RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 POGZQ7Z3K3 1410 aa13.46□□□□□ -0.25
PCDHGA1-202ENST00000517417 PRAG1Q86YV5 1406 aa13.46□□□□□ -0.25
PCDHGA1-202ENST00000517417 ITSN2Q9NZM3 1697 aa13.46□□□□□ -0.25
PCDHGA1-202ENST00000517417 CCDC141Q6ZP82 1450 aa13.46□□□□□ -0.25
PCDHGA1-202ENST00000517417 LMOD3Q0VAK6 560 aa13.46□□□□□ -0.25
PCDHGA1-202ENST00000517417 HMMRO75330 724 aa13.46□□□□□ -0.26
PCDHGA1-202ENST00000517417 DZIP1LQ8IYY4 767 aaKnown RBP13.46□□□□□ -0.26
PCDHGA1-202ENST00000517417 C22orf23Q9BZE7 217 aa13.46□□□□□ -0.26
PCDHGA1-202ENST00000517417 CFAP44Q96MT7 982 aa13.45□□□□□ -0.26
PCDHGA1-202ENST00000517417 TCP11L2Q8N4U5 519 aa13.45□□□□□ -0.26
PCDHGA1-202ENST00000517417 NKTRP30414 1462 aaKnown RBP13.44□□□□□ -0.26
PCDHGA1-202ENST00000517417 CFAP70Q5T0N1 1121 aa13.44□□□□□ -0.26
PCDHGA1-202ENST00000517417 KDM5CP41229 1560 aa13.44□□□□□ -0.26
PCDHGA1-202ENST00000517417 CD109Q6YHK3 1445 aa13.44□□□□□ -0.26
PCDHGA1-202ENST00000517417 AAMPQ13685 434 aa13.44□□□□□ -0.26
PCDHGA1-202ENST00000517417 ANKRD45Q5TZF3 282 aa13.43□□□□□ -0.26
PCDHGA1-202ENST00000517417 STAC3Q96MF2 364 aa13.43□□□□□ -0.26
PCDHGA1-202ENST00000517417 TESK2Q96S53 571 aa13.43□□□□□ -0.26
PCDHGA1-202ENST00000517417 DNAJC5Q9H3Z4 198 aa13.43□□□□□ -0.26
PCDHGA1-202ENST00000517417 CDC42BPAQ5VT25 1732 aa13.43□□□□□ -0.26
PCDHGA1-202ENST00000517417 IGHDP01880 384 aa13.43□□□□□ -0.26
PCDHGA1-202ENST00000517417 PLEKHH1Q9ULM0 1364 aa13.43□□□□□ -0.26
PCDHGA1-202ENST00000517417 GGNBP2Q9H3C7 697 aa13.43□□□□□ -0.26
PCDHGA1-202ENST00000517417 NINLQ9Y2I6 1382 aa13.43□□□□□ -0.26
PCDHGA1-202ENST00000517417 MSNP26038 577 aaKnown RBP13.43□□□□□ -0.26
PCDHGA1-202ENST00000517417 ADCY10Q96PN6 1610 aa13.42□□□□□ -0.26
PCDHGA1-202ENST00000517417 PTMSP20962 102 aa13.42□□□□□ -0.26
PCDHGA1-202ENST00000517417 RIPK4P57078 832 aa13.42□□□□□ -0.26
PCDHGA1-202ENST00000517417 GORABQ5T7V8 394 aa13.42□□□□□ -0.26
PCDHGA1-202ENST00000517417 CCDC9Q9Y3X0 531 aaKnown RBP13.42□□□□□ -0.26
PCDHGA1-202ENST00000517417 KDM2BQ8NHM5 1336 aa13.41□□□□□ -0.26
PCDHGA1-202ENST00000517417 DIAPH1O60610 1272 aaKnown RBP13.41□□□□□ -0.26
PCDHGA1-202ENST00000517417 WWC1Q8IX03 1113 aa13.41□□□□□ -0.26
PCDHGA1-202ENST00000517417 DDX19BQ9UMR2 479 aa13.41□□□□□ -0.26
PCDHGA1-202ENST00000517417 ADGRL2O95490 1459 aa13.41□□□□□ -0.26
PCDHGA1-202ENST00000517417 NECTIN2Q92692 538 aa13.41□□□□□ -0.26
PCDHGA1-202ENST00000517417 TRAK2O60296 914 aa13.41□□□□□ -0.26
PCDHGA1-202ENST00000517417 CHMP4AQ9BY43 222 aa13.41□□□□□ -0.26
PCDHGA1-202ENST00000517417 CABP2Q9NPB3 220 aa13.4□□□□□ -0.26
PCDHGA1-202ENST00000517417 HSP90AA2PQ14568 343 aaPredicted RBP13.4□□□□□ -0.26
PCDHGA1-202ENST00000517417 MTHFSP49914 203 aa13.4□□□□□ -0.27
PCDHGA1-202ENST00000517417 BCORL1Q5H9F3 1711 aa13.39□□□□□ -0.27
PCDHGA1-202ENST00000517417 HMOX1P09601 288 aa13.39□□□□□ -0.27
PCDHGA1-202ENST00000517417 ISY1Q9ULR0 285 aaKnown RBP13.39□□□□□ -0.27
PCDHGA1-202ENST00000517417 MBD5Q9P267 1494 aa13.39□□□□□ -0.27
PCDHGA1-202ENST00000517417 FAM135AQ9P2D6 1515 aa13.39□□□□□ -0.27
PCDHGA1-202ENST00000517417 COL17A1Q9UMD9 1497 aaPredicted RBP13.39□□□□□ -0.27
PCDHGA1-202ENST00000517417 FOXD4L5Q5VV16 416 aaPredicted RBP13.39□□□□□ -0.27
PCDHGA1-202ENST00000517417 FOXD4L4Q8WXT5 416 aaPredicted RBP13.39□□□□□ -0.27
PCDHGA1-202ENST00000517417 AMER1Q5JTC6 1135 aaPredicted RBP13.38□□□□□ -0.27
PCDHGA1-202ENST00000517417 BLMP54132 1417 aaPredicted RBP13.38□□□□□ -0.27
PCDHGA1-202ENST00000517417 TAF7LQ5H9L4 462 aa13.38□□□□□ -0.27
PCDHGA1-202ENST00000517417 ABCC2Q92887 1545 aa13.38□□□□□ -0.27
PCDHGA1-202ENST00000517417 EIF2S2P20042 333 aaKnown RBP13.38□□□□□ -0.27
PCDHGA1-202ENST00000517417 MRE11P49959 708 aa13.38□□□□□ -0.27
PCDHGA1-202ENST00000517417 ZMYM4Q5VZL5 1548 aa13.38□□□□□ -0.27
PCDHGA1-202ENST00000517417 GNL2Q13823 731 aaKnown RBP13.38□□□□□ -0.27
PCDHGA1-202ENST00000517417 SCAPERQ9BY12 1400 aa13.37□□□□□ -0.27
PCDHGA1-202ENST00000517417 DRC7Q8IY82 874 aa13.37□□□□□ -0.27
PCDHGA1-202ENST00000517417 LNPKQ9C0E8 428 aa13.37□□□□□ -0.27
PCDHGA1-202ENST00000517417 MCM4P33991 863 aa13.37□□□□□ -0.27
PCDHGA1-202ENST00000517417 RILPL2Q969X0 211 aa13.37□□□□□ -0.27
PCDHGA1-202ENST00000517417 TEFQ10587 303 aa13.37□□□□□ -0.27
PCDHGA1-202ENST00000517417 TTC37Q6PGP7 1564 aa13.37□□□□□ -0.27
PCDHGA1-202ENST00000517417 SHROOM2Q13796 1616 aa13.37□□□□□ -0.27
PCDHGA1-202ENST00000517417 SYCP2Q9BX26 1530 aa13.36□□□□□ -0.27
PCDHGA1-202ENST00000517417 RARSP54136 660 aaKnown RBP13.36□□□□□ -0.27
PCDHGA1-202ENST00000517417 TBC1D2Q9BYX2 928 aa13.36□□□□□ -0.27
PCDHGA1-202ENST00000517417 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.36□□□□□ -0.27
PCDHGA1-202ENST00000517417 SHANK2Q9UPX8 1470 aa13.35□□□□□ -0.27
PCDHGA1-202ENST00000517417 SKOR2Q2VWA4 1001 aaPredicted RBP13.35□□□□□ -0.27
PCDHGA1-202ENST00000517417 SLC12A5Q9H2X9 1139 aa13.35□□□□□ -0.27
PCDHGA1-202ENST00000517417 ADGBQ8N7X0 1667 aa13.35□□□□□ -0.27
PCDHGA1-202ENST00000517417 SAMD9LQ8IVG5 1584 aa13.35□□□□□ -0.27
PCDHGA1-202ENST00000517417 MVPQ14764 893 aaKnown RBP13.35□□□□□ -0.27
PCDHGA1-202ENST00000517417 TSR2Q969E8 191 aaKnown RBP13.35□□□□□ -0.27
PCDHGA1-202ENST00000517417 HDAC5Q9UQL6 1122 aa13.35□□□□□ -0.27
PCDHGA1-202ENST00000517417 WDR63Q8IWG1 891 aa13.35□□□□□ -0.27
PCDHGA1-202ENST00000517417 GPATCH3Q96I76 525 aa13.34□□□□□ -0.27
PCDHGA1-202ENST00000517417 DDX49Q9Y6V7 483 aaKnown RBP13.34□□□□□ -0.27
PCDHGA1-202ENST00000517417 EXOSC9Q06265 439 aaKnown RBP13.34□□□□□ -0.27
PCDHGA1-202ENST00000517417 NUTM2GQ5VZR2 741 aa13.34□□□□□ -0.27
PCDHGA1-202ENST00000517417 SPINK5Q9NQ38 1064 aaPredicted RBP13.34□□□□□ -0.27
PCDHGA1-202ENST00000517417 NRDCO43847 1150 aa13.33□□□□□ -0.27
PCDHGA1-202ENST00000517417 FOXD4L6Q3SYB3 417 aaPredicted RBP13.33□□□□□ -0.27
PCDHGA1-202ENST00000517417 FOXD4L3Q6VB84 417 aaPredicted RBP13.33□□□□□ -0.27
PCDHGA1-202ENST00000517417 VSIG10Q8N0Z9 540 aa13.33□□□□□ -0.27
PCDHGA1-202ENST00000517417 CDC42BPBQ9Y5S2 1711 aa13.33□□□□□ -0.27
PCDHGA1-202ENST00000517417 SEC24BO95487 1268 aa13.33□□□□□ -0.28
PCDHGA1-202ENST00000517417 GOLGA6L6A8MZA4 724 aa13.33□□□□□ -0.28
PCDHGA1-202ENST00000517417 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.33□□□□□ -0.28
PCDHGA1-202ENST00000517417 INSRP06213 1382 aa13.33□□□□□ -0.28
PCDHGA1-202ENST00000517417 SCAF11Q99590 1463 aaKnown RBP13.33□□□□□ -0.28
PCDHGA1-202ENST00000517417 C1orf141Q5JVX7 400 aa13.32□□□□□ -0.28
PCDHGA1-202ENST00000517417 A2MP01023 1474 aa13.32□□□□□ -0.28
PCDHGA1-202ENST00000517417 CLASP1Q7Z460 1538 aa13.32□□□□□ -0.28
PCDHGA1-202ENST00000517417 CROCC2H7BZ55 1655 aa13.32□□□□□ -0.28
PCDHGA1-202ENST00000517417 ASXL1Q8IXJ9 1541 aa13.32□□□□□ -0.28
PCDHGA1-202ENST00000517417 TBC1D32Q96NH3 1257 aa13.32□□□□□ -0.28
PCDHGA1-202ENST00000517417 PSME1Q06323 249 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms