RNA–Protein interactions for RNA: ENST00000516918.1

SCARNA11.1-201, small Cajal body-specific RNA 11, humanhuman

BASIC

Gene SCARNA11, Length 132 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA11.1-201ENST00000516918 RPGRIP1LQ68CZ1 1315 aa10.54□□□□□ -0.72
SCARNA11.1-201ENST00000516918 FOXD1Q16676 465 aa10.53□□□□□ -0.72
SCARNA11.1-201ENST00000516918 WAPLQ7Z5K2 1190 aa10.53□□□□□ -0.72
SCARNA11.1-201ENST00000516918 ZRANB1Q9UGI0 708 aa10.53□□□□□ -0.72
SCARNA11.1-201ENST00000516918 NPHP3Q7Z494 1330 aa10.53□□□□□ -0.72
SCARNA11.1-201ENST00000516918 HFM1A2PYH4 1435 aa10.52□□□□□ -0.73
SCARNA11.1-201ENST00000516918 KIF1BO60333 1816 aa10.52□□□□□ -0.73
SCARNA11.1-201ENST00000516918 ADGRF5Q8IZF2 1346 aa10.52□□□□□ -0.73
SCARNA11.1-201ENST00000516918 RGL3Q3MIN7 710 aa10.51□□□□□ -0.73
SCARNA11.1-201ENST00000516918 LAMC1P11047 1609 aa10.51□□□□□ -0.73
SCARNA11.1-201ENST00000516918 MYOM2P54296 1465 aa10.5□□□□□ -0.73
SCARNA11.1-201ENST00000516918 BCL9LQ86UU0 1499 aa10.5□□□□□ -0.73
SCARNA11.1-201ENST00000516918 PLEKHG5O94827 1062 aa10.5□□□□□ -0.73
SCARNA11.1-201ENST00000516918 TMEM132EQ6IEE7 984 aa10.5□□□□□ -0.73
SCARNA11.1-201ENST00000516918 GJD4Q96KN9 370 aaPredicted RBP10.5□□□□□ -0.73
SCARNA11.1-201ENST00000516918 RRBP1Q9P2E9 1410 aaKnown RBP10.5□□□□□ -0.73
SCARNA11.1-201ENST00000516918 PLEKHH1Q9ULM0 1364 aa10.49□□□□□ -0.73
SCARNA11.1-201ENST00000516918 PRAG1Q86YV5 1406 aa10.49□□□□□ -0.73
SCARNA11.1-201ENST00000516918 PXDNQ92626 1479 aa10.49□□□□□ -0.73
SCARNA11.1-201ENST00000516918 CCDC125Q86Z20 511 aa10.48□□□□□ -0.73
SCARNA11.1-201ENST00000516918 UNC5CLQ8IV45 518 aa10.48□□□□□ -0.73
SCARNA11.1-201ENST00000516918 LRPPRCP42704 1394 aaKnown RBP10.48□□□□□ -0.73
SCARNA11.1-201ENST00000516918 COL22A1Q8NFW1 1626 aaPredicted RBP10.47□□□□□ -0.73
SCARNA11.1-201ENST00000516918 HAP1P54257 671 aaPredicted RBP10.46□□□□□ -0.73
SCARNA11.1-201ENST00000516918 KRT28Q7Z3Y7 464 aa10.46□□□□□ -0.73
SCARNA11.1-201ENST00000516918 CABLES1Q8TDN4 633 aa10.46□□□□□ -0.73
SCARNA11.1-201ENST00000516918 SPATA31A3Q5VYP0 1347 aa10.46□□□□□ -0.73
SCARNA11.1-201ENST00000516918 CDC42BPGQ6DT37 1551 aa10.46□□□□□ -0.74
SCARNA11.1-201ENST00000516918 PPLO60437 1756 aa10.45□□□□□ -0.74
SCARNA11.1-201ENST00000516918 ABCC11Q96J66 1382 aa10.45□□□□□ -0.74
SCARNA11.1-201ENST00000516918 DEFB132Q7Z7B7 95 aa10.45□□□□□ -0.74
SCARNA11.1-201ENST00000516918 RALGAPBQ86X10 1494 aa10.44□□□□□ -0.74
SCARNA11.1-201ENST00000516918 CCDC144AA2RUR9 1427 aa10.44□□□□□ -0.74
SCARNA11.1-201ENST00000516918 SRCAPQ6ZRS2 3230 aa10.44□□□□□ -0.74
SCARNA11.1-201ENST00000516918 LMOD2Q6P5Q4 547 aa10.44□□□□□ -0.74
SCARNA11.1-201ENST00000516918 SEPT12Q8IYM1 358 aa10.44□□□□□ -0.74
SCARNA11.1-201ENST00000516918 CCDC9Q9Y3X0 531 aaKnown RBP10.44□□□□□ -0.74
SCARNA11.1-201ENST00000516918 SLIT2O94813 1529 aa10.43□□□□□ -0.74
SCARNA11.1-201ENST00000516918 TECPR2O15040 1411 aa10.43□□□□□ -0.74
SCARNA11.1-201ENST00000516918 ANKRD30BQ9BXX2 1392 aa10.43□□□□□ -0.74
SCARNA11.1-201ENST00000516918 SAFB2Q14151 953 aaKnown RBP eCLIP10.43□□□□□ -0.74
SCARNA11.1-201ENST00000516918 MPHOSPH9Q99550 1183 aa10.43□□□□□ -0.74
SCARNA11.1-201ENST00000516918 PHF8Q9UPP1 1060 aa10.43□□□□□ -0.74
SCARNA11.1-201ENST00000516918 BLMP54132 1417 aaPredicted RBP10.42□□□□□ -0.74
SCARNA11.1-201ENST00000516918 SPATA31E1Q6ZUB1 1445 aa10.42□□□□□ -0.74
SCARNA11.1-201ENST00000516918 YTHDC2Q9H6S0 1430 aaKnown RBP10.42□□□□□ -0.74
SCARNA11.1-201ENST00000516918 SF3B2Q13435 895 aaKnown RBP10.42□□□□□ -0.74
SCARNA11.1-201ENST00000516918 GLI3P10071 1580 aa10.42□□□□□ -0.74
SCARNA11.1-201ENST00000516918 PSME1Q06323 249 aa10.41□□□□□ -0.74
SCARNA11.1-201ENST00000516918 VPS72Q15906 364 aa10.41□□□□□ -0.74
SCARNA11.1-201ENST00000516918 CFAP70Q5T0N1 1121 aa10.41□□□□□ -0.74
SCARNA11.1-201ENST00000516918 A0A0G2JS52 829 aa10.4□□□□□ -0.74
SCARNA11.1-201ENST00000516918 MYT1Q01538 1121 aa10.4□□□□□ -0.74
SCARNA11.1-201ENST00000516918 PMFBP1Q8TBY8 1022 aa10.4□□□□□ -0.74
SCARNA11.1-201ENST00000516918 C14orf93Q9H972 538 aaKnown RBP10.4□□□□□ -0.74
SCARNA11.1-201ENST00000516918 MARF1Q9Y4F3 1742 aaKnown RBP10.4□□□□□ -0.74
SCARNA11.1-201ENST00000516918 PIK3C2GO75747 1445 aa10.4□□□□□ -0.75
SCARNA11.1-201ENST00000516918 TNS3Q68CZ2 1445 aa10.4□□□□□ -0.75
SCARNA11.1-201ENST00000516918 FAM83GA6ND36 823 aa10.39□□□□□ -0.75
SCARNA11.1-201ENST00000516918 KRT27Q7Z3Y8 459 aa10.39□□□□□ -0.75
SCARNA11.1-201ENST00000516918 SIRT1Q96EB6 747 aa10.39□□□□□ -0.75
SCARNA11.1-201ENST00000516918 PRAM1Q96QH2 718 aa10.39□□□□□ -0.75
SCARNA11.1-201ENST00000516918 USP32Q8NFA0 1604 aa10.38□□□□□ -0.75
SCARNA11.1-201ENST00000516918 PSDA5PKW4 1024 aaPredicted RBP10.38□□□□□ -0.75
SCARNA11.1-201ENST00000516918 ONECUT3O60422 494 aaPredicted RBP10.38□□□□□ -0.75
SCARNA11.1-201ENST00000516918 POGKQ9P215 609 aa10.38□□□□□ -0.75
SCARNA11.1-201ENST00000516918 FMN2Q9NZ56 1722 aa10.38□□□□□ -0.75
SCARNA11.1-201ENST00000516918 DHX57Q6P158 1386 aaKnown RBP10.38□□□□□ -0.75
SCARNA11.1-201ENST00000516918 FAM98CQ17RN3 349 aaKnown RBP10.37□□□□□ -0.75
SCARNA11.1-201ENST00000516918 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.37□□□□□ -0.75
SCARNA11.1-201ENST00000516918 KIF1AQ12756 1690 aa10.37□□□□□ -0.75
SCARNA11.1-201ENST00000516918 SBNO1A3KN83 1393 aa10.37□□□□□ -0.75
SCARNA11.1-201ENST00000516918 EP400Q96L91 3159 aa10.36□□□□□ -0.75
SCARNA11.1-201ENST00000516918 BRWD3Q6RI45 1802 aa10.36□□□□□ -0.75
SCARNA11.1-201ENST00000516918 FAM182BQ5T319 152 aa10.36□□□□□ -0.75
SCARNA11.1-201ENST00000516918 HIRIP3Q9BW71 556 aaPredicted RBP10.36□□□□□ -0.75
SCARNA11.1-201ENST00000516918 ARHGEF10O15013 1369 aa10.36□□□□□ -0.75
SCARNA11.1-201ENST00000516918 NRXN1Q9ULB1 1477 aa10.36□□□□□ -0.75
SCARNA11.1-201ENST00000516918 KNDC1Q76NI1 1749 aa10.36□□□□□ -0.75
SCARNA11.1-201ENST00000516918 BAG6P46379 1132 aa10.35□□□□□ -0.75
SCARNA11.1-201ENST00000516918 BTG4Q9NY30 223 aa10.35□□□□□ -0.75
SCARNA11.1-201ENST00000516918 TRAK1Q9UPV9 953 aa10.35□□□□□ -0.75
SCARNA11.1-201ENST00000516918 MINK1Q8N4C8 1332 aaPredicted RBP10.34□□□□□ -0.75
SCARNA11.1-201ENST00000516918 RGPD8O14715 1765 aaPredicted RBP10.34□□□□□ -0.75
SCARNA11.1-201ENST00000516918 IFT172Q9UG01 1749 aa10.34□□□□□ -0.75
SCARNA11.1-201ENST00000516918 EN1Q05925 392 aaPredicted RBP10.34□□□□□ -0.75
SCARNA11.1-201ENST00000516918 HRCP23327 699 aa10.33□□□□□ -0.76
SCARNA11.1-201ENST00000516918 GPRASP1Q5JY77 1395 aa10.32□□□□□ -0.76
SCARNA11.1-201ENST00000516918 PAK3O75914 559 aaPredicted RBP10.32□□□□□ -0.76
SCARNA11.1-201ENST00000516918 KDM2AQ9Y2K7 1162 aa10.32□□□□□ -0.76
SCARNA11.1-201ENST00000516918 ANKARQ7Z5J8 1434 aa10.32□□□□□ -0.76
SCARNA11.1-201ENST00000516918 PRR36Q9H6K5 1346 aa10.32□□□□□ -0.76
SCARNA11.1-201ENST00000516918 PLCH1Q4KWH8 1693 aa10.31□□□□□ -0.76
SCARNA11.1-201ENST00000516918 R3HDM1Q15032 1099 aaKnown RBP10.31□□□□□ -0.76
SCARNA11.1-201ENST00000516918 NGDNQ8NEJ9 315 aaKnown RBP10.31□□□□□ -0.76
SCARNA11.1-201ENST00000516918 SPATA31A5Q5VU36 1347 aa10.31□□□□□ -0.76
SCARNA11.1-201ENST00000516918 SPATA31A7Q8IWB4 1347 aa10.31□□□□□ -0.76
SCARNA11.1-201ENST00000516918 ACIN1Q9UKV3 1341 aaKnown RBP10.31□□□□□ -0.76
SCARNA11.1-201ENST00000516918 NWD2Q9ULI1 1742 aa10.3□□□□□ -0.76
SCARNA11.1-201ENST00000516918 PRDM11Q9NQV5 511 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms