MYOM2P54296 1465 aa12.77□□□□□ -0.36
EFCAB13-203ENST00000517484 PIK3C2BO00750 1634 aa12.77□□□□□ -0.37
EFCAB13-203ENST00000517484 RIPK4P57078 832 aa12.77□□□□□ -0.37
EFCAB13-203ENST00000517484 ZMYM4Q5VZL5 1548 aa12.77□□□□□ -0.37
EFCAB13-203ENST00000517484 SPINK5Q9NQ38 1064 aaPredicted RBP12.76□□□□□ -0.37
EFCAB13-203ENST00000517484 PHF8Q9UPP1 1060 aa12.76□□□□□ -0.37
EFCAB13-203ENST00000517484 SULT6B1Q6IMI4 303 aa12.76□□□□□ -0.37
EFCAB13-203ENST00000517484 USP35Q9P2H5 1018 aa12.76□□□□□ -0.37
EFCAB13-203ENST00000517484 POLKQ9UBT6 870 aa12.75□□□□□ -0.37
EFCAB13-203ENST00000517484 ABCC11Q96J66 1382 aa12.75□□□□□ -0.37
EFCAB13-203ENST00000517484 AEBP1Q8IUX7 1158 aa12.75□□□□□ -0.37
EFCAB13-203ENST00000517484 NEXMIFQ5QGS0 1516 aa12.75□□□□□ -0.37
EFCAB13-203ENST00000517484 ANKRD36BQ8N2N9 1353 aa12.74□□□□□ -0.37
EFCAB13-203ENST00000517484 KDM4FA0A1W2PPD8 638 aa12.74□□□□□ -0.37
EFCAB13-203ENST00000517484 CSB-PGBD3P0DP91 1061 aa12.74□□□□□ -0.37
EFCAB13-203ENST00000517484 PIP4K2BP78356 416 aa12.74□□□□□ -0.37
EFCAB13-203ENST00000517484 ZNF428Q96B54 188 aa12.74□□□□□ -0.37
EFCAB13-203ENST00000517484 TTC21BQ7Z4L5 1316 aa12.73□□□□□ -0.37
EFCAB13-203ENST00000517484 AGLP35573 1532 aa12.73□□□□□ -0.37
EFCAB13-203ENST00000517484 NECTIN2Q92692 538 aa12.73□□□□□ -0.37
EFCAB13-203ENST00000517484 MIS18AQ9NYP9 233 aa12.73□□□□□ -0.37
EFCAB13-203ENST00000517484 FAM83GA6ND36 823 aa12.73□□□□□ -0.37
EFCAB13-203ENST00000517484 ALKQ9UM73 1620 aa12.73□□□□□ -0.37
EFCAB13-203ENST00000517484 BCAR3O75815 825 aa12.72□□□□□ -0.37
EFCAB13-203ENST00000517484 EXOC6Q8TAG9 804 aa12.72□□□□□ -0.37
EFCAB13-203ENST00000517484 ZNF692Q9BU19 519 aaPredicted RBP12.72□□□□□ -0.37
EFCAB13-203ENST00000517484 PREX1Q8TCU6 1659 aa12.72□□□□□ -0.37
EFCAB13-203ENST00000517484 RUNDC1Q96C34 613 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms