RNA–Protein interactions for RNA: ENST00000517097.1

SCARNA3-201, small Cajal body-specific RNA 3, humanhuman

BASIC

Gene SCARNA3, Length 143 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA3-201ENST00000517097 QPCTQ16769 361 aa4.08□□□□□ -1.76
SCARNA3-201ENST00000517097 WASHC4Q2M389 1173 aa4.08□□□□□ -1.76
SCARNA3-201ENST00000517097 RTL5Q5HYW3 569 aaPredicted RBP4.08□□□□□ -1.76
SCARNA3-201ENST00000517097 TYW1BQ6NUM6 668 aa4.08□□□□□ -1.76
SCARNA3-201ENST00000517097 RSBN1LQ6PCB5 846 aaPredicted RBP4.08□□□□□ -1.76
SCARNA3-201ENST00000517097 PPP1R12CQ9BZL4 782 aa4.08□□□□□ -1.76
SCARNA3-201ENST00000517097 MOXD2PA6NHM9 499 aa4.07□□□□□ -1.76
SCARNA3-201ENST00000517097 CD46P15529 392 aa4.07□□□□□ -1.76
SCARNA3-201ENST00000517097 LMOD1P29536 600 aaPredicted RBP4.07□□□□□ -1.76
SCARNA3-201ENST00000517097 PTPN5P54829 565 aa4.07□□□□□ -1.76
SCARNA3-201ENST00000517097 NUTM1Q86Y26 1132 aa4.07□□□□□ -1.76
SCARNA3-201ENST00000517097 TTC13Q8NBP0 860 aa4.07□□□□□ -1.76
SCARNA3-201ENST00000517097 CERKQ8TCT0 537 aa4.07□□□□□ -1.76
SCARNA3-201ENST00000517097 GJD4Q96KN9 370 aaPredicted RBP4.07□□□□□ -1.76
SCARNA3-201ENST00000517097 STAC3Q96MF2 364 aa4.07□□□□□ -1.76
SCARNA3-201ENST00000517097 USP35Q9P2H5 1018 aa4.07□□□□□ -1.76
SCARNA3-201ENST00000517097 PCDHB15Q9Y5E8 787 aa4.07□□□□□ -1.76
SCARNA3-201ENST00000517097 NDUFB9Q9Y6M9 179 aa4.07□□□□□ -1.76
SCARNA3-201ENST00000517097 PALM3A6NDB9 673 aaPredicted RBP4.06□□□□□ -1.76
SCARNA3-201ENST00000517097 UNCXA6NJT0 531 aa4.06□□□□□ -1.76
SCARNA3-201ENST00000517097 TMEM88BA6NKF7 163 aa4.06□□□□□ -1.76
SCARNA3-201ENST00000517097 ATG7O95352 703 aa4.06□□□□□ -1.76
SCARNA3-201ENST00000517097 COL9A1P20849 921 aa4.06□□□□□ -1.76
SCARNA3-201ENST00000517097 GJA5P36382 358 aa4.06□□□□□ -1.76
SCARNA3-201ENST00000517097 PROX2Q3B8N5 592 aa4.06□□□□□ -1.76
SCARNA3-201ENST00000517097 RBM46Q8TBY0 533 aaKnown RBP4.06□□□□□ -1.76
SCARNA3-201ENST00000517097 RBM27Q9P2N5 1060 aaKnown RBP4.06□□□□□ -1.76
SCARNA3-201ENST00000517097 NUTM2BA6NNL0 878 aaPredicted RBP4.05□□□□□ -1.76
SCARNA3-201ENST00000517097 NUTM2EB1AL46 878 aaPredicted RBP4.05□□□□□ -1.76
SCARNA3-201ENST00000517097 PPP1R3GB7ZBB8 358 aa4.05□□□□□ -1.76
SCARNA3-201ENST00000517097 HMGB1P09429 215 aaKnown RBP4.05□□□□□ -1.76
SCARNA3-201ENST00000517097 NDUFV2P19404 249 aa4.05□□□□□ -1.76
SCARNA3-201ENST00000517097 VAC14Q08AM6 782 aa4.05□□□□□ -1.76
SCARNA3-201ENST00000517097 CDCA8Q53HL2 280 aa4.05□□□□□ -1.76
SCARNA3-201ENST00000517097 C6orf132Q5T0Z8 1188 aa4.05□□□□□ -1.76
SCARNA3-201ENST00000517097 NUTM2DQ5VT03 806 aaPredicted RBP4.05□□□□□ -1.76
SCARNA3-201ENST00000517097 THSD4Q6ZMP0 1018 aa4.05□□□□□ -1.76
SCARNA3-201ENST00000517097 NUTM2AQ8IVF1 878 aaPredicted RBP4.05□□□□□ -1.76
SCARNA3-201ENST00000517097 MRPL50Q8N5N7 158 aaKnown RBP4.05□□□□□ -1.76
SCARNA3-201ENST00000517097 CABLES1Q8TDN4 633 aa4.05□□□□□ -1.76
SCARNA3-201ENST00000517097 ALG2Q9H553 416 aa4.05□□□□□ -1.76
SCARNA3-201ENST00000517097 IGSF5Q9NSI5 407 aa4.05□□□□□ -1.76
SCARNA3-201ENST00000517097 TFIP11Q9UBB9 837 aaKnown RBP4.05□□□□□ -1.76
SCARNA3-201ENST00000517097 GNEQ9Y223 722 aaKnown RBP4.05□□□□□ -1.76
SCARNA3-201ENST00000517097 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.04□□□□□ -1.76
SCARNA3-201ENST00000517097 RBM47A0AV96 593 aaKnown RBP4.04□□□□□ -1.76
SCARNA3-201ENST00000517097 GPR37L1O60883 481 aa4.04□□□□□ -1.76
SCARNA3-201ENST00000517097 HSP90B1P14625 803 aaKnown RBP4.04□□□□□ -1.76
SCARNA3-201ENST00000517097 WNT2BQ93097 391 aa4.04□□□□□ -1.76
SCARNA3-201ENST00000517097 PUS7Q96PZ0 661 aaKnown RBP4.04□□□□□ -1.76
SCARNA3-201ENST00000517097 RCCD1A6NED2 376 aa4.03□□□□□ -1.76
SCARNA3-201ENST00000517097 GOLGA8CPA6NN73 597 aa4.03□□□□□ -1.76
SCARNA3-201ENST00000517097 PRSS12P56730 875 aa4.03□□□□□ -1.76
SCARNA3-201ENST00000517097 RSPH4AQ5TD94 716 aa4.03□□□□□ -1.76
SCARNA3-201ENST00000517097 PRPF38BQ5VTL8 546 aaKnown RBP4.03□□□□□ -1.76
SCARNA3-201ENST00000517097 SULF1Q8IWU6 871 aa4.03□□□□□ -1.76
SCARNA3-201ENST00000517097 UCN2Q96RP3 112 aa4.03□□□□□ -1.76
SCARNA3-201ENST00000517097 TRIM34Q9BYJ4 488 aa4.03□□□□□ -1.76
SCARNA3-201ENST00000517097 NBPF3Q9H094 633 aa4.03□□□□□ -1.76
SCARNA3-201ENST00000517097 DDX11L8A8MPP1 907 aa4.02□□□□□ -1.77
SCARNA3-201ENST00000517097 CTDSPL2Q05D32 466 aa4.02□□□□□ -1.77
SCARNA3-201ENST00000517097 PRR7Q8TB68 274 aa4.02□□□□□ -1.77
SCARNA3-201ENST00000517097 CDCA7LQ96GN5 454 aa4.02□□□□□ -1.77
SCARNA3-201ENST00000517097 ZBTB3Q9H5J0 574 aa4.02□□□□□ -1.77
SCARNA3-201ENST00000517097 HMX1Q9NP08 348 aaPredicted RBP4.02□□□□□ -1.77
SCARNA3-201ENST00000517097 RABGEF1Q9UJ41 708 aa4.02□□□□□ -1.77
SCARNA3-201ENST00000517097 CDK11BP21127 795 aaKnown RBP4.01□□□□□ -1.77
SCARNA3-201ENST00000517097 B4GALNT3Q6L9W6 998 aa4.01□□□□□ -1.77
SCARNA3-201ENST00000517097 CCER1Q8TC90 406 aaPredicted RBP4.01□□□□□ -1.77
SCARNA3-201ENST00000517097 EYA1Q99502 592 aa4.01□□□□□ -1.77
SCARNA3-201ENST00000517097 CDK11AQ9UQ88 783 aaPredicted RBP4.01□□□□□ -1.77
SCARNA3-201ENST00000517097 MAFBQ9Y5Q3 323 aaPredicted RBP4.01□□□□□ -1.77
SCARNA3-201ENST00000517097 SOX11P35716 441 aa4□□□□□ -1.77
SCARNA3-201ENST00000517097 BCAMP50895 628 aa4□□□□□ -1.77
SCARNA3-201ENST00000517097 SEMA3FQ13275 785 aa4□□□□□ -1.77
SCARNA3-201ENST00000517097 TBC1D9Q6ZT07 1266 aa4□□□□□ -1.77
SCARNA3-201ENST00000517097 TXNDC2Q86VQ3 553 aa4□□□□□ -1.77
SCARNA3-201ENST00000517097 MRRFQ96E11 262 aaKnown RBP4□□□□□ -1.77
SCARNA3-201ENST00000517097 KIAA1522Q9P206 1035 aaPredicted RBP4□□□□□ -1.77
SCARNA3-201ENST00000517097 KIAA1468Q9P260 1216 aa4□□□□□ -1.77
SCARNA3-201ENST00000517097 FAM198AQ9UFP1 575 aa4□□□□□ -1.77
SCARNA3-201ENST00000517097 SEPT9Q9UHD8 586 aaPredicted RBP4□□□□□ -1.77
SCARNA3-201ENST00000517097 SOWAHBA6NEL2 793 aa3.99□□□□□ -1.77
SCARNA3-201ENST00000517097 TRIM6-TRIM34B2RNG4 842 aa3.99□□□□□ -1.77
SCARNA3-201ENST00000517097 ATP9BO43861 1147 aa3.99□□□□□ -1.77
SCARNA3-201ENST00000517097 KDM4AO75164 1064 aa3.99□□□□□ -1.77
SCARNA3-201ENST00000517097 FDX1P10109 184 aa3.99□□□□□ -1.77
SCARNA3-201ENST00000517097 ERCC3P19447 782 aa3.99□□□□□ -1.77
SCARNA3-201ENST00000517097 DNAJB2P25686 324 aa3.99□□□□□ -1.77
SCARNA3-201ENST00000517097 ELOAQ14241 798 aaKnown RBP3.99□□□□□ -1.77
SCARNA3-201ENST00000517097 IFFO2Q5TF58 517 aa3.99□□□□□ -1.77
SCARNA3-201ENST00000517097 TMEM164Q5U3C3 297 aa3.99□□□□□ -1.77
SCARNA3-201ENST00000517097 DNAJC14Q6Y2X3 702 aaPredicted RBP3.99□□□□□ -1.77
SCARNA3-201ENST00000517097 LAPTM4BQ86VI4 370 aa3.99□□□□□ -1.77
SCARNA3-201ENST00000517097 ANKK1Q8NFD2 765 aa3.99□□□□□ -1.77
SCARNA3-201ENST00000517097 EPS8L1Q8TE68 723 aa3.99□□□□□ -1.77
SCARNA3-201ENST00000517097 LRRN4Q8WUT4 740 aa3.99□□□□□ -1.77
SCARNA3-201ENST00000517097 A0A0G2JS52 829 aa3.98□□□□□ -1.77
SCARNA3-201ENST00000517097 HOXA2O43364 376 aa3.98□□□□□ -1.77
SCARNA3-201ENST00000517097 KANK4Q5T7N3 995 aaPredicted RBP3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms